Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017810
CDS Infomation

pacid=37427386 polypeptide=PGSC0003DMP400012242 locus=PGSC0003DMG400006917 ID=PGSC0003DMT400017810.v4.03 annot-version=v4.03
Sequence

ATGGCCGGAAACTCGGAGGACGAAATCGTCTCCGACGACGTCAAGTTTGGGTTCCAGCGC
CCAGAGATGTATGAACTTAAGCTTGCCGGTACTGCTACCGTCTACGATCGTCACGTATTC
CTCTGCTACAAATCACATGAAGTTTGGCCTTCTCATCTTGAATCCTCCGACTCTGATCCA
CTTCCGAAGCTATTTGCTGCTACTCTTAAAGCTCGCAGGGATGATATCAAACTCAAGACT
ATTTTGACGATTTGCGAAGTACGTGAAGACATTGGACTATCGGATGGAGATGTTCTGATT
TTTCCTGATATGATCAAATACAGGAATTTGAAGGAGTCAGATGTTGATGCTTTTGTTGAG
GATGTGCTTGTGAGTGGCAAGCCATGGACTTCTGGACTGCAGGAGCCAATAAGTGGTTCT
TATGTTTTTGTCTGTTCCCACAATAATCGAGATCGAAGGTGTGGTGTCTGTGGGCCAATT
CTGATTGAGGAATTCAGCAAGGCAATTGAGTCCAAGGACTTGAAAAACGAAGTTCATGTG
GCTGCTTGTTCACATGTTGGTGGCCACAAGTATGCTGGTAATGTGATAATCTACAGTACG
GATAAAGAAGGGAAAATTGCTGGGCATTGGTATGGCTATGTTACCCCAGATGAGGTACCT
ATTTTGCTGGACGAGCATATCGGAGAGGGAAAAATCCTTGAACGACTTTGGAGGGGCCAA
ATGGGACTGCATGCTGAGATAACTAATAAGGTGAATGAGCTGAGTGTTCTCAGTGGAACC
ACTGTGGACAAAAAAGGAAATGCGCCTGTAGAAACTGCTAGTCAGGGCTGTTGTCAAGGT
GCTGCAGGATTTTCTTGTTGTAGAGATGCAAATGCTGAGGGAAAAGAGGTAGAGAAGGGA
CAGGGAAGACTTCCATCCTGTTTCAGAAAATGGGATAAACCTGAAGTTTACACAGCCATT
GGCGTCGTTGGAGCAGTGGCTGTTGTTGCTGTTGCTTATGGATTTTACAAGAAGTCACGC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400012242
PEP Infomation

pacid=37427386 transcript=PGSC0003DMT400017810 locus=PGSC0003DMG400006917 ID=PGSC0003DMT400017810.v4.03 annot-version=v4.03
Sequence

MAGNSEDEIVSDDVKFGFQRPEMYELKLAGTATVYDRHVFLCYKSHEVWPSHLESSDSDP
LPKLFAATLKARRDDIKLKTILTICEVREDIGLSDGDVLIFPDMIKYRNLKESDVDAFVE
DVLVSGKPWTSGLQEPISGSYVFVCSHNNRDRRCGVCGPILIEEFSKAIESKDLKNEVHV
AACSHVGGHKYAGNVIIYSTDKEGKIAGHWYGYVTPDEVPILLDEHIGEGKILERLWRGQ
MGLHAEITNKVNELSVLSGTTVDKKGNAPVETASQGCCQGAAGFSCCRDANAEGKEVEKG
QGRLPSCFRKWDKPEVYTAIGVVGAVAVVAVAYGFYKKSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400017810
Transcript Infomation

pacid=37427386 locus=PGSC0003DMG400006917 ID=PGSC0003DMT400017810.v4.03 annot-version=v4.03
Sequence

ATGGCCGGAAACTCGGAGGACGAAATCGTCTCCGACGACGTCAAGTTTGGGTTCCAGCGC
CCAGAGATGTATGAACTTAAGCTTGCCGGTACTGCTACCGTCTACGATCGTCACGTATTC
CTCTGCTACAAATCACATGAAGTTTGGCCTTCTCATCTTGAATCCTCCGACTCTGATCCA
CTTCCGAAGCTATTTGCTGCTACTCTTAAAGCTCGCAGGGATGATATCAAACTCAAGACT
ATTTTGACGATTTGCGAAGTACGTGAAGACATTGGACTATCGGATGGAGATGTTCTGATT
TTTCCTGATATGATCAAATACAGGAATTTGAAGGAGTCAGATGTTGATGCTTTTGTTGAG
GATGTGCTTGTGAGTGGCAAGCCATGGACTTCTGGACTGCAGGAGCCAATAAGTGGTTCT
TATGTTTTTGTCTGTTCCCACAATAATCGAGATCGAAGGTGTGGTGTCTGTGGGCCAATT
CTGATTGAGGAATTCAGCAAGGCAATTGAGTCCAAGGACTTGAAAAACGAAGTTCATGTG
GCTGCTTGTTCACATGTTGGTGGCCACAAGTATGCTGGTAATGTGATAATCTACAGTACG
GATAAAGAAGGGAAAATTGCTGGGCATTGGTATGGCTATGTTACCCCAGATGAGGTACCT
ATTTTGCTGGACGAGCATATCGGAGAGGGAAAAATCCTTGAACGACTTTGGAGGGGCCAA
ATGGGACTGCATGCTGAGATAACTAATAAGGTGAATGAGCTGAGTGTTCTCAGTGGAACC
ACTGTGGACAAAAAAGGAAATGCGCCTGTAGAAACTGCTAGTCAGGGCTGTTGTCAAGGT
GCTGCAGGATTTTCTTGTTGTAGAGATGCAAATGCTGAGGGAAAAGAGGTAGAGAAGGGA
CAGGGAAGACTTCCATCCTGTTTCAGAAAATGGGATAAACCTGAAGTTTACACAGCCATT
GGCGTCGTTGGAGCAGTGGCTGTTGTTGCTGTTGCTTATGGATTTTACAAGAAGTCACGC
TGA