Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017832
CDS Infomation

pacid=37427776 polypeptide=PGSC0003DMP400012261 locus=PGSC0003DMG400006925 ID=PGSC0003DMT400017832.v4.03 annot-version=v4.03
Sequence

ATGTCGGTTAACAACAATAATAACCCTAACAAGAATATGGGAGGACCATCCTCCTTTGGC
AATTCGCCGCCGGGTAATCCGATGGCACACCTCCAGGCACAATCACAAGGCCAGCAACAG
ATGCCTTCAGGGTTTCCTGGGGCATTTCAGTTATCACAGCTATCTGCTGCACATGCCCAA
GCAATTGCTCAAGCACAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCTCAAGCTCAA
GCACAAGCTCAAGCGCAAGCTGCTCATGCCCAATTTCAGGCCCAGTTACAGGCTCAGGGT
TTGTCCCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCT
GGAGGTGGTTTGGCAAAACGCTTACCTCAGAAACCTCCGGTGCGTCCACCTGCATTCACA
ACTACTAACACAATTTCTCCAATGAGAACAATGGACCTTTCAGCGGCTGCTCGTAGGAAA
AAGCAGAAGCTTCCTGAGAAGCACATGCACGAGAAGGTGGCAGCTATTTTGCCTGAATCT
TCCCTTTATACTCAGCTCCTTGAGTTTGAATCTCGGGTTGATTCCGCTTTAACAAGAAAG
AAAGTTGACATCCAGGAGTCATTGAAGAATCCACCTACTATTCAGAAGACGCTTCGAATT
TATGTATTCAATAGTTTTGCTAATCAGGTTCGTACGATTCCTAAGAAGCCAAATGCTGAA
CCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGAT
CAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTTTCTACTTTCTTCAAA
AGAGTCACCATTTCCTTGGACCAGAAACTATATCCTGATAACCATATTATAATTTGGGAC
TCTGCGCGATCTCCTGCACCTCAGGATGGTTTTGAGGTCAAAAGAAAGGGCGAGCAAGAG
TTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCA
GCTTTAACTGAAGTTCTGGGTATTGAGGTCGAGACTCGTGCTAGAATTGTCTCTTCTATC
TGGCATTATGTTAAGGCTCGAAAGTTGCAGAACCCTGATGATCCTTCTTACTTCAACTGT
GATCCTCCACTTCAGAAAGTTTTTGGGGAAGGAAAGGTTAAGTTCAATACAGTCACACAA
AAGATCACACCTCATTTGTCTCCTCCACAACCCATACATTTGGAACACAGGATTAAACTT
ATTGGAAATAACCCTGTTGGAACTGCTTGTTATGATGTATTGGTTGATGTGCCATTCCCT
ATCCAGAGGGAGCTGAATGCTCTGCTTGCCAATACCGAAAAGACCAAAGAGATTGAAACT
TGTGATGAAGCAATTTGTTCTGCCATAAGGAAGATCCATGAGCATAGAAGGAGAAGGGCT
TTTTTTCTGGGTTTTAGTCAATCCCCTGTTGAGTTTATTAATGCACTTCTAGAATCCCAG
AGCAAGGATCTGAAAGTTGTTAGTGGGGAGCCAAGTCGCAATGTTGAGAAGGAGCGCCGG
TCTCAGTTTTATAGCCAACCATGGGTTGAGGATGCTGTTATCCGCTACCTGAATCGCAAG
CCAGCTGCTTCTGATGCCCCTGGAAGTGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400012261
PEP Infomation

pacid=37427776 transcript=PGSC0003DMT400017832 locus=PGSC0003DMG400006925 ID=PGSC0003DMT400017832.v4.03 annot-version=v4.03
Sequence

MSVNNNNNPNKNMGGPSSFGNSPPGNPMAHLQAQSQGQQQMPSGFPGAFQLSQLSAAHAQ
AIAQAQSKVQAHAQAQAQAQAQAQAQAAHAQFQAQLQAQGLSLSQAHALGNFGSSSPSMP
GGGLAKRLPQKPPVRPPAFTTTNTISPMRTMDLSAAARRKKQKLPEKHMHEKVAAILPES
SLYTQLLEFESRVDSALTRKKVDIQESLKNPPTIQKTLRIYVFNSFANQVRTIPKKPNAE
PPTWTLKIVGRILEEGMDPDQAAMFQKTSSMYPKFSTFFKRVTISLDQKLYPDNHIIIWD
SARSPAPQDGFEVKRKGEQEFTANLRLELNYMPEKYKLSPALTEVLGIEVETRARIVSSI
WHYVKARKLQNPDDPSYFNCDPPLQKVFGEGKVKFNTVTQKITPHLSPPQPIHLEHRIKL
IGNNPVGTACYDVLVDVPFPIQRELNALLANTEKTKEIETCDEAICSAIRKIHEHRRRRA
FFLGFSQSPVEFINALLESQSKDLKVVSGEPSRNVEKERRSQFYSQPWVEDAVIRYLNRK
PAASDAPGSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400017832
Transcript Infomation

pacid=37427776 locus=PGSC0003DMG400006925 ID=PGSC0003DMT400017832.v4.03 annot-version=v4.03
Sequence

ATGTCGGTTAACAACAATAATAACCCTAACAAGAATATGGGAGGACCATCCTCCTTTGGC
AATTCGCCGCCGGGTAATCCGATGGCACACCTCCAGGCACAATCACAAGGCCAGCAACAG
ATGCCTTCAGGGTTTCCTGGGGCATTTCAGTTATCACAGCTATCTGCTGCACATGCCCAA
GCAATTGCTCAAGCACAGTCGAAAGTTCAGGCTCATGCGCAAGCTCAAGCTCAAGCTCAA
GCACAAGCTCAAGCGCAAGCTGCTCATGCCCAATTTCAGGCCCAGTTACAGGCTCAGGGT
TTGTCCCTTAGCCAGGCTCATGCTCTTGGCAATTTTGGTTCTTCCTCACCCTCGATGCCT
GGAGGTGGTTTGGCAAAACGCTTACCTCAGAAACCTCCGGTGCGTCCACCTGCATTCACA
ACTACTAACACAATTTCTCCAATGAGAACAATGGACCTTTCAGCGGCTGCTCGTAGGAAA
AAGCAGAAGCTTCCTGAGAAGCACATGCACGAGAAGGTGGCAGCTATTTTGCCTGAATCT
TCCCTTTATACTCAGCTCCTTGAGTTTGAATCTCGGGTTGATTCCGCTTTAACAAGAAAG
AAAGTTGACATCCAGGAGTCATTGAAGAATCCACCTACTATTCAGAAGACGCTTCGAATT
TATGTATTCAATAGTTTTGCTAATCAGGTTCGTACGATTCCTAAGAAGCCAAATGCTGAA
CCTCCTACATGGACTCTTAAGATTGTAGGAAGGATTTTGGAGGAGGGAATGGATCCTGAT
CAAGCTGCCATGTTTCAGAAAACTAGCTCCATGTACCCAAAGTTTTCTACTTTCTTCAAA
AGAGTCACCATTTCCTTGGACCAGAAACTATATCCTGATAACCATATTATAATTTGGGAC
TCTGCGCGATCTCCTGCACCTCAGGATGGTTTTGAGGTCAAAAGAAAGGGCGAGCAAGAG
TTCACTGCTAATTTAAGACTAGAATTGAATTACATGCCTGAGAAATACAAACTTTCACCA
GCTTTAACTGAAGTTCTGGGTATTGAGGTCGAGACTCGTGCTAGAATTGTCTCTTCTATC
TGGCATTATGTTAAGGCTCGAAAGTTGCAGAACCCTGATGATCCTTCTTACTTCAACTGT
GATCCTCCACTTCAGAAAGTTTTTGGGGAAGGAAAGGTTAAGTTCAATACAGTCACACAA
AAGATCACACCTCATTTGTCTCCTCCACAACCCATACATTTGGAACACAGGATTAAACTT
ATTGGAAATAACCCTGTTGGAACTGCTTGTTATGATGTATTGGTTGATGTGCCATTCCCT
ATCCAGAGGGAGCTGAATGCTCTGCTTGCCAATACCGAAAAGACCAAAGAGATTGAAACT
TGTGATGAAGCAATTTGTTCTGCCATAAGGAAGATCCATGAGCATAGAAGGAGAAGGGCT
TTTTTTCTGGGTTTTAGTCAATCCCCTGTTGAGTTTATTAATGCACTTCTAGAATCCCAG
AGCAAGGATCTGAAAGTTGTTAGTGGGGAGCCAAGTCGCAATGTTGAGAAGGAGCGCCGG
TCTCAGTTTTATAGCCAACCATGGGTTGAGGATGCTGTTATCCGCTACCTGAATCGCAAG
CCAGCTGCTTCTGATGCCCCTGGAAGTGGATGA