Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017657
CDS Infomation

pacid=37440130 polypeptide=PGSC0003DMP400012136 locus=PGSC0003DMG400006851 ID=PGSC0003DMT400017657.v4.03 annot-version=v4.03
Sequence

ATGTCGATGGATTCCGAAGATCCGATGGACGAAGCTTCACCGGTCACCGGATTTCTCCCA
CTGGCGTCGGCTTCACAACAGCCTTACATCTCCGAACTCCTTTCTTTCACTCTCGATCGT
CTTCACAAAGAACCGGAGCTTCTGAGAGTGGATGCAGAGAGAATTCGGAGGCAGATGCAA
GAGGTTGCCGTTGGAAACTACCGTGCCTTCATTTCTGCTGCTGATGCACTACATGCGATT
CGGGAAGAAGTTTCTTCTGTTGATAAGCATCTTGACTCCTTGATCAATGAGATACCTAAG
CTAACTTCAGGTTGCAGTGAGTTCAGCACCTCTGCAGAACTTATCTTGGAGAAAAGGAAG
ATGAATCAAACATTGCTTGCAAACCATAGTACTCTGCTTGACTTGCTTGAAATTCCTCAG
CTAATGGACACATGTGTGAGGAATGGAAACTATGATGAAGCTCTTGATTTAGAAGCATTT
GTTTCCAAGCTTTCAGCAATGCACCCCAAGTTACCAGTCATTCAAGCCCTTGCTGCAGAA
GTTCGGCAGACCACCCAATCTCTTCTTTTTCAGCTTCTCCAAAGACTTAGGTCAAACATT
CAGTTGCCGGAATGCCTCCGTATCATTGGATACTTGCGTCGTATAGGGGTGTTCAATGAG
TATGAGATGCGCTTACAGTTTCTAAGGTGCCGTCAGGCATGGCTTTCTGGGATCCTTGAT
GACTTGGACCAGAGAAATGCTTATGAATACCTCAAAGGAATGGTAAATTGTCATCGGATG
CATCTCTTTGATGTTGTTAACCAGTACCGTGCGATATTTGCTGATGATACTTCCGGGAGG
GAAGAAAACTATGATGGTGGGCTTCTCTTCAGTTGGGCCATGCATCAAATTTCTTCCCAC
CTTAGAACTCTAAAGATGATGCTACCGAAGATCACTGAAGGAGGTTCTTTATCAAACATT
CTTGATCAATGCATGTATTGTGCTATGGGGCTTGGTTGGGTTGGATTGGACTTCCGTGGC
TTGCTTCCCCCTCTTTTTGAAGAGGCGGTCCTAAATCTGTTTTCGAAGAACATGAATGCA
GCTGTTGAGAATTTCCAGTTGGTCCTCGATTCTCATCGGTGGGTTCCATTACCAGCAGTT
GGATTTTCTACCAGCAGTTTGAGTGAAGAAAGTCATGAAGATGTTACTCCTCCCTCAAGT
CTAATGGAGCACCCACCTCTGGCTGTCTTTGTTAATGGTGTCTCTGCGGCAATGAATGAG
TTACGACCTTGTGCTCCCTTGAGTTTAAAACATGTGCTTGCACAAGAACTGGCGAAAGGA
TTGCAGGCTGTTTCTGATGCTTTACTGAGATATAACACTACTCGCATGCTTCGAGAAAAT
GAGTCTCTGCTTTTCCTATCACTATGTCGAGCATTTATTGAGGTTGCTTTCCCACACTGT
GTTACTTGTTTTGGTCGTTGTTATCCTGGTGGAGCTGCTCTTATAGCCGATGCCACAACT
CTATTCGACGGAATTAGCCGATTATTGGCAACCTCTTCCTCCAGAGAACTTCCAAAACCA
GTTCGTAATCCAGAGGTCAATAGTATATCAGAAAATGGGGACGTACCTAAGAAGGAAAAT
GGGGAAATTCCTAGTACTGAACAACCTGAGAGTACGAACGCAGAAGAGGAACCCAATAAT
GTCCCCTCAGAAAACGAGGAGAAGCCTGGTAATGTGAAGAGCATATGCATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012136
PEP Infomation

pacid=37440130 transcript=PGSC0003DMT400017657 locus=PGSC0003DMG400006851 ID=PGSC0003DMT400017657.v4.03 annot-version=v4.03
Sequence

MSMDSEDPMDEASPVTGFLPLASASQQPYISELLSFTLDRLHKEPELLRVDAERIRRQMQ
EVAVGNYRAFISAADALHAIREEVSSVDKHLDSLINEIPKLTSGCSEFSTSAELILEKRK
MNQTLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVSKLSAMHPKLPVIQALAAE
VRQTTQSLLFQLLQRLRSNIQLPECLRIIGYLRRIGVFNEYEMRLQFLRCRQAWLSGILD
DLDQRNAYEYLKGMVNCHRMHLFDVVNQYRAIFADDTSGREENYDGGLLFSWAMHQISSH
LRTLKMMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAVLNLFSKNMNA
AVENFQLVLDSHRWVPLPAVGFSTSSLSEESHEDVTPPSSLMEHPPLAVFVNGVSAAMNE
LRPCAPLSLKHVLAQELAKGLQAVSDALLRYNTTRMLRENESLLFLSLCRAFIEVAFPHC
VTCFGRCYPGGAALIADATTLFDGISRLLATSSSRELPKPVRNPEVNSISENGDVPKKEN
GEIPSTEQPESTNAEEEPNNVPSENEEKPGNVKSICI*

Transcript Sequence

Transcript ID

PGSC0003DMT400017657
Transcript Infomation

pacid=37440130 locus=PGSC0003DMG400006851 ID=PGSC0003DMT400017657.v4.03 annot-version=v4.03
Sequence

ATGTCGATGGATTCCGAAGATCCGATGGACGAAGCTTCACCGGTCACCGGATTTCTCCCA
CTGGCGTCGGCTTCACAACAGCCTTACATCTCCGAACTCCTTTCTTTCACTCTCGATCGT
CTTCACAAAGAACCGGAGCTTCTGAGAGTGGATGCAGAGAGAATTCGGAGGCAGATGCAA
GAGGTTGCCGTTGGAAACTACCGTGCCTTCATTTCTGCTGCTGATGCACTACATGCGATT
CGGGAAGAAGTTTCTTCTGTTGATAAGCATCTTGACTCCTTGATCAATGAGATACCTAAG
CTAACTTCAGGTTGCAGTGAGTTCAGCACCTCTGCAGAACTTATCTTGGAGAAAAGGAAG
ATGAATCAAACATTGCTTGCAAACCATAGTACTCTGCTTGACTTGCTTGAAATTCCTCAG
CTAATGGACACATGTGTGAGGAATGGAAACTATGATGAAGCTCTTGATTTAGAAGCATTT
GTTTCCAAGCTTTCAGCAATGCACCCCAAGTTACCAGTCATTCAAGCCCTTGCTGCAGAA
GTTCGGCAGACCACCCAATCTCTTCTTTTTCAGCTTCTCCAAAGACTTAGGTCAAACATT
CAGTTGCCGGAATGCCTCCGTATCATTGGATACTTGCGTCGTATAGGGGTGTTCAATGAG
TATGAGATGCGCTTACAGTTTCTAAGGTGCCGTCAGGCATGGCTTTCTGGGATCCTTGAT
GACTTGGACCAGAGAAATGCTTATGAATACCTCAAAGGAATGGTAAATTGTCATCGGATG
CATCTCTTTGATGTTGTTAACCAGTACCGTGCGATATTTGCTGATGATACTTCCGGGAGG
GAAGAAAACTATGATGGTGGGCTTCTCTTCAGTTGGGCCATGCATCAAATTTCTTCCCAC
CTTAGAACTCTAAAGATGATGCTACCGAAGATCACTGAAGGAGGTTCTTTATCAAACATT
CTTGATCAATGCATGTATTGTGCTATGGGGCTTGGTTGGGTTGGATTGGACTTCCGTGGC
TTGCTTCCCCCTCTTTTTGAAGAGGCGGTCCTAAATCTGTTTTCGAAGAACATGAATGCA
GCTGTTGAGAATTTCCAGTTGGTCCTCGATTCTCATCGGTGGGTTCCATTACCAGCAGTT
GGATTTTCTACCAGCAGTTTGAGTGAAGAAAGTCATGAAGATGTTACTCCTCCCTCAAGT
CTAATGGAGCACCCACCTCTGGCTGTCTTTGTTAATGGTGTCTCTGCGGCAATGAATGAG
TTACGACCTTGTGCTCCCTTGAGTTTAAAACATGTGCTTGCACAAGAACTGGCGAAAGGA
TTGCAGGCTGTTTCTGATGCTTTACTGAGATATAACACTACTCGCATGCTTCGAGAAAAT
GAGTCTCTGCTTTTCCTATCACTATGTCGAGCATTTATTGAGGTTGCTTTCCCACACTGT
GTTACTTGTTTTGGTCGTTGTTATCCTGGTGGAGCTGCTCTTATAGCCGATGCCACAACT
CTATTCGACGGAATTAGCCGATTATTGGCAACCTCTTCCTCCAGAGAACTTCCAAAACCA
GTTCGTAATCCAGAGGTCAATAGTATATCAGAAAATGGGGACGTACCTAAGAAGGAAAAT
GGGGAAATTCCTAGTACTGAACAACCTGAGAGTACGAACGCAGAAGAGGAACCCAATAAT
GTCCCCTCAGAAAACGAGGAGAAGCCTGGTAATGTGAAGAGCATATGCATTTAG