Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017818
CDS Infomation

pacid=37427041 polypeptide=PGSC0003DMP400012248 locus=PGSC0003DMG400006920 ID=PGSC0003DMT400017818.v4.03 annot-version=v4.03
Sequence

ATGGGAGGGGTTACTTCATCAATGGCGGCGAAGTTTGCGTTTTTTCCTCCAAACCCACCT
TCTTATAAGCTTATTAAAGATGATCTCACGGGTCTTTTGCTGCTTAGCCCTTTTCCTCAC
CGTGAAAATGTTGAAGTACTTAAGTTGCCCACTCGTAAAGGTACTGAAATTGTTGCCATG
TATATTAGGCATCCTATGGCTACCTCCACTTTACTGTATTCCCATGGAAATGCGGCTGAC
TTGGGTCAGATGTATGAGCTTTTCATTGAATTGAGCATCCACTTGCGGGTCAATCTCTTG
GGGTATGACTACTCTGGGTATGGACAGTCAACTGGTAAGCCAAGTGAGCAGAATACCTAT
GCAGATATTGAAGCTGCATATAAGTGCCTTGAAGAAAACTATGGCACAAAGCAGGAAGAT
GTTATACTTTATGGCCAATCAGTTGGTAGTGGGCCTACTTTGGATCTTGCAGCTCGTCTA
CCACGATTAAGATCAGTCATTCTGCACAGTCCCCTTCTTTCAGGTTTACGAGTCATGTAT
CCTGTCAAGCGCACGTACTGGTTTGACATTTACAAGAATATTGACAAGATCCCTTCGGTT
AATTGTCCCGTGCTCATCATTCATGGAACTGCAGATGAAGTAGTTGATTTTTCACATGGC
AAGCAACTCTGGGAATTATGCAAGGAGAAGTATGAGCCTTTATGGATCAAGGGAGGGAAC
CATTGCGACTTGGAGCTCTATCCAGAATATATCAGACACCTAAAGAAGTTTGTAGCAACT
ATTGAAAGGTCCCAATCACAAAGGATCAGTTCTAGGAAAAGCACAGACCAGCAGTTTGAG
CCACCAAGAAAGAGTACAGATGTTTTTGAAGCTTCAAGGAAAAGCAGTGACCGTAGAGAA
AAACCGAGACACAGCACAGACAGGCCTGAGAAGTTAAAGAATCATTCCAGTAATGCTATT
ACAGACAAACTAGAAAAACTAAGGATCTCTTTTGAACAAATGGAGAGATCTCGGAGAAGT
GTGGACTGCACTGAAAAATCAAGGAGAAGCATCGATCACCAATTAGAAAGAGCCCGGAAG
AGTGTTGATAGAATGGAGAGAATACGAACTGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012248
PEP Infomation

pacid=37427041 transcript=PGSC0003DMT400017818 locus=PGSC0003DMG400006920 ID=PGSC0003DMT400017818.v4.03 annot-version=v4.03
Sequence

MGGVTSSMAAKFAFFPPNPPSYKLIKDDLTGLLLLSPFPHRENVEVLKLPTRKGTEIVAM
YIRHPMATSTLLYSHGNAADLGQMYELFIELSIHLRVNLLGYDYSGYGQSTGKPSEQNTY
ADIEAAYKCLEENYGTKQEDVILYGQSVGSGPTLDLAARLPRLRSVILHSPLLSGLRVMY
PVKRTYWFDIYKNIDKIPSVNCPVLIIHGTADEVVDFSHGKQLWELCKEKYEPLWIKGGN
HCDLELYPEYIRHLKKFVATIERSQSQRISSRKSTDQQFEPPRKSTDVFEASRKSSDRRE
KPRHSTDRPEKLKNHSSNAITDKLEKLRISFEQMERSRRSVDCTEKSRRSIDHQLERARK
SVDRMERIRTG*

Transcript Sequence

Transcript ID

PGSC0003DMT400017818
Transcript Infomation

pacid=37427041 locus=PGSC0003DMG400006920 ID=PGSC0003DMT400017818.v4.03 annot-version=v4.03
Sequence

ATGGGAGGGGTTACTTCATCAATGGCGGCGAAGTTTGCGTTTTTTCCTCCAAACCCACCT
TCTTATAAGCTTATTAAAGATGATCTCACGGGTCTTTTGCTGCTTAGCCCTTTTCCTCAC
CGTGAAAATGTTGAAGTACTTAAGTTGCCCACTCGTAAAGGTACTGAAATTGTTGCCATG
TATATTAGGCATCCTATGGCTACCTCCACTTTACTGTATTCCCATGGAAATGCGGCTGAC
TTGGGTCAGATGTATGAGCTTTTCATTGAATTGAGCATCCACTTGCGGGTCAATCTCTTG
GGGTATGACTACTCTGGGTATGGACAGTCAACTGGTAAGCCAAGTGAGCAGAATACCTAT
GCAGATATTGAAGCTGCATATAAGTGCCTTGAAGAAAACTATGGCACAAAGCAGGAAGAT
GTTATACTTTATGGCCAATCAGTTGGTAGTGGGCCTACTTTGGATCTTGCAGCTCGTCTA
CCACGATTAAGATCAGTCATTCTGCACAGTCCCCTTCTTTCAGGTTTACGAGTCATGTAT
CCTGTCAAGCGCACGTACTGGTTTGACATTTACAAGAATATTGACAAGATCCCTTCGGTT
AATTGTCCCGTGCTCATCATTCATGGAACTGCAGATGAAGTAGTTGATTTTTCACATGGC
AAGCAACTCTGGGAATTATGCAAGGAGAAGTATGAGCCTTTATGGATCAAGGGAGGGAAC
CATTGCGACTTGGAGCTCTATCCAGAATATATCAGACACCTAAAGAAGTTTGTAGCAACT
ATTGAAAGGTCCCAATCACAAAGGATCAGTTCTAGGAAAAGCACAGACCAGCAGTTTGAG
CCACCAAGAAAGAGTACAGATGTTTTTGAAGCTTCAAGGAAAAGCAGTGACCGTAGAGAA
AAACCGAGACACAGCACAGACAGGCCTGAGAAGTTAAAGAATCATTCCAGTAATGCTATT
ACAGACAAACTAGAAAAACTAAGGATCTCTTTTGAACAAATGGAGAGATCTCGGAGAAGT
GTGGACTGCACTGAAAAATCAAGGAGAAGCATCGATCACCAATTAGAAAGAGCCCGGAAG
AGTGTTGATAGAATGGAGAGAATACGAACTGGTTGA