Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017765
CDS Infomation

pacid=37426181 polypeptide=PGSC0003DMP400012212 locus=PGSC0003DMG400006900 ID=PGSC0003DMT400017765.v4.03 annot-version=v4.03
Sequence

ATGGCGGTTCAATCATCACACACTGCATTTTCTTTTCTCTCACCTCTTCGGTCTCACTCA
ATCGTCCCGGAGACCAGTTTGCTTAGCTTCAAGCCTTCTCTCGTCGGATATCCTTTCACA
GCAACCAATCGTCGCCGACCGTTCATTATCACAGTCTCTTCCAAATCCAACAATGAACTC
TCAGTTGATAAGAAAAGGCAGTTACTTGAACAATACGGGCTAAATCCGGATGAGTTCTTA
TCTGAACCATCTCCAAAGACAAAGAAGAGAAGAGAACAATCCAAGAGCGGAACCGGAAAA
CAGGTCCTAGTAGAAGAACCTAAGCCTCCACGGGAGACACATAAATTGCTTCAGGTTGTT
GGGGGGACGGCTCGAAGGAAGAAATTGCTCTCACCAAAGAGCATGGATGTGCGTCCCATG
ATGGAAGTTGTAAAAGCTGCTGCATTTGGTATTTTGCAAGCAGCCGGTGGTTGCCCTGCA
TCTTTGAGGCCTGGCCGTTGGTTGGACCTATATAGTGGGACAGGATCAGTTGGTATAGAA
GCCATCAGCCGAGGGTGTTCTGAGGTGCATTTTGTTGAGATGGACCCTTGGGTTGTCTCA
GATGTTCTCCGGCCTAATTTAGAATGGACTGGTTTCCTTGATGCGTCTGTCATACATACT
GTCCGTGTTGAAAGCTTCTTGGAGCGTGCAGAACATTTTCTTGGTGAAGATGGGAGCTTT
GATTATATTAGTGTTACACCACCATATGCTGTTGTTGATTACAGTATATTAATGGATCAA
ATTTCAAAATCATCAATAGTGGGAGAGAATACATTTATACTGGTGGAGTACCCTTTCAGA
ACTGACATGCTGGATTCGTGCGGTTGCCTTGTTAAGATATCTGATCGGCGGTTTGGTCGA
ACGCATTTGGCAATATATGGACCAAAGTGGGCACTGAAGAAGAAATATGTAGAGAAGACA
AAGAGAAAGCAGGAAAAGCTGGATTTGCTTAGGGAAGTGGAGATTTCGGCATCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012212
PEP Infomation

pacid=37426181 transcript=PGSC0003DMT400017765 locus=PGSC0003DMG400006900 ID=PGSC0003DMT400017765.v4.03 annot-version=v4.03
Sequence

MAVQSSHTAFSFLSPLRSHSIVPETSLLSFKPSLVGYPFTATNRRRPFIITVSSKSNNEL
SVDKKRQLLEQYGLNPDEFLSEPSPKTKKRREQSKSGTGKQVLVEEPKPPRETHKLLQVV
GGTARRKKLLSPKSMDVRPMMEVVKAAAFGILQAAGGCPASLRPGRWLDLYSGTGSVGIE
AISRGCSEVHFVEMDPWVVSDVLRPNLEWTGFLDASVIHTVRVESFLERAEHFLGEDGSF
DYISVTPPYAVVDYSILMDQISKSSIVGENTFILVEYPFRTDMLDSCGCLVKISDRRFGR
THLAIYGPKWALKKKYVEKTKRKQEKLDLLREVEISAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400017765
Transcript Infomation

pacid=37426181 locus=PGSC0003DMG400006900 ID=PGSC0003DMT400017765.v4.03 annot-version=v4.03
Sequence

ATGGCGGTTCAATCATCACACACTGCATTTTCTTTTCTCTCACCTCTTCGGTCTCACTCA
ATCGTCCCGGAGACCAGTTTGCTTAGCTTCAAGCCTTCTCTCGTCGGATATCCTTTCACA
GCAACCAATCGTCGCCGACCGTTCATTATCACAGTCTCTTCCAAATCCAACAATGAACTC
TCAGTTGATAAGAAAAGGCAGTTACTTGAACAATACGGGCTAAATCCGGATGAGTTCTTA
TCTGAACCATCTCCAAAGACAAAGAAGAGAAGAGAACAATCCAAGAGCGGAACCGGAAAA
CAGGTCCTAGTAGAAGAACCTAAGCCTCCACGGGAGACACATAAATTGCTTCAGGTTGTT
GGGGGGACGGCTCGAAGGAAGAAATTGCTCTCACCAAAGAGCATGGATGTGCGTCCCATG
ATGGAAGTTGTAAAAGCTGCTGCATTTGGTATTTTGCAAGCAGCCGGTGGTTGCCCTGCA
TCTTTGAGGCCTGGCCGTTGGTTGGACCTATATAGTGGGACAGGATCAGTTGGTATAGAA
GCCATCAGCCGAGGGTGTTCTGAGGTGCATTTTGTTGAGATGGACCCTTGGGTTGTCTCA
GATGTTCTCCGGCCTAATTTAGAATGGACTGGTTTCCTTGATGCGTCTGTCATACATACT
GTCCGTGTTGAAAGCTTCTTGGAGCGTGCAGAACATTTTCTTGGTGAAGATGGGAGCTTT
GATTATATTAGTGTTACACCACCATATGCTGTTGTTGATTACAGTATATTAATGGATCAA
ATTTCAAAATCATCAATAGTGGGAGAGAATACATTTATACTGGTGGAGTACCCTTTCAGA
ACTGACATGCTGGATTCGTGCGGTTGCCTTGTTAAGATATCTGATCGGCGGTTTGGTCGA
ACGCATTTGGCAATATATGGACCAAAGTGGGCACTGAAGAAGAAATATGTAGAGAAGACA
AAGAGAAAGCAGGAAAAGCTGGATTTGCTTAGGGAAGTGGAGATTTCGGCATCGTAA