Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017671
CDS Infomation

pacid=37438001 polypeptide=PGSC0003DMP400012143 locus=PGSC0003DMG400006856 ID=PGSC0003DMT400017671.v4.03 annot-version=v4.03
Sequence

ATGGTGCTCAAAGTTTCAGTTTTGCTTCTTTTTTCATTTCTCTTCACTGCCTCTGCTGTT
CGCTCAGCTCCTCCTCTTGAAGGATTACTTCCAAATGGTAATTTTGAAGAGCTACCAAAG
CCAAAAGACCTCAAGAAGAAAACAGTGCTTCAAGGTAAATATGCGTTGCCCAAATGGGAG
ATTAATGGCTTAGTGGAGTACATTTCTGGCGGGCCACAGCCTGGTGGGATGTACTTCGCA
GTTGCCCACGGTGTCCACGCTGTGAGGCTTGGGAATGAGGCTTCAATTTCTCAGACAATT
CCAGTCAAGAAAGGCTCTTTGTATGCACTCACATTTGGGGCATCAAGAACTTGTGCTCAA
GAAGAGGTGTTGAGGGTGTCAGTGCCTCCTCAAACAGGAGACCTTCCTTTGCAGACCCTT
TATAGCAGCAATGGTGGTGATACTTATGCTTGGGGTTTCTATGCCACCTCTAATGTTGTT
AAAGTTACCTTTCATAATCCTGGAGTTCAAGAGGATCCTGCTTGTGGTCCACTCTTGGAT
GCCGTTGCTATCAAAGAACTTTTTCCACCTCGCCCTACAAGAGTGAACTTGGTTAAAAAT
GCTGGTTTTGAAGAAGGACCTCACCTCTTGATAAACTCTTCACATGGAGTTCTCCTCCCT
CCCAAGCAGGAAGATTTGACATCCCCACTTCCAGGATGGATCATTGAGTCACTCAAAGCA
GTGAAATTCTTGGATTCAGCTCATTTCAATGTCCCGTTTGGCCAAGCTGCAGTGGAACTT
CTTGCAGGGAGAGAAAGTGCTCTCGCCCAAATCATTAGGACAGTCCCTAAGAAGGTCTAC
GCCTTCACATTCAGTGTTGGTGATGCAAAGAACGGTTGTCATGGTGATATGATGGTTGAA
GCATTTGCTGCTAAAGAAACGTTCAAAGTTCCCTTCAAATCACAAGGCAAAGGCAGCTTC
AAAACTGTTAGTTTCAAGTTCACAGCTATTGCAGACAGGACCAGAATTACTTTCTACAGC
TCTTTTTACCACACAAAGATCAATGACTACGGCGCTCTTTGTGGCCCTGTTGTTGATGAA
GTTAAGGTGACCCCTGTTGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012143
PEP Infomation

pacid=37438001 transcript=PGSC0003DMT400017671 locus=PGSC0003DMG400006856 ID=PGSC0003DMT400017671.v4.03 annot-version=v4.03
Sequence

MVLKVSVLLLFSFLFTASAVRSAPPLEGLLPNGNFEELPKPKDLKKKTVLQGKYALPKWE
INGLVEYISGGPQPGGMYFAVAHGVHAVRLGNEASISQTIPVKKGSLYALTFGASRTCAQ
EEVLRVSVPPQTGDLPLQTLYSSNGGDTYAWGFYATSNVVKVTFHNPGVQEDPACGPLLD
AVAIKELFPPRPTRVNLVKNAGFEEGPHLLINSSHGVLLPPKQEDLTSPLPGWIIESLKA
VKFLDSAHFNVPFGQAAVELLAGRESALAQIIRTVPKKVYAFTFSVGDAKNGCHGDMMVE
AFAAKETFKVPFKSQGKGSFKTVSFKFTAIADRTRITFYSSFYHTKINDYGALCGPVVDE
VKVTPVA*

Transcript Sequence

Transcript ID

PGSC0003DMT400017671
Transcript Infomation

pacid=37438001 locus=PGSC0003DMG400006856 ID=PGSC0003DMT400017671.v4.03 annot-version=v4.03
Sequence

ATGGTGCTCAAAGTTTCAGTTTTGCTTCTTTTTTCATTTCTCTTCACTGCCTCTGCTGTT
CGCTCAGCTCCTCCTCTTGAAGGATTACTTCCAAATGGTAATTTTGAAGAGCTACCAAAG
CCAAAAGACCTCAAGAAGAAAACAGTGCTTCAAGGTAAATATGCGTTGCCCAAATGGGAG
ATTAATGGCTTAGTGGAGTACATTTCTGGCGGGCCACAGCCTGGTGGGATGTACTTCGCA
GTTGCCCACGGTGTCCACGCTGTGAGGCTTGGGAATGAGGCTTCAATTTCTCAGACAATT
CCAGTCAAGAAAGGCTCTTTGTATGCACTCACATTTGGGGCATCAAGAACTTGTGCTCAA
GAAGAGGTGTTGAGGGTGTCAGTGCCTCCTCAAACAGGAGACCTTCCTTTGCAGACCCTT
TATAGCAGCAATGGTGGTGATACTTATGCTTGGGGTTTCTATGCCACCTCTAATGTTGTT
AAAGTTACCTTTCATAATCCTGGAGTTCAAGAGGATCCTGCTTGTGGTCCACTCTTGGAT
GCCGTTGCTATCAAAGAACTTTTTCCACCTCGCCCTACAAGAGTGAACTTGGTTAAAAAT
GCTGGTTTTGAAGAAGGACCTCACCTCTTGATAAACTCTTCACATGGAGTTCTCCTCCCT
CCCAAGCAGGAAGATTTGACATCCCCACTTCCAGGATGGATCATTGAGTCACTCAAAGCA
GTGAAATTCTTGGATTCAGCTCATTTCAATGTCCCGTTTGGCCAAGCTGCAGTGGAACTT
CTTGCAGGGAGAGAAAGTGCTCTCGCCCAAATCATTAGGACAGTCCCTAAGAAGGTCTAC
GCCTTCACATTCAGTGTTGGTGATGCAAAGAACGGTTGTCATGGTGATATGATGGTTGAA
GCATTTGCTGCTAAAGAAACGTTCAAAGTTCCCTTCAAATCACAAGGCAAAGGCAGCTTC
AAAACTGTTAGTTTCAAGTTCACAGCTATTGCAGACAGGACCAGAATTACTTTCTACAGC
TCTTTTTACCACACAAAGATCAATGACTACGGCGCTCTTTGTGGCCCTGTTGTTGATGAA
GTTAAGGTGACCCCTGTTGCTTAG