Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017799
CDS Infomation

pacid=37428821 polypeptide=PGSC0003DMP400012231 locus=PGSC0003DMG400006911 ID=PGSC0003DMT400017799.v4.03 annot-version=v4.03
Sequence

ATGGGTGTTCAAGGTCTCTGGGATCTCATCGCCCCCGTTGGCCGCCGCGTCTCCGTCGAG
ACCCTCGCCGGGAAAAAACTGGCAATCGATGCGAGTATATGGATTATACAATTCATGAAA
GCAATGCGAGATGAAAAGGGAGAGATGGTGCGGAATGCTCATATTTTGGGATTTTTCCGT
CGAATTTGCAAGCTACTCTACCTTCGGACCAAGCCAGTATTTGTATTTGACGGTGGCACA
CCTGCTCTGAAGCGTCGAACAGTGATCGCCCGTCGCCGCCAGAGGGAAAATGCTCAGGCC
AAAATTAGGAAGACGGCTGAAAAGTTGCTCCTTAATCATCTTAAGGCAATGAGGCTCAAA
GAGCTGTCTGTGGATCTGGAGAACCAGAGGAAACTGAATGATGCAAAGGGTAAAAAGGTT
ATAACAGAAGCAACTGGAACTATGGAGAACATGGCTGAAGGAAATGGCTTGGGGGCAGAA
AATTATGACAAAGAAGCATTGGATGAGATGTTGGCAGCTTCTATTCAAGCAGAGGAAGAC
TGGAATTTTGCTGATGATGCATCAACATCTTGTGCTGCGGCTCCTGCTGAAAATGATAAC
ACTGATGAAGATGAAGAGATGATACTGCCAGCAACACAAGGAAAAGTTGATCCTTCTGTT
TTAGCTGCTTTACCTCCATCTATGCAACTTGATCTTCTTGGTCAGATGAGGGAGAGATTG
ATGGCAGAGAACAGACAAAAGTATCAGAAGGTCAAGAAGGCCCCGGAAAAGTTCTCAGAA
CTGCAAATACAATCTTATCTGAAAACTGTTGCTTTTCGGCGCGAGATAGGTGAAGTACAG
AAAGCTGCTGCTGGAAGGGGAATAGGTGGTGTGCGTACTTCAAGGATTGCTTCTGAAGCA
AATAGGGAATTTATTTTCTCCTCATCTTTTACTGGGGACAAAGATGTCCTTGCATCTGCT
GGGGAAGATCAAATTAGTAAGAAGTCAAGTGAAGTACAAACAGAAAATAATTTGGCAAAT
GCTGCGGGTGATGCTTCGACAAGGAAATCTAGTAGTGTGCTAGAATCGATTGTGTCTGAG
CCTGAAAGCGCATTTAATGATGATGTGGAGACATATCTGGATGAGAGGGGTCATCTTCGA
GTCAGCAGACTGAGAGCCATGGGTGTACGCATGACTCGAGATTTACAGAGAAATTTAGAT
TTGATGAAAGAAATTGAGGAGGAGAGTGTGTCCAGAAATAAAGATTTTAGCGATGTGCCT
ACTGTAAGTGACACTGATGTACATACCCCTGGAAATGTCTCTGATACAATTTTGCATCTG
AACTCATCCAATCCAGATGATGATGGGAAGGATTGTTTAAACAACAAAACTGAAGAGTCT
GAGTTGAGAAGTGGGACTACAATTCAGATATCTTTTGAAGATAATTTTGAACATGATTGT
GCCAATGATGATGATGATATATTTGCGAGTTTAGTGGCAGGTGATCCAGGGATGGAATTT
CCTATGGATCATTCCCCCTCAAAGAAACAGTCTCTAGATTCTGCTTCGGACGTTGAGTGG
GAGGAAGGAGTGATTGAAGAGAAAGGTGACTTGCTAAGCAGTAACTCTCAAGGGGAAGGT
CAGGCTCCACTGGAGATAGATGGCATGGATGATGAGGCTGAAGTAGAATGGGAAGAAGGA
TGTTTAGACATTTGCGAGGAGCCTCCCTTACTTCCACTGGATTCAAGAAGTGCTTATAAA
GGTGCTTTGGAAGAAGAAGCCAATTATCAGGAAGCAGTAAAGAGGAGTCTCGAGGATATG
AGAGATCATAGATACATTGATAAATCTCATGAAAAAGAGATGTCTGAAGAAGCTATTCAA
ATAACTGCTCAGGGTATAAGTATTGAATCTGTTGGTCAAGAGAACTACTGCCCAAAGGTA
CACAAAATTCTTCAACAGAAAGATTTACCATCTGAAATTCAGACTGCTGACTTGCATGAT
ACTGTTCATGAGATGGATATTGCAGGGAGTAATAACAGTTTGGGGACCCATTTGGGAGAA
CAATTTCAAGCTAATTCTGGTTATGGAAATATGCAGATTGAAAAGGCAACCAGTCATCCT
GATAGAAATTTGCAGATTGAAAAAGCAACCAGTCATACTAACAGAAATTTGCATTGTGAC
ATACATATGGAACCGACCATTCCACTTGATGGATCAGAGGTTGACATGATTAAAAAGACG
ATAGCAGATACCACTGTTGGGGTTTCGAGTAACAATAACACAAATAGTGCTTCAGATGTT
ACTTATATAGAACAATCAACATTTAATGAATCAATGAATGCAAGAACCACTGATGCCCAA
CAATATGAATCTGGAGCAGCCGCACATCATTATACACAAGAGACGACAGAACTCACCAAA
GCTTTCACCGAGGGTTTTACAACTGATATCAATAGTGCACAAAACCTAGATGAGGAAGGT
GCTTGTGATGACCCATTATTTGAGAGAATTGACAATTTGGACTCTGCAAGTACAAAAGAA
GATCAAAAAGTTATGATGGCTAGTTTGGAGGAGGAGATGCATGTATTGGATGAACAGCGT
GAAAAACTAGGAGATGAGCAGAGAAAGCTTGAGCGTAATGCAGATTCTGTTAGCTCTGAA
ATGTTTGCAGAGTGCCAGGAGTTGCTCCAAATGTTTGGCTTGCCATATATCATAGCTCCA
ATGGAAGCTGAAGCCCAATGTGCGTACATGGAACTTACAAATCTTGTCGATGGTGTGGTT
ACTGACGACTCTGATGCATTCTTGTTTGGTGCTCGAAGTGTATACAAGAATATTTTTGAC
GATCGCAAATATGTGGAGACTTACTTTATGAAGGATGTGGAGAATGAGCTTGGGTTGGAT
AGAGAAAAAATAATTCGTATGGCATTGCTCCTTGGGAGCGATTATACTGAAGGAGTGAGT
GGGGTCGGTATTGTTAATGCTATTGAAGTTGTAAATGCATTTCCTGAGGAAGACGGTCTT
CAGAAATTTCGTGAGTGGGTGGAATCGCCAGATCCATCCATTCTCGGGGGGCTTGATGCA
CAGACAGGTTCCAGCTCTAGGAAGAGAGGGTGTAAAGGTGGTGATCCTGATATGAGTTGC
TCAACCAGCAATCTGGAAGGCAATGCTGCTTCCGAGGACAGAGCTGAAAAGTTGAGGCAG
ATTTTCATGAATAAACATAGAAATATTAGTAAAAACTGGCATATTCCTTCTTCGTTTCCA
AGTAATGCTGTAATTTCAGCATATACGTCTCCACGAGTTGACAAGTCAACAGAGCCTTTT
GCATGGGGGAAGCCTGATGTTTCTGTTCTTCGCAAAGTTTGTTGGGAGAAATTCGGCTGG
AGCAGCCAGAAGGCAGATGAATTGCTAGTACCGGTACTGAAAGAGTACAACAAACATGAG
ACACAACTTCGACTGGAAGCCTTTTACTCTTTCAATGAGAGATTTGCGAAAATCCGTAGC
AAGAGGATAAATAAGGCTGTTAAATATATGACTGTGAACAAATCCAGTGATTTAATGGAT
GGAAGTGCACAAGATGCTCCTGGAAGCTGTAAAAAAAGAGTAGTAAAATCTAATGATATG
AATGAGGAAAAGATGGAAGATCCTCCGAGGGGACTAGAGTCTGCTGGTGCTGATTATGAG
GAGACTACAACAAAAAGAAGATCAGTTGGGAAGCAGTCAAGGAAAAGGAAAGGAGGGCTT
CTGCAGACTGAACATTTGGAACCACCAGAGGGAGCAGGAAGCAAGCGAAACACCAGTAAG
AAATCAAGTGGTAGTATAGGAGGACGGAAAGAAACAGCTCGATCTGTGCGGAAGGCAAGT
AAAAAATCCTCCTCCAGATCCTCCAAAACAAGCTCTGAGGGTGAAAAAGATAGTGATATA
GAGCAACAATCACAAATCGAGAAGCTTGAAAAGCCAAATCAAGCAAGAAGGTCACAGCGT
CATCGGAAAATAGTAATTTACAGTGAGAAGAGAGATGATGAGTTTGACAAAGATGATGGA
GATTCTACTACTGAAAAGTTAGAAAGGAGAGAATCAGGAGCAGATGTGGACATAGCTGAA
CGTTATCCTGCTGATTCTAGTAAGATGAATGAGAATGATGCAAGTAATGATTACTGCCCA
CAAGAACTGCCAAACCTTGAAACAAATGCTGGTGTTGATGCAGGTGGGGCAGAGATGGAA
TCTACTGTTCAACCAAGCTTTGATGAAACTTCTGATCCTATTCCAGGGGATCTTTTGTCT
AAGGAGTACCTTAAAATGGGGGGTGGGTTTTGTTTAGAGGAAAATGATGGAGATATGGAG
CATGAGATAAATGCTTCTAGCCCTATCTTATCAGTTGAGTGTTCTGATATTTATAATTCT
TCTCAGCTTTTCGGAGATGGGAATAGTGGTAATGCTTCAAATCAATTGGTTTCTAGCCCC
TCAAGGAAAACGAGTGAGAAGCAATGTGAAGCAGGGATAGGTGCATCTGAAATTGAGCAA
GATTTAAACAACACAACTAATATTACTTGTAACGATGTATCCCCACACCTAGAAAATATG
GGGAACAATGATTATGTTTCCACTTCGGTATTTCTACGTGCAATGCCAAATTTGAGGAAG
CGGAAGAAGAATAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012231
PEP Infomation

pacid=37428821 transcript=PGSC0003DMT400017799 locus=PGSC0003DMG400006911 ID=PGSC0003DMT400017799.v4.03 annot-version=v4.03
Sequence

MGVQGLWDLIAPVGRRVSVETLAGKKLAIDASIWIIQFMKAMRDEKGEMVRNAHILGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK
ELSVDLENQRKLNDAKGKKVITEATGTMENMAEGNGLGAENYDKEALDEMLAASIQAEED
WNFADDASTSCAAAPAENDNTDEDEEMILPATQGKVDPSVLAALPPSMQLDLLGQMRERL
MAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIGEVQKAAAGRGIGGVRTSRIASEA
NREFIFSSSFTGDKDVLASAGEDQISKKSSEVQTENNLANAAGDASTRKSSSVLESIVSE
PESAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDLMKEIEEESVSRNKDFSDVP
TVSDTDVHTPGNVSDTILHLNSSNPDDDGKDCLNNKTEESELRSGTTIQISFEDNFEHDC
ANDDDDIFASLVAGDPGMEFPMDHSPSKKQSLDSASDVEWEEGVIEEKGDLLSSNSQGEG
QAPLEIDGMDDEAEVEWEEGCLDICEEPPLLPLDSRSAYKGALEEEANYQEAVKRSLEDM
RDHRYIDKSHEKEMSEEAIQITAQGISIESVGQENYCPKVHKILQQKDLPSEIQTADLHD
TVHEMDIAGSNNSLGTHLGEQFQANSGYGNMQIEKATSHPDRNLQIEKATSHTNRNLHCD
IHMEPTIPLDGSEVDMIKKTIADTTVGVSSNNNTNSASDVTYIEQSTFNESMNARTTDAQ
QYESGAAAHHYTQETTELTKAFTEGFTTDINSAQNLDEEGACDDPLFERIDNLDSASTKE
DQKVMMASLEEEMHVLDEQREKLGDEQRKLERNADSVSSEMFAECQELLQMFGLPYIIAP
MEAEAQCAYMELTNLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDVENELGLD
REKIIRMALLLGSDYTEGVSGVGIVNAIEVVNAFPEEDGLQKFREWVESPDPSILGGLDA
QTGSSSRKRGCKGGDPDMSCSTSNLEGNAASEDRAEKLRQIFMNKHRNISKNWHIPSSFP
SNAVISAYTSPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQKADELLVPVLKEYNKHE
TQLRLEAFYSFNERFAKIRSKRINKAVKYMTVNKSSDLMDGSAQDAPGSCKKRVVKSNDM
NEEKMEDPPRGLESAGADYEETTTKRRSVGKQSRKRKGGLLQTEHLEPPEGAGSKRNTSK
KSSGSIGGRKETARSVRKASKKSSSRSSKTSSEGEKDSDIEQQSQIEKLEKPNQARRSQR
HRKIVIYSEKRDDEFDKDDGDSTTEKLERRESGADVDIAERYPADSSKMNENDASNDYCP
QELPNLETNAGVDAGGAEMESTVQPSFDETSDPIPGDLLSKEYLKMGGGFCLEENDGDME
HEINASSPILSVECSDIYNSSQLFGDGNSGNASNQLVSSPSRKTSEKQCEAGIGASEIEQ
DLNNTTNITCNDVSPHLENMGNNDYVSTSVFLRAMPNLRKRKKNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400017799
Transcript Infomation

pacid=37428821 locus=PGSC0003DMG400006911 ID=PGSC0003DMT400017799.v4.03 annot-version=v4.03
Sequence

ATGGGTGTTCAAGGTCTCTGGGATCTCATCGCCCCCGTTGGCCGCCGCGTCTCCGTCGAG
ACCCTCGCCGGGAAAAAACTGGCAATCGATGCGAGTATATGGATTATACAATTCATGAAA
GCAATGCGAGATGAAAAGGGAGAGATGGTGCGGAATGCTCATATTTTGGGATTTTTCCGT
CGAATTTGCAAGCTACTCTACCTTCGGACCAAGCCAGTATTTGTATTTGACGGTGGCACA
CCTGCTCTGAAGCGTCGAACAGTGATCGCCCGTCGCCGCCAGAGGGAAAATGCTCAGGCC
AAAATTAGGAAGACGGCTGAAAAGTTGCTCCTTAATCATCTTAAGGCAATGAGGCTCAAA
GAGCTGTCTGTGGATCTGGAGAACCAGAGGAAACTGAATGATGCAAAGGGTAAAAAGGTT
ATAACAGAAGCAACTGGAACTATGGAGAACATGGCTGAAGGAAATGGCTTGGGGGCAGAA
AATTATGACAAAGAAGCATTGGATGAGATGTTGGCAGCTTCTATTCAAGCAGAGGAAGAC
TGGAATTTTGCTGATGATGCATCAACATCTTGTGCTGCGGCTCCTGCTGAAAATGATAAC
ACTGATGAAGATGAAGAGATGATACTGCCAGCAACACAAGGAAAAGTTGATCCTTCTGTT
TTAGCTGCTTTACCTCCATCTATGCAACTTGATCTTCTTGGTCAGATGAGGGAGAGATTG
ATGGCAGAGAACAGACAAAAGTATCAGAAGGTCAAGAAGGCCCCGGAAAAGTTCTCAGAA
CTGCAAATACAATCTTATCTGAAAACTGTTGCTTTTCGGCGCGAGATAGGTGAAGTACAG
AAAGCTGCTGCTGGAAGGGGAATAGGTGGTGTGCGTACTTCAAGGATTGCTTCTGAAGCA
AATAGGGAATTTATTTTCTCCTCATCTTTTACTGGGGACAAAGATGTCCTTGCATCTGCT
GGGGAAGATCAAATTAGTAAGAAGTCAAGTGAAGTACAAACAGAAAATAATTTGGCAAAT
GCTGCGGGTGATGCTTCGACAAGGAAATCTAGTAGTGTGCTAGAATCGATTGTGTCTGAG
CCTGAAAGCGCATTTAATGATGATGTGGAGACATATCTGGATGAGAGGGGTCATCTTCGA
GTCAGCAGACTGAGAGCCATGGGTGTACGCATGACTCGAGATTTACAGAGAAATTTAGAT
TTGATGAAAGAAATTGAGGAGGAGAGTGTGTCCAGAAATAAAGATTTTAGCGATGTGCCT
ACTGTAAGTGACACTGATGTACATACCCCTGGAAATGTCTCTGATACAATTTTGCATCTG
AACTCATCCAATCCAGATGATGATGGGAAGGATTGTTTAAACAACAAAACTGAAGAGTCT
GAGTTGAGAAGTGGGACTACAATTCAGATATCTTTTGAAGATAATTTTGAACATGATTGT
GCCAATGATGATGATGATATATTTGCGAGTTTAGTGGCAGGTGATCCAGGGATGGAATTT
CCTATGGATCATTCCCCCTCAAAGAAACAGTCTCTAGATTCTGCTTCGGACGTTGAGTGG
GAGGAAGGAGTGATTGAAGAGAAAGGTGACTTGCTAAGCAGTAACTCTCAAGGGGAAGGT
CAGGCTCCACTGGAGATAGATGGCATGGATGATGAGGCTGAAGTAGAATGGGAAGAAGGA
TGTTTAGACATTTGCGAGGAGCCTCCCTTACTTCCACTGGATTCAAGAAGTGCTTATAAA
GGTGCTTTGGAAGAAGAAGCCAATTATCAGGAAGCAGTAAAGAGGAGTCTCGAGGATATG
AGAGATCATAGATACATTGATAAATCTCATGAAAAAGAGATGTCTGAAGAAGCTATTCAA
ATAACTGCTCAGGGTATAAGTATTGAATCTGTTGGTCAAGAGAACTACTGCCCAAAGGTA
CACAAAATTCTTCAACAGAAAGATTTACCATCTGAAATTCAGACTGCTGACTTGCATGAT
ACTGTTCATGAGATGGATATTGCAGGGAGTAATAACAGTTTGGGGACCCATTTGGGAGAA
CAATTTCAAGCTAATTCTGGTTATGGAAATATGCAGATTGAAAAGGCAACCAGTCATCCT
GATAGAAATTTGCAGATTGAAAAAGCAACCAGTCATACTAACAGAAATTTGCATTGTGAC
ATACATATGGAACCGACCATTCCACTTGATGGATCAGAGGTTGACATGATTAAAAAGACG
ATAGCAGATACCACTGTTGGGGTTTCGAGTAACAATAACACAAATAGTGCTTCAGATGTT
ACTTATATAGAACAATCAACATTTAATGAATCAATGAATGCAAGAACCACTGATGCCCAA
CAATATGAATCTGGAGCAGCCGCACATCATTATACACAAGAGACGACAGAACTCACCAAA
GCTTTCACCGAGGGTTTTACAACTGATATCAATAGTGCACAAAACCTAGATGAGGAAGGT
GCTTGTGATGACCCATTATTTGAGAGAATTGACAATTTGGACTCTGCAAGTACAAAAGAA
GATCAAAAAGTTATGATGGCTAGTTTGGAGGAGGAGATGCATGTATTGGATGAACAGCGT
GAAAAACTAGGAGATGAGCAGAGAAAGCTTGAGCGTAATGCAGATTCTGTTAGCTCTGAA
ATGTTTGCAGAGTGCCAGGAGTTGCTCCAAATGTTTGGCTTGCCATATATCATAGCTCCA
ATGGAAGCTGAAGCCCAATGTGCGTACATGGAACTTACAAATCTTGTCGATGGTGTGGTT
ACTGACGACTCTGATGCATTCTTGTTTGGTGCTCGAAGTGTATACAAGAATATTTTTGAC
GATCGCAAATATGTGGAGACTTACTTTATGAAGGATGTGGAGAATGAGCTTGGGTTGGAT
AGAGAAAAAATAATTCGTATGGCATTGCTCCTTGGGAGCGATTATACTGAAGGAGTGAGT
GGGGTCGGTATTGTTAATGCTATTGAAGTTGTAAATGCATTTCCTGAGGAAGACGGTCTT
CAGAAATTTCGTGAGTGGGTGGAATCGCCAGATCCATCCATTCTCGGGGGGCTTGATGCA
CAGACAGGTTCCAGCTCTAGGAAGAGAGGGTGTAAAGGTGGTGATCCTGATATGAGTTGC
TCAACCAGCAATCTGGAAGGCAATGCTGCTTCCGAGGACAGAGCTGAAAAGTTGAGGCAG
ATTTTCATGAATAAACATAGAAATATTAGTAAAAACTGGCATATTCCTTCTTCGTTTCCA
AGTAATGCTGTAATTTCAGCATATACGTCTCCACGAGTTGACAAGTCAACAGAGCCTTTT
GCATGGGGGAAGCCTGATGTTTCTGTTCTTCGCAAAGTTTGTTGGGAGAAATTCGGCTGG
AGCAGCCAGAAGGCAGATGAATTGCTAGTACCGGTACTGAAAGAGTACAACAAACATGAG
ACACAACTTCGACTGGAAGCCTTTTACTCTTTCAATGAGAGATTTGCGAAAATCCGTAGC
AAGAGGATAAATAAGGCTGTTAAATATATGACTGTGAACAAATCCAGTGATTTAATGGAT
GGAAGTGCACAAGATGCTCCTGGAAGCTGTAAAAAAAGAGTAGTAAAATCTAATGATATG
AATGAGGAAAAGATGGAAGATCCTCCGAGGGGACTAGAGTCTGCTGGTGCTGATTATGAG
GAGACTACAACAAAAAGAAGATCAGTTGGGAAGCAGTCAAGGAAAAGGAAAGGAGGGCTT
CTGCAGACTGAACATTTGGAACCACCAGAGGGAGCAGGAAGCAAGCGAAACACCAGTAAG
AAATCAAGTGGTAGTATAGGAGGACGGAAAGAAACAGCTCGATCTGTGCGGAAGGCAAGT
AAAAAATCCTCCTCCAGATCCTCCAAAACAAGCTCTGAGGGTGAAAAAGATAGTGATATA
GAGCAACAATCACAAATCGAGAAGCTTGAAAAGCCAAATCAAGCAAGAAGGTCACAGCGT
CATCGGAAAATAGTAATTTACAGTGAGAAGAGAGATGATGAGTTTGACAAAGATGATGGA
GATTCTACTACTGAAAAGTTAGAAAGGAGAGAATCAGGAGCAGATGTGGACATAGCTGAA
CGTTATCCTGCTGATTCTAGTAAGATGAATGAGAATGATGCAAGTAATGATTACTGCCCA
CAAGAACTGCCAAACCTTGAAACAAATGCTGGTGTTGATGCAGGTGGGGCAGAGATGGAA
TCTACTGTTCAACCAAGCTTTGATGAAACTTCTGATCCTATTCCAGGGGATCTTTTGTCT
AAGGAGTACCTTAAAATGGGGGGTGGGTTTTGTTTAGAGGAAAATGATGGAGATATGGAG
CATGAGATAAATGCTTCTAGCCCTATCTTATCAGTTGAGTGTTCTGATATTTATAATTCT
TCTCAGCTTTTCGGAGATGGGAATAGTGGTAATGCTTCAAATCAATTGGTTTCTAGCCCC
TCAAGGAAAACGAGTGAGAAGCAATGTGAAGCAGGGATAGGTGCATCTGAAATTGAGCAA
GATTTAAACAACACAACTAATATTACTTGTAACGATGTATCCCCACACCTAGAAAATATG
GGGAACAATGATTATGTTTCCACTTCGGTATTTCTACGTGCAATGCCAAATTTGAGGAAG
CGGAAGAAGAATAGCTGA