Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017716
CDS Infomation

pacid=37435770 polypeptide=PGSC0003DMP400012176 locus=PGSC0003DMG400006871 ID=PGSC0003DMT400017716.v4.03 annot-version=v4.03
Sequence

ATGGAGATAGCTGTCATTGATTGGAAAACCATTGATTCAAGATTTGTTAAAGACGATCTT
TATGAGCATTTTAAAGCTCCTCAATGGGTTGATTTTTTCGCCCCCGATGCTCCTGTTGAT
GATGATGCTTGGTTCTGCAGACCTGAGTGTAATCATCCAAAGACTCTGGAAGATTTCTAT
AAAGTAGCTACCCCTTCCTCCTCTTCGAAGCTTCAAAGATCAGCTAGTGTATCTGATATT
CCTCTTGGGGAACGAAATAGGAGAGATGCAACATTGAAGAAGAGAGGGCTAATTCAACCG
CTGATATCATTGAATAAAGACTTGAAATGTGATAAGATTGTTGAAGATAGTGAAAATCAG
AATCCCAATTTTGCAACCCCTCCAAGGTTCTTCAAGGCTAAATTGATGAAACAAACAATC
AAGTCGAGCGCGGAGAAGAAGCCAGTTGATGAAAAAGAGGAACATATACCAAAGCTGAAA
AGTACTCTTTCAGCTAGGAATCTTTTTGCTGGTGGGGATTTGTTGAACAAGGTGTCTGAG
TTTTGCAATGAGCTGAAGAGACTGGTAGTTACCAGGACTAAAGAGAGAGAGAAATGTGCA
GATGAGAACTTGCCACTAATTGTTGATGATAAAGAAAGGGAAAGGAAGCCATTGCTGGAG
ATGACTAAAGAAACTAATGAACTAGTGGCAAAGAGCAACACTAAGGAGAAACAGAGAAGG
AAACTGAGAAATGATAATGCAGAAAACACACCAATACTTGTGGATGTGAAGAACATTAAG
CGCAGAGATGAAGAGATCTTGTCTCAAATCCGCACAAATCCTCCCACTCCTCAGTGTTTC
TCAGCCAGCCGGGGAGTTACAAAGGCCGCTCCATCTAAACCTTTGAAATCTAGGCCTCTG
GAGACAAGGGGGATCCTTCAAGAACTGGAACAAAGCAGCAATGAAGGGAAGAGAAAGGAA
GATCCAGGGAAGATGATGACTAGTAATAATAATCAACAAGGACAGAGAGGTGCTGCTATT
GTTGCTGAAAAAGAAGCTGCAAGAGCTTTGGATGTTTTCTGGTTCTTGAAGCCTTGCACA
CTTGCTAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012176
PEP Infomation

pacid=37435770 transcript=PGSC0003DMT400017716 locus=PGSC0003DMG400006871 ID=PGSC0003DMT400017716.v4.03 annot-version=v4.03
Sequence

MEIAVIDWKTIDSRFVKDDLYEHFKAPQWVDFFAPDAPVDDDAWFCRPECNHPKTLEDFY
KVATPSSSSKLQRSASVSDIPLGERNRRDATLKKRGLIQPLISLNKDLKCDKIVEDSENQ
NPNFATPPRFFKAKLMKQTIKSSAEKKPVDEKEEHIPKLKSTLSARNLFAGGDLLNKVSE
FCNELKRLVVTRTKEREKCADENLPLIVDDKERERKPLLEMTKETNELVAKSNTKEKQRR
KLRNDNAENTPILVDVKNIKRRDEEILSQIRTNPPTPQCFSASRGVTKAAPSKPLKSRPL
ETRGILQELEQSSNEGKRKEDPGKMMTSNNNQQGQRGAAIVAEKEAARALDVFWFLKPCT
LAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400017716
Transcript Infomation

pacid=37435770 locus=PGSC0003DMG400006871 ID=PGSC0003DMT400017716.v4.03 annot-version=v4.03
Sequence

ATGGAGATAGCTGTCATTGATTGGAAAACCATTGATTCAAGATTTGTTAAAGACGATCTT
TATGAGCATTTTAAAGCTCCTCAATGGGTTGATTTTTTCGCCCCCGATGCTCCTGTTGAT
GATGATGCTTGGTTCTGCAGACCTGAGTGTAATCATCCAAAGACTCTGGAAGATTTCTAT
AAAGTAGCTACCCCTTCCTCCTCTTCGAAGCTTCAAAGATCAGCTAGTGTATCTGATATT
CCTCTTGGGGAACGAAATAGGAGAGATGCAACATTGAAGAAGAGAGGGCTAATTCAACCG
CTGATATCATTGAATAAAGACTTGAAATGTGATAAGATTGTTGAAGATAGTGAAAATCAG
AATCCCAATTTTGCAACCCCTCCAAGGTTCTTCAAGGCTAAATTGATGAAACAAACAATC
AAGTCGAGCGCGGAGAAGAAGCCAGTTGATGAAAAAGAGGAACATATACCAAAGCTGAAA
AGTACTCTTTCAGCTAGGAATCTTTTTGCTGGTGGGGATTTGTTGAACAAGGTGTCTGAG
TTTTGCAATGAGCTGAAGAGACTGGTAGTTACCAGGACTAAAGAGAGAGAGAAATGTGCA
GATGAGAACTTGCCACTAATTGTTGATGATAAAGAAAGGGAAAGGAAGCCATTGCTGGAG
ATGACTAAAGAAACTAATGAACTAGTGGCAAAGAGCAACACTAAGGAGAAACAGAGAAGG
AAACTGAGAAATGATAATGCAGAAAACACACCAATACTTGTGGATGTGAAGAACATTAAG
CGCAGAGATGAAGAGATCTTGTCTCAAATCCGCACAAATCCTCCCACTCCTCAGTGTTTC
TCAGCCAGCCGGGGAGTTACAAAGGCCGCTCCATCTAAACCTTTGAAATCTAGGCCTCTG
GAGACAAGGGGGATCCTTCAAGAACTGGAACAAAGCAGCAATGAAGGGAAGAGAAAGGAA
GATCCAGGGAAGATGATGACTAGTAATAATAATCAACAAGGACAGAGAGGTGCTGCTATT
GTTGCTGAAAAAGAAGCTGCAAGAGCTTTGGATGTTTTCTGGTTCTTGAAGCCTTGCACA
CTTGCTAGCTGA