Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017725
CDS Infomation

pacid=37441533 polypeptide=PGSC0003DMP400012181 locus=PGSC0003DMG400006876 ID=PGSC0003DMT400017725.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGTCCATGGCATTGCTTATGATTATGGCTTTATCCTATTTTACAGCTATAGCA
AATTCACAGGTGAAGAACATCTTCTTACTAGCTGGACAAAGCAACATGTCGGGCCTAGGA
GGTGTCGTGAACAACACATGGGATGGTATTGTTCCATTGGAGTGTAGCCCGAATCCGGCC
ATCCTCAAACTTGATGCCAAACTTCAATGGGTGGAGGCAACTGAACCTTTACATGCAGAT
ATCGACACAAATGTTACTTGTGGGATTGGTCCAGGTATGCCCTTCGCAAATTCTTTGTTG
AATAAAACTTCGTTTCTTGGGGAAGTAGGGTTGGTACCATGCGCAATGGCGGGGAACAGA
ATAAGTCAATGGCAAAAGGGAACTTTCCTTTACAATCAGCTGGTGATGAGAGCCAAAGCT
GCTGCAGTGCAAGAATGTGGGGTAACTAGAGCTATGCTTTGGTATCAAGGGGAGAGTGAC
ACAACGTTACTGAGTAATGCAAATGCTTATAAAGGAAAAATGCAACAATTTTTCACAGAC
TTGAGAAGTGATGTTGGGATACCAGATCTTTTGATTATCCAGGTGGCTCTAGCTTCAGGA
ACAAATTACACAGATATAGTAAGAGAAGCACAGTTAAATCCTGACCTTGCAAATGTAGTA
ACTGTTGATGCCAGGGGTTTGGAGTTGCATAAAGACAATTTACACCTTACTGCTTCTTCC
CAAGTCTTCCTAGGACACATGATGGCTGATGCTTATCTTCAGACAATCTCAACCACATCC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400012181
PEP Infomation

pacid=37441533 transcript=PGSC0003DMT400017725 locus=PGSC0003DMG400006876 ID=PGSC0003DMT400017725.v4.03 annot-version=v4.03
Sequence

MAKSMALLMIMALSYFTAIANSQVKNIFLLAGQSNMSGLGGVVNNTWDGIVPLECSPNPA
ILKLDAKLQWVEATEPLHADIDTNVTCGIGPGMPFANSLLNKTSFLGEVGLVPCAMAGNR
ISQWQKGTFLYNQLVMRAKAAAVQECGVTRAMLWYQGESDTTLLSNANAYKGKMQQFFTD
LRSDVGIPDLLIIQVALASGTNYTDIVREAQLNPDLANVVTVDARGLELHKDNLHLTASS
QVFLGHMMADAYLQTISTTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400017725
Transcript Infomation

pacid=37441533 locus=PGSC0003DMG400006876 ID=PGSC0003DMT400017725.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGTCCATGGCATTGCTTATGATTATGGCTTTATCCTATTTTACAGCTATAGCA
AATTCACAGGTGAAGAACATCTTCTTACTAGCTGGACAAAGCAACATGTCGGGCCTAGGA
GGTGTCGTGAACAACACATGGGATGGTATTGTTCCATTGGAGTGTAGCCCGAATCCGGCC
ATCCTCAAACTTGATGCCAAACTTCAATGGGTGGAGGCAACTGAACCTTTACATGCAGAT
ATCGACACAAATGTTACTTGTGGGATTGGTCCAGGTATGCCCTTCGCAAATTCTTTGTTG
AATAAAACTTCGTTTCTTGGGGAAGTAGGGTTGGTACCATGCGCAATGGCGGGGAACAGA
ATAAGTCAATGGCAAAAGGGAACTTTCCTTTACAATCAGCTGGTGATGAGAGCCAAAGCT
GCTGCAGTGCAAGAATGTGGGGTAACTAGAGCTATGCTTTGGTATCAAGGGGAGAGTGAC
ACAACGTTACTGAGTAATGCAAATGCTTATAAAGGAAAAATGCAACAATTTTTCACAGAC
TTGAGAAGTGATGTTGGGATACCAGATCTTTTGATTATCCAGGTGGCTCTAGCTTCAGGA
ACAAATTACACAGATATAGTAAGAGAAGCACAGTTAAATCCTGACCTTGCAAATGTAGTA
ACTGTTGATGCCAGGGGTTTGGAGTTGCATAAAGACAATTTACACCTTACTGCTTCTTCC
CAAGTCTTCCTAGGACACATGATGGCTGATGCTTATCTTCAGACAATCTCAACCACATCC
TAA