Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017668
CDS Infomation

pacid=37437252 polypeptide=PGSC0003DMP400012142 locus=PGSC0003DMG400006855 ID=PGSC0003DMT400017668.v4.03 annot-version=v4.03
Sequence

ATGTCAAAACAAGGGGCTTTTGATCTGGCATTTGGGGTTGGAGGAAGAATTGGCAAGGAT
GACGTTCTCTCAGCTGTTGACAAGTATGAGAAGTACCATGGTTATTATGGAGGTGAAGAA
GACGAGAGAAAGAATAACTACACTGACATGGTAAACAAATACTATGATCTTTGCACCAGC
TTCTATGAATACGGCTGGGGAGAGTCATTCCATTTTGCACCCAGATGGAAAGGAGAATCA
CTCCAGGAAAGCATTAAGAGGCATGAGCACTTCCTTGCCTTGCAATTGGGATTGAAACCA
GGACAAAAGGTCTTGGATGTAGGATGTGGAATTGGAGGGCCGTTAAGAGAAATTGCTCGA
TTCAGCTCTACATCAGTTACAGGCCTCAACAACAATGAATATCAGATATCTAGGGGACAG
GTGTTGAACCGCAAAGTGGGATTGGATCAAACTTGCAACTTTGTAAAGGGTGATTTCATG
AAAATGCCATTCCCTGACAATAGCTTTGATGCAGTATACGCCATAGAAGCTACCTGCCAT
GCACCAGATCCGGTTGGATGCTATAGAGAGATCTATAGGGTGCTGAAGCCTGGTCAGTGC
TTTGCTGTGTATGAGTGGTGCATGACTGATGCATACAATCCAAATAATGAAGAGCAGAAA
AGGATCAAGGAAGAAATTGAGCTCGGAAATGGTCTCCCGGAGATTCGATCGACACAAAAG
TGCCTAGAAGCAGCGAGAAAAGCTGGTTTTGAAGTTGTGTGGGATAAGGATCTCGCTGAA
GACTCACCTGTTTCATGGTACATGCCTTTAGATACAAGTCACTTCTCACTCAGTAGCTTC
CGCCTAACAGCAGTTGGCAGACTTTTCACCAGAAATCTGGTGTCGGCACTTGAATACGTG
GGAGTAGCTCCTAAAGGTAGTCAAAGGGTTCAAGCTTTCTTAGAAAAAGCTGCAGAAGGT
CTTGTTGGTGGTGCCAAGAAAGGGATCTTCACACCGATGTATTTCTTCTTGGTTCGCAAG
CCAATTTCAGACTCACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012142
PEP Infomation

pacid=37437252 transcript=PGSC0003DMT400017668 locus=PGSC0003DMG400006855 ID=PGSC0003DMT400017668.v4.03 annot-version=v4.03
Sequence

MSKQGAFDLAFGVGGRIGKDDVLSAVDKYEKYHGYYGGEEDERKNNYTDMVNKYYDLCTS
FYEYGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREIAR
FSSTSVTGLNNNEYQISRGQVLNRKVGLDQTCNFVKGDFMKMPFPDNSFDAVYAIEATCH
APDPVGCYREIYRVLKPGQCFAVYEWCMTDAYNPNNEEQKRIKEEIELGNGLPEIRSTQK
CLEAARKAGFEVVWDKDLAEDSPVSWYMPLDTSHFSLSSFRLTAVGRLFTRNLVSALEYV
GVAPKGSQRVQAFLEKAAEGLVGGAKKGIFTPMYFFLVRKPISDSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400017668
Transcript Infomation

pacid=37437252 locus=PGSC0003DMG400006855 ID=PGSC0003DMT400017668.v4.03 annot-version=v4.03
Sequence

ATGTCAAAACAAGGGGCTTTTGATCTGGCATTTGGGGTTGGAGGAAGAATTGGCAAGGAT
GACGTTCTCTCAGCTGTTGACAAGTATGAGAAGTACCATGGTTATTATGGAGGTGAAGAA
GACGAGAGAAAGAATAACTACACTGACATGGTAAACAAATACTATGATCTTTGCACCAGC
TTCTATGAATACGGCTGGGGAGAGTCATTCCATTTTGCACCCAGATGGAAAGGAGAATCA
CTCCAGGAAAGCATTAAGAGGCATGAGCACTTCCTTGCCTTGCAATTGGGATTGAAACCA
GGACAAAAGGTCTTGGATGTAGGATGTGGAATTGGAGGGCCGTTAAGAGAAATTGCTCGA
TTCAGCTCTACATCAGTTACAGGCCTCAACAACAATGAATATCAGATATCTAGGGGACAG
GTGTTGAACCGCAAAGTGGGATTGGATCAAACTTGCAACTTTGTAAAGGGTGATTTCATG
AAAATGCCATTCCCTGACAATAGCTTTGATGCAGTATACGCCATAGAAGCTACCTGCCAT
GCACCAGATCCGGTTGGATGCTATAGAGAGATCTATAGGGTGCTGAAGCCTGGTCAGTGC
TTTGCTGTGTATGAGTGGTGCATGACTGATGCATACAATCCAAATAATGAAGAGCAGAAA
AGGATCAAGGAAGAAATTGAGCTCGGAAATGGTCTCCCGGAGATTCGATCGACACAAAAG
TGCCTAGAAGCAGCGAGAAAAGCTGGTTTTGAAGTTGTGTGGGATAAGGATCTCGCTGAA
GACTCACCTGTTTCATGGTACATGCCTTTAGATACAAGTCACTTCTCACTCAGTAGCTTC
CGCCTAACAGCAGTTGGCAGACTTTTCACCAGAAATCTGGTGTCGGCACTTGAATACGTG
GGAGTAGCTCCTAAAGGTAGTCAAAGGGTTCAAGCTTTCTTAGAAAAAGCTGCAGAAGGT
CTTGTTGGTGGTGCCAAGAAAGGGATCTTCACACCGATGTATTTCTTCTTGGTTCGCAAG
CCAATTTCAGACTCACAGTAA