Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017808
CDS Infomation

pacid=37425997 polypeptide=PGSC0003DMP400012240 locus=PGSC0003DMG400006916 ID=PGSC0003DMT400017808.v4.03 annot-version=v4.03
Sequence

ATGGAGTCACTTGTTGAAGGAATCAGTTCCTTGCCAAACAGTCGCACTCCCTTCACTGCT
ATTAAGGGTAATACATCTTCAGCTTCCAGGACAAGTCGTCCTCCCCATCCTACATCAATG
AGACAATCTAGATGTAAAGAGTTGTCCTTCGATCCAATAGCTATTGATATTGGGTCAAAG
CCAACTGATACCCCAACAGGGTCGGTGGCTGCTTCTAAGAGTTCGCATAAATCATCCAGT
GATCGTATAAAGAGGGATGATGTCTCTGACTCGAGGAGACACTATTCTGAATCGACTAAA
GGAAAAGAGTGTCAGAGAATAGAAGATGCTCTTGATCAACCATCAGAAGAATGTTCACTG
GACCGCGTATTAATCTTTGAAACCAAATCATCTATTAAGGATCCACTTCATGATAACAAG
CACACTACGTCAGGTGGCTATGTGGAACGCAAGGATTTTATGTTACATGCTGTTGCCAGA
GGAGATGCTGACCTTCTAAATGGTCAGTTGACATCTCAATCTGGAATAAGCTATTGTCCT
AGTCCACAGAATAGCTTTTATACTGCCACACAGTACATAGAACCCAAACAAAGTTTCACC
ACTACAGAAGTCATCAGTGAATGTGCTAGCAGCATGGGCAAGTCTGGTGGAAGTGGTGAT
GTTAGCAACTTGTGCGATATCAGTGATAGCAGAAAAACAAGTTTCTACAGAGGCAGCACA
GGTAGTGATATTAGTGATGAAAGCAGCTCTACTAGTGTCGGCAGTACAATGTATAAACCA
CATCAGGCAAATGATACAAGGTGGGATGCAATTCAAGCCATTAGATCTATTGATGGAACA
CTGGGCTTCAACCATTTCAGACTTCTGAAGAGATTGGGAGGTGGTGATATAGGAAATGTT
TTTCTAGCTGAGTTGATTGGCACAAGAGATTATTTTGCCATGAAAGTGATGGACAATGCA
GCTCTAGAGAGTCGCAAGAAAACTGTAAGAGCTCAGACAGAAAGAGAGATACTACAGTCT
CTGGATCATCCTTTTCTACCAACACTATATTCACACTTTGAAACAGACAAATTTTCTTGC
TTGGTGATGGAATTCTGCCCTGGAGGAGATTTACATGCACTTCGGCAAAGACAGCCAGGA
AAGTTTTTTCCCGAGCATGCTGCCAGGTTTTATGTAGCAGAAATTCTCCTTGCTCTAGAA
TACCTGCACATGCTTGGAATCATTTATCGAGATCTTAAGCCAGAGAATGTTTTGGTTCGA
GAAGATGGCCATATAATGCTGTCTGATTTTGACCTCTCCTTGAGGTGTGCTGTGAGTCCA
ACATTGGTTAAATCCTCAAATTCAAGCTTAGAGTCGAAGACTTCATCATACTGTGTCCAG
CCTGCTTGTATTGAGCCATCTTGTGTCATCCAGCCTGCATGTTTTTCACCGCGTTTCCTA
AGGCCCAAGAAAGGAAAGAAGACGAAACAGAAATCTGAGATGCACAATCAAGTGAGCCCG
CTTCCAGAGCTCATGGCTGAACCGACAAATGCTCGATCCATGTCTTTTGTGGGAACACAT
GAGTACCTTGCTCCAGAAATCATTAAAGGCGAGGGGCATGGTAGTGCCGTTGATTGGTGG
ACTTTCGGGATCTTTCTCTATGAGCTCTTGTTTGGGCAGACACCTTTTAAAGGAGCAGGC
AACAGAGCCACCTTGTTTAATGTCGTTGGCCAGCCCCTGAGATTCCCTTCATCACCTAGT
GTTAGTTTTGCTGCAAGGGACTTGATAAGAGGTCTACTTGTGAAAGAGCCTCAGCATCGC
CTAGCATATAGGCGGGGTGCTACAGAAATAAAACAGCATCCTTTCTTTCAGAGCGTTAAT
TGGGCACTTATCCGGTGTGCTAGTCCTCCAGATGTACCAAAGGCGTTTGTGCTACATGAC
GCGCCCAGAGCACCAGCAACAACGGGTCCAGGTGTTGATGTGAAACCTACTGATAATTAT
TTTGAGATTGATTTCTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012240
PEP Infomation

pacid=37425997 transcript=PGSC0003DMT400017808 locus=PGSC0003DMG400006916 ID=PGSC0003DMT400017808.v4.03 annot-version=v4.03
Sequence

MESLVEGISSLPNSRTPFTAIKGNTSSASRTSRPPHPTSMRQSRCKELSFDPIAIDIGSK
PTDTPTGSVAASKSSHKSSSDRIKRDDVSDSRRHYSESTKGKECQRIEDALDQPSEECSL
DRVLIFETKSSIKDPLHDNKHTTSGGYVERKDFMLHAVARGDADLLNGQLTSQSGISYCP
SPQNSFYTATQYIEPKQSFTTTEVISECASSMGKSGGSGDVSNLCDISDSRKTSFYRGST
GSDISDESSSTSVGSTMYKPHQANDTRWDAIQAIRSIDGTLGFNHFRLLKRLGGGDIGNV
FLAELIGTRDYFAMKVMDNAALESRKKTVRAQTEREILQSLDHPFLPTLYSHFETDKFSC
LVMEFCPGGDLHALRQRQPGKFFPEHAARFYVAEILLALEYLHMLGIIYRDLKPENVLVR
EDGHIMLSDFDLSLRCAVSPTLVKSSNSSLESKTSSYCVQPACIEPSCVIQPACFSPRFL
RPKKGKKTKQKSEMHNQVSPLPELMAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWW
TFGIFLYELLFGQTPFKGAGNRATLFNVVGQPLRFPSSPSVSFAARDLIRGLLVKEPQHR
LAYRRGATEIKQHPFFQSVNWALIRCASPPDVPKAFVLHDAPRAPATTGPGVDVKPTDNY
FEIDFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400017808
Transcript Infomation

pacid=37425997 locus=PGSC0003DMG400006916 ID=PGSC0003DMT400017808.v4.03 annot-version=v4.03
Sequence

ATGGAGTCACTTGTTGAAGGAATCAGTTCCTTGCCAAACAGTCGCACTCCCTTCACTGCT
ATTAAGGGTAATACATCTTCAGCTTCCAGGACAAGTCGTCCTCCCCATCCTACATCAATG
AGACAATCTAGATGTAAAGAGTTGTCCTTCGATCCAATAGCTATTGATATTGGGTCAAAG
CCAACTGATACCCCAACAGGGTCGGTGGCTGCTTCTAAGAGTTCGCATAAATCATCCAGT
GATCGTATAAAGAGGGATGATGTCTCTGACTCGAGGAGACACTATTCTGAATCGACTAAA
GGAAAAGAGTGTCAGAGAATAGAAGATGCTCTTGATCAACCATCAGAAGAATGTTCACTG
GACCGCGTATTAATCTTTGAAACCAAATCATCTATTAAGGATCCACTTCATGATAACAAG
CACACTACGTCAGGTGGCTATGTGGAACGCAAGGATTTTATGTTACATGCTGTTGCCAGA
GGAGATGCTGACCTTCTAAATGGTCAGTTGACATCTCAATCTGGAATAAGCTATTGTCCT
AGTCCACAGAATAGCTTTTATACTGCCACACAGTACATAGAACCCAAACAAAGTTTCACC
ACTACAGAAGTCATCAGTGAATGTGCTAGCAGCATGGGCAAGTCTGGTGGAAGTGGTGAT
GTTAGCAACTTGTGCGATATCAGTGATAGCAGAAAAACAAGTTTCTACAGAGGCAGCACA
GGTAGTGATATTAGTGATGAAAGCAGCTCTACTAGTGTCGGCAGTACAATGTATAAACCA
CATCAGGCAAATGATACAAGGTGGGATGCAATTCAAGCCATTAGATCTATTGATGGAACA
CTGGGCTTCAACCATTTCAGACTTCTGAAGAGATTGGGAGGTGGTGATATAGGAAATGTT
TTTCTAGCTGAGTTGATTGGCACAAGAGATTATTTTGCCATGAAAGTGATGGACAATGCA
GCTCTAGAGAGTCGCAAGAAAACTGTAAGAGCTCAGACAGAAAGAGAGATACTACAGTCT
CTGGATCATCCTTTTCTACCAACACTATATTCACACTTTGAAACAGACAAATTTTCTTGC
TTGGTGATGGAATTCTGCCCTGGAGGAGATTTACATGCACTTCGGCAAAGACAGCCAGGA
AAGTTTTTTCCCGAGCATGCTGCCAGGTTTTATGTAGCAGAAATTCTCCTTGCTCTAGAA
TACCTGCACATGCTTGGAATCATTTATCGAGATCTTAAGCCAGAGAATGTTTTGGTTCGA
GAAGATGGCCATATAATGCTGTCTGATTTTGACCTCTCCTTGAGGTGTGCTGTGAGTCCA
ACATTGGTTAAATCCTCAAATTCAAGCTTAGAGTCGAAGACTTCATCATACTGTGTCCAG
CCTGCTTGTATTGAGCCATCTTGTGTCATCCAGCCTGCATGTTTTTCACCGCGTTTCCTA
AGGCCCAAGAAAGGAAAGAAGACGAAACAGAAATCTGAGATGCACAATCAAGTGAGCCCG
CTTCCAGAGCTCATGGCTGAACCGACAAATGCTCGATCCATGTCTTTTGTGGGAACACAT
GAGTACCTTGCTCCAGAAATCATTAAAGGCGAGGGGCATGGTAGTGCCGTTGATTGGTGG
ACTTTCGGGATCTTTCTCTATGAGCTCTTGTTTGGGCAGACACCTTTTAAAGGAGCAGGC
AACAGAGCCACCTTGTTTAATGTCGTTGGCCAGCCCCTGAGATTCCCTTCATCACCTAGT
GTTAGTTTTGCTGCAAGGGACTTGATAAGAGGTCTACTTGTGAAAGAGCCTCAGCATCGC
CTAGCATATAGGCGGGGTGCTACAGAAATAAAACAGCATCCTTTCTTTCAGAGCGTTAAT
TGGGCACTTATCCGGTGTGCTAGTCCTCCAGATGTACCAAAGGCGTTTGTGCTACATGAC
GCGCCCAGAGCACCAGCAACAACGGGTCCAGGTGTTGATGTGAAACCTACTGATAATTAT
TTTGAGATTGATTTCTTCTGA