Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017679
CDS Infomation

pacid=37441233 polypeptide=PGSC0003DMP400012151 locus=PGSC0003DMG400006859 ID=PGSC0003DMT400017679.v4.03 annot-version=v4.03
Sequence

ATGAAGAGATTGAGGTCTAGTGATGATCTTGAATCATGCGGGGAGAAAGGTGTGTTGAAA
GATTGGGCTAGAAGGGAGGAAGATCCGAGTTTGCATCGTTCATCTTCCAACAGGAGCTTT
TATTACAAGTCTGAGAGTGGGAGAAAGGGATTATCTTCTTCGTCGTCTAGATATGATAGG
TTTGAGGATGACCGTGAGAGTCTGAGACCGATAAAGAAGAGATCAGATTATGATTTGGAC
AACTATGATAGGCGGAAGAGTTACAATCGATACAGTCATAGTAATGATAAAGGGGTTCTA
AGCTCTTCTCCAAGGGGTGGATATGGTGCTGAAAGGATTCATAGGTCAGAGAGTTTTTCT
GGACCAAGGAGGGAAGTCCCAAAGGGGTTCAGATCAGAGAGGGATAGGTCCAGGCGAGAG
GGGAGTGTGTCATCATGGCGCAGGTTTGGTGGCGTGAAAGATAGTGATGAAGGTGCGAGG
AGTGGTGGGGATTCAGCAAGAGGAAGTAGAGTAGAATCAGAAGATATTGACAAGGCAAAG
TCACCCCCAGGATGGCGAGATGCAAAATCACCTGCTTGGTCAAAGGACTCTGGTAGTGAG
CAATCAAGGAGTGTTGAAGTTAAGAAAAGTGAAGGCTTGCCAATGGAGAATGGTGGACAT
AGCAGTGAAATGGAAGAGGGGGAACTGGAGCCTGATCATCCATCTTCTGCCACTGAGCCT
GCTGCTGAAGATGAAGCTTCTGGTGAGGTGAACCGCTCACAGATGGAGCATGAGAGTGAG
CGTCAAGTTGATAGTAAGAGACAAGATGATGGGGTTAATTCTTTGTACGACCAGAAGGTT
GAGCTCAGTAAAGTAAGTATTACTGCTGAGCAGTCGGAAGAAACACAGTCAGATAATGTC
CAAGACATTTTCAAGGACGGTGATGGTTTGTCTGATCACGGCACTTCAATGGGGCACAGT
GGAATGGGAAATGGAACTGAGACTCTGATAGATCATGTTGGTGAAAAGAATGGGTCCACT
AGGAAAAGCAATGGTTCTAGGGAAGAAGAAAAGAATGTAGATGCTGAGAAGTTACCACCT
AAAAAGAGGGAACAAGGGGAGGAGAAAAACAGAGATGCTAAATCTAAGATAAATTGTATT
GAGATCCATGAATTAAATAGGGAGCTTGTTGGGGAAGGTGGACCACCAGACTCTGTTTCT
TCTGTTGCACATGAAGATGTATCACTAAGTGTCAAGGACAAGGGAAAATGTCTTGCTGTT
TCGCCTGATAATATCACTACCCCTCCTGCAGATGGTTTGATGATGGATAACGAGCCAAGA
GGCATTGTTCCTTGTGGAAACTCTGATATGGAAGGACCAAGTACGAGGGGCCTTGACTTG
TTCTTGTCTGGTCCTGTCAAAAAACCTGAGAAAGCAGACAAATTTAGTAATTGCATGACC
AAAGATGAAAAGTTTGGTCTGGAACCACTTGAGCTTTCTCTTAGCTTGCCAAATGTCCTG
TTGCCTATTGGTGCACAGAATGAAGTCCAACCTCCTGGTTCTCCTAGTCAAGGAAGGAGT
TTCCAATCCTTTGCCAGCTCATTTCACACAAATTCTGATGGCTTTACCATGTCTATGTCC
TTTTCAGGGTCACAACACTTCACTCATAATCCTAGCTGCTCAATGACACATAATTCAGTT
GATTATGAGCAATCTGTTAAAAGTCGCCCCCTCTTTCAAGGTGTCGATTGGCAAGCTCTC
GCTTCAAATGAGCAGAAGAATAATGACATCCCAAATTGTCAAGGCATGTTATCAAATGGA
ACTGGTCTGTATCAGCAGTCTCAAGCATCTCAAGGAAATTCTAGTGGTCAAGCTGTAGCA
AAACATCTCAGAGCTGCAGAGGAAAGCTCTAGATTACCTGCTGGGCTGGACAGGCAACTA
AGTACTGGTAAAGCATCTCGTCATCCAAATGGAGCTAGATCTCCTACACAGAGTGTTGGG
TCTCATGAAACTGGGTCAGAATACAATAAAGATAAGAAACAATTAACTAAAGCAAAAGAT
AGTAGCTTTTATAGGTTCGGTGGTTCTGATGGCAAAGAGCTCCAACTGCCTGTTGGGCCT
GACTTCATCGAATCAGTAATCACAATCATGGTTTCTGAACCAATACATGTGACTGCCAGG
AGGTTTAATGAGATCTCTGGGCAACAGTTGCTTTGTGTGAAAGAGGCACTCTGCGACATC
ATCACAAATCCTGGCAATCATTGGCAACTTAGTACTCTGCAAAAGGCACTGCAGAAGAGG
TCTGACATCACTTTGGATACACTACTGAAATCCCACAGGAGTCAACTAGAGTTGTTGGTG
GCTCTGAAAACTGGTCTCCAAGAATTTCTTCGGCCAAGTTATGATGTTTCTACATCTGAC
TTGGCGGACATATTTCTGAATTTAAGATGTAGAAATCTCACTTGTCGATCTCCGTTGCCT
GTGGATGAATGTGAGTGCAAAGTATGCTCACAGAAGAATGGTTTCTGCAGTGCTTGCATG
TGTCTTGTGTGTTCCAAGTTTGACATGGCATCTAATACGTGTAGCTGGGTTGGATGTGAT
GTATGTCTGCATTGGTGTCACGCTGATTGTGGGCTACGTGAATCTTACATCAGGAATGGA
CGTAGTGCTTCTGGTGCAAAGGGTTGTGTAGAGATGCAATTTCATTGCGTTGCCTGTAAC
CATCCATCTGAAATGTTCGGCTTTGTAAAAGAGGTTTTCCAAAACTTTGCAAAGGAATGG
ACGGCAGAAGCATTTTCCAAGGAGCTTGAATATGTGAAAAGAATTTTTTGTGCCAGCGAG
GACATCAGAGGGAAACGCTTGCATGACATTGCTAATTATATGCTGTCAAAACTGGCAATT
AAGGCTGACCTTCAAGAAGTTCAAAGTCAAATGATGCATTTCTTCCTGACAGAGCCTGAT
TCAGTCAAATCTGACAATGCTCCAATTATTCAAGGAAAGGAGTTGTCAACAAAGAACCAT
GAAGGAAACAATGGTATTGCTCGGCCCAGCCAGGGAGCGATGTGGCTAAAATCAGTTAGT
TCTGAGAAGGCTCCTCAAGTGGAAAAGCCTACAGGTTTGCCTTCAAGTTTTGATAGCCTC
CGGAATGAAAAGCAGGCAATGAGCTTGAGTTTTCAGCCAAGTATGGAAAAGGGACCAGTA
TTTGATGAACTAGAGAGCATTGTTAGGATCAAACAGGCAGAAGCTAAAATGTTCCAAGCG
CGAGCGGATGAAGCTAGGAGAGAGGCTGATGCTCTGAAACGCATTGGTGTAACTAAGAGT
GAGAGAATTGAAGAAGAATATGTAACTAGAATCACAAAGTTGCGATTGGCTGAAGCTGAG
GATATGCGGAAACAAAAGTTGCAAGAGCTGCAGTCTTTAGAAAGAGCTTATCAGGACTAC
TTCAATATGAAGATGAGAATGGAAAATAAGATCAAAGATCTCTTGTTGAAAATGGAAGCT
ACTAGAAGGAATCTCAGTTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012151
PEP Infomation

pacid=37441233 transcript=PGSC0003DMT400017679 locus=PGSC0003DMG400006859 ID=PGSC0003DMT400017679.v4.03 annot-version=v4.03
Sequence

MKRLRSSDDLESCGEKGVLKDWARREEDPSLHRSSSNRSFYYKSESGRKGLSSSSSRYDR
FEDDRESLRPIKKRSDYDLDNYDRRKSYNRYSHSNDKGVLSSSPRGGYGAERIHRSESFS
GPRREVPKGFRSERDRSRREGSVSSWRRFGGVKDSDEGARSGGDSARGSRVESEDIDKAK
SPPGWRDAKSPAWSKDSGSEQSRSVEVKKSEGLPMENGGHSSEMEEGELEPDHPSSATEP
AAEDEASGEVNRSQMEHESERQVDSKRQDDGVNSLYDQKVELSKVSITAEQSEETQSDNV
QDIFKDGDGLSDHGTSMGHSGMGNGTETLIDHVGEKNGSTRKSNGSREEEKNVDAEKLPP
KKREQGEEKNRDAKSKINCIEIHELNRELVGEGGPPDSVSSVAHEDVSLSVKDKGKCLAV
SPDNITTPPADGLMMDNEPRGIVPCGNSDMEGPSTRGLDLFLSGPVKKPEKADKFSNCMT
KDEKFGLEPLELSLSLPNVLLPIGAQNEVQPPGSPSQGRSFQSFASSFHTNSDGFTMSMS
FSGSQHFTHNPSCSMTHNSVDYEQSVKSRPLFQGVDWQALASNEQKNNDIPNCQGMLSNG
TGLYQQSQASQGNSSGQAVAKHLRAAEESSRLPAGLDRQLSTGKASRHPNGARSPTQSVG
SHETGSEYNKDKKQLTKAKDSSFYRFGGSDGKELQLPVGPDFIESVITIMVSEPIHVTAR
RFNEISGQQLLCVKEALCDIITNPGNHWQLSTLQKALQKRSDITLDTLLKSHRSQLELLV
ALKTGLQEFLRPSYDVSTSDLADIFLNLRCRNLTCRSPLPVDECECKVCSQKNGFCSACM
CLVCSKFDMASNTCSWVGCDVCLHWCHADCGLRESYIRNGRSASGAKGCVEMQFHCVACN
HPSEMFGFVKEVFQNFAKEWTAEAFSKELEYVKRIFCASEDIRGKRLHDIANYMLSKLAI
KADLQEVQSQMMHFFLTEPDSVKSDNAPIIQGKELSTKNHEGNNGIARPSQGAMWLKSVS
SEKAPQVEKPTGLPSSFDSLRNEKQAMSLSFQPSMEKGPVFDELESIVRIKQAEAKMFQA
RADEARREADALKRIGVTKSERIEEEYVTRITKLRLAEAEDMRKQKLQELQSLERAYQDY
FNMKMRMENKIKDLLLKMEATRRNLSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400017679
Transcript Infomation

pacid=37441233 locus=PGSC0003DMG400006859 ID=PGSC0003DMT400017679.v4.03 annot-version=v4.03
Sequence

ATGAAGAGATTGAGGTCTAGTGATGATCTTGAATCATGCGGGGAGAAAGGTGTGTTGAAA
GATTGGGCTAGAAGGGAGGAAGATCCGAGTTTGCATCGTTCATCTTCCAACAGGAGCTTT
TATTACAAGTCTGAGAGTGGGAGAAAGGGATTATCTTCTTCGTCGTCTAGATATGATAGG
TTTGAGGATGACCGTGAGAGTCTGAGACCGATAAAGAAGAGATCAGATTATGATTTGGAC
AACTATGATAGGCGGAAGAGTTACAATCGATACAGTCATAGTAATGATAAAGGGGTTCTA
AGCTCTTCTCCAAGGGGTGGATATGGTGCTGAAAGGATTCATAGGTCAGAGAGTTTTTCT
GGACCAAGGAGGGAAGTCCCAAAGGGGTTCAGATCAGAGAGGGATAGGTCCAGGCGAGAG
GGGAGTGTGTCATCATGGCGCAGGTTTGGTGGCGTGAAAGATAGTGATGAAGGTGCGAGG
AGTGGTGGGGATTCAGCAAGAGGAAGTAGAGTAGAATCAGAAGATATTGACAAGGCAAAG
TCACCCCCAGGATGGCGAGATGCAAAATCACCTGCTTGGTCAAAGGACTCTGGTAGTGAG
CAATCAAGGAGTGTTGAAGTTAAGAAAAGTGAAGGCTTGCCAATGGAGAATGGTGGACAT
AGCAGTGAAATGGAAGAGGGGGAACTGGAGCCTGATCATCCATCTTCTGCCACTGAGCCT
GCTGCTGAAGATGAAGCTTCTGGTGAGGTGAACCGCTCACAGATGGAGCATGAGAGTGAG
CGTCAAGTTGATAGTAAGAGACAAGATGATGGGGTTAATTCTTTGTACGACCAGAAGGTT
GAGCTCAGTAAAGTAAGTATTACTGCTGAGCAGTCGGAAGAAACACAGTCAGATAATGTC
CAAGACATTTTCAAGGACGGTGATGGTTTGTCTGATCACGGCACTTCAATGGGGCACAGT
GGAATGGGAAATGGAACTGAGACTCTGATAGATCATGTTGGTGAAAAGAATGGGTCCACT
AGGAAAAGCAATGGTTCTAGGGAAGAAGAAAAGAATGTAGATGCTGAGAAGTTACCACCT
AAAAAGAGGGAACAAGGGGAGGAGAAAAACAGAGATGCTAAATCTAAGATAAATTGTATT
GAGATCCATGAATTAAATAGGGAGCTTGTTGGGGAAGGTGGACCACCAGACTCTGTTTCT
TCTGTTGCACATGAAGATGTATCACTAAGTGTCAAGGACAAGGGAAAATGTCTTGCTGTT
TCGCCTGATAATATCACTACCCCTCCTGCAGATGGTTTGATGATGGATAACGAGCCAAGA
GGCATTGTTCCTTGTGGAAACTCTGATATGGAAGGACCAAGTACGAGGGGCCTTGACTTG
TTCTTGTCTGGTCCTGTCAAAAAACCTGAGAAAGCAGACAAATTTAGTAATTGCATGACC
AAAGATGAAAAGTTTGGTCTGGAACCACTTGAGCTTTCTCTTAGCTTGCCAAATGTCCTG
TTGCCTATTGGTGCACAGAATGAAGTCCAACCTCCTGGTTCTCCTAGTCAAGGAAGGAGT
TTCCAATCCTTTGCCAGCTCATTTCACACAAATTCTGATGGCTTTACCATGTCTATGTCC
TTTTCAGGGTCACAACACTTCACTCATAATCCTAGCTGCTCAATGACACATAATTCAGTT
GATTATGAGCAATCTGTTAAAAGTCGCCCCCTCTTTCAAGGTGTCGATTGGCAAGCTCTC
GCTTCAAATGAGCAGAAGAATAATGACATCCCAAATTGTCAAGGCATGTTATCAAATGGA
ACTGGTCTGTATCAGCAGTCTCAAGCATCTCAAGGAAATTCTAGTGGTCAAGCTGTAGCA
AAACATCTCAGAGCTGCAGAGGAAAGCTCTAGATTACCTGCTGGGCTGGACAGGCAACTA
AGTACTGGTAAAGCATCTCGTCATCCAAATGGAGCTAGATCTCCTACACAGAGTGTTGGG
TCTCATGAAACTGGGTCAGAATACAATAAAGATAAGAAACAATTAACTAAAGCAAAAGAT
AGTAGCTTTTATAGGTTCGGTGGTTCTGATGGCAAAGAGCTCCAACTGCCTGTTGGGCCT
GACTTCATCGAATCAGTAATCACAATCATGGTTTCTGAACCAATACATGTGACTGCCAGG
AGGTTTAATGAGATCTCTGGGCAACAGTTGCTTTGTGTGAAAGAGGCACTCTGCGACATC
ATCACAAATCCTGGCAATCATTGGCAACTTAGTACTCTGCAAAAGGCACTGCAGAAGAGG
TCTGACATCACTTTGGATACACTACTGAAATCCCACAGGAGTCAACTAGAGTTGTTGGTG
GCTCTGAAAACTGGTCTCCAAGAATTTCTTCGGCCAAGTTATGATGTTTCTACATCTGAC
TTGGCGGACATATTTCTGAATTTAAGATGTAGAAATCTCACTTGTCGATCTCCGTTGCCT
GTGGATGAATGTGAGTGCAAAGTATGCTCACAGAAGAATGGTTTCTGCAGTGCTTGCATG
TGTCTTGTGTGTTCCAAGTTTGACATGGCATCTAATACGTGTAGCTGGGTTGGATGTGAT
GTATGTCTGCATTGGTGTCACGCTGATTGTGGGCTACGTGAATCTTACATCAGGAATGGA
CGTAGTGCTTCTGGTGCAAAGGGTTGTGTAGAGATGCAATTTCATTGCGTTGCCTGTAAC
CATCCATCTGAAATGTTCGGCTTTGTAAAAGAGGTTTTCCAAAACTTTGCAAAGGAATGG
ACGGCAGAAGCATTTTCCAAGGAGCTTGAATATGTGAAAAGAATTTTTTGTGCCAGCGAG
GACATCAGAGGGAAACGCTTGCATGACATTGCTAATTATATGCTGTCAAAACTGGCAATT
AAGGCTGACCTTCAAGAAGTTCAAAGTCAAATGATGCATTTCTTCCTGACAGAGCCTGAT
TCAGTCAAATCTGACAATGCTCCAATTATTCAAGGAAAGGAGTTGTCAACAAAGAACCAT
GAAGGAAACAATGGTATTGCTCGGCCCAGCCAGGGAGCGATGTGGCTAAAATCAGTTAGT
TCTGAGAAGGCTCCTCAAGTGGAAAAGCCTACAGGTTTGCCTTCAAGTTTTGATAGCCTC
CGGAATGAAAAGCAGGCAATGAGCTTGAGTTTTCAGCCAAGTATGGAAAAGGGACCAGTA
TTTGATGAACTAGAGAGCATTGTTAGGATCAAACAGGCAGAAGCTAAAATGTTCCAAGCG
CGAGCGGATGAAGCTAGGAGAGAGGCTGATGCTCTGAAACGCATTGGTGTAACTAAGAGT
GAGAGAATTGAAGAAGAATATGTAACTAGAATCACAAAGTTGCGATTGGCTGAAGCTGAG
GATATGCGGAAACAAAAGTTGCAAGAGCTGCAGTCTTTAGAAAGAGCTTATCAGGACTAC
TTCAATATGAAGATGAGAATGGAAAATAAGATCAAAGATCTCTTGTTGAAAATGGAAGCT
ACTAGAAGGAATCTCAGTTTGTGA