Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017632
CDS Infomation

pacid=37439206 polypeptide=PGSC0003DMP400012119 locus=PGSC0003DMG400006839 ID=PGSC0003DMT400017632.v4.03 annot-version=v4.03
Sequence

ATGGTGTTACCTTATTGTATTCATCTTCTCTTCATTTCATGGTTTCTTTCTGCTCATATG
TTGGCTATAGCACAAAGATCCACTTACATTGTCCATATGGACAAAACCTTAATGCCTAAT
GTCTTTCCAGATCACCATCATTGGCATTCTTCCACTATTGATTCCATCAAAGCTTCTGTT
CCTTCATCAGTAGACAGATTCCACTCTGCTCCAAAACTTGTTTACTCCTATGACAATGTG
CTTCATGGCTTCAGTGCTGTTTTGTCCCAAGATGAAGTAGCAGCTTTGAAGAATTTACCA
GGTTTCATTTCAGCTTACAAAGATAGAACCGTGGAACCTCATACTACCCACACATCTGAT
TTCCTCAAACTCAATCCATCATCTGGTCTATGGCAAGCTTCTGGATTAGGACAAGATGTG
ATTATTGGAGTTTTTGACTCTGGCATCTGGCCTGAATCCGTAAGTTTCCAAGATGATGGT
ATGCCTGAAATCCCGAAAAGGTGGAAGGGAATTTGCAAGCCAGGCACTCAGTTTAACACT
TCAATGTGCAACAAGAAACTCATTGGGGCTAATTACTTCAATCAGGGTATTTTGGCGAAT
GATCCCACAGTGAACATTTCGATGAATTCTGCTAGGGATACCGATGGTCATGGTACACAT
GTAGCTTCAATAGCTGCTGGGAACTTTGCCAAAGGTGTTTCCCATTTTGGATATGCACCA
GGGACAGCTAGAGGGGTTGCACCACGAGCTAGGCTAGCTGTTTACAAGTTTAGTTTCAAA
GAAGGTACCTTTACTTCAGATTTAATTGCAGCTATGGACCAAGCTGTTGCGGATGGTGTT
GACATGATGTCCATTTCATTTGGGTCCCGTTTTGTTCCCATGTATGAAGATGCTATATCC
ATTGCTTCTTTTGGAGCTATGATGAAGGGAGTTCTTGTTTCAGCTTCAGCTGGAAATCGA
GGCCCGGATACTGGAACTTTAAAGAACGGATCTCCATGGATCTTGTGTGTGGCATCAGGC
CACACTGACCGGACATTTGCAGGAACTTTGACACTGGGAAACGGCTTAAAAATTAGGGGG
TGGAGCTTGTTTCCTGCAAGAGTCATTGTTATGGATTCAACAGTGATTTACAACAAAACT
CTATCTAATTGCAATTCCGAGGAATTGCTATCACAAGTTCCTGATCCCGAACACACCATC
ATTATATGTGATGACAGCTGGGATTTTTCTGATCAAATGCGCACTGTCAGTCGAGCAAGA
CTTAAAGCAGCCATCTTTATTTCTGAGGATCCAGGAGTGTTCAGGTCTGCTTCATTTCCC
AATCCTGGAGTTGTGATTAACAAAACTGAAGGGAAACAAGTGATCAGTTATGTACAAAAT
AGCGTCGCTCCCACAGCCAGCATCACATTCCAAGAGACGTATCTAGATGCAAAGCCAGCA
CCAGTTGTTGCTGCATCCTCCGCACGAGGACCCTCCAGAAGCTATTTGGGAATTGCAAAG
CCAGATATATTGGCACCAGGGGTGCTGATTCTTGCAGCATATCCACCAAATGTATTTGCT
ACAAGTATTGGGACGAACATAGAATTATCCTCTGATTACATTCTTGAATCAGGCACATCG
ATGGCTGCACCACATGCTGCTGGAATCGCAGCAATGCTAAAAGCCGCGCATCCTGAGTGG
AGTCCTTCAGCTATTCGCTCTGCTATGATGACCACGGCAGATCCTTTGGATAACACTGGA
AAACCAATCATAGACTCTGACATTAACAGGGAAGCCACACCCCTAGCCATGGGATCAGGG
CATGTCAATCCCAACAGAGCCCTTGACCCCGGCCTAGTATATGATGCTACTCCACAAGAT
TACGTAAATCTCTTATGCTCTATGAATTTCACAGAAGAGCAATTCAAGACAATTGCAAGA
TCATCAGCCAATCACAACTGCTCAGATCCATCAGCTGATCTCAATTACCCTTCATTCATT
GCATTGTACAGCAATGAGGGAAACTACACCTGGTTGGAGCAGAAATTCAGGAGGACAGTC
ACAAATGTTGGTCAAGGTGCAGCTACTTATAAAGCTAAGATAAAAGCTCCCAAGAACTCA
AAAGTTTCAGTGTCACCACAAACTTTGGTGTATAAGAATAAAAATGAGAAGCAAAGTTAT
ACTTTGACAATTCGTTATATAGGTCCCAATTGGAACTATGGGTCGATCACTTGGGTTGAA
GAGCACGGAAATCATACTGTTAGGAGCCCTATAGTGATATCTCCCATAATTGATCTCTGG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400012119
PEP Infomation

pacid=37439206 transcript=PGSC0003DMT400017632 locus=PGSC0003DMG400006839 ID=PGSC0003DMT400017632.v4.03 annot-version=v4.03
Sequence

MVLPYCIHLLFISWFLSAHMLAIAQRSTYIVHMDKTLMPNVFPDHHHWHSSTIDSIKASV
PSSVDRFHSAPKLVYSYDNVLHGFSAVLSQDEVAALKNLPGFISAYKDRTVEPHTTHTSD
FLKLNPSSGLWQASGLGQDVIIGVFDSGIWPESVSFQDDGMPEIPKRWKGICKPGTQFNT
SMCNKKLIGANYFNQGILANDPTVNISMNSARDTDGHGTHVASIAAGNFAKGVSHFGYAP
GTARGVAPRARLAVYKFSFKEGTFTSDLIAAMDQAVADGVDMMSISFGSRFVPMYEDAIS
IASFGAMMKGVLVSASAGNRGPDTGTLKNGSPWILCVASGHTDRTFAGTLTLGNGLKIRG
WSLFPARVIVMDSTVIYNKTLSNCNSEELLSQVPDPEHTIIICDDSWDFSDQMRTVSRAR
LKAAIFISEDPGVFRSASFPNPGVVINKTEGKQVISYVQNSVAPTASITFQETYLDAKPA
PVVAASSARGPSRSYLGIAKPDILAPGVLILAAYPPNVFATSIGTNIELSSDYILESGTS
MAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTGKPIIDSDINREATPLAMGSG
HVNPNRALDPGLVYDATPQDYVNLLCSMNFTEEQFKTIARSSANHNCSDPSADLNYPSFI
ALYSNEGNYTWLEQKFRRTVTNVGQGAATYKAKIKAPKNSKVSVSPQTLVYKNKNEKQSY
TLTIRYIGPNWNYGSITWVEEHGNHTVRSPIVISPIIDLW*

Transcript Sequence

Transcript ID

PGSC0003DMT400017632
Transcript Infomation

pacid=37439206 locus=PGSC0003DMG400006839 ID=PGSC0003DMT400017632.v4.03 annot-version=v4.03
Sequence

ATGGTGTTACCTTATTGTATTCATCTTCTCTTCATTTCATGGTTTCTTTCTGCTCATATG
TTGGCTATAGCACAAAGATCCACTTACATTGTCCATATGGACAAAACCTTAATGCCTAAT
GTCTTTCCAGATCACCATCATTGGCATTCTTCCACTATTGATTCCATCAAAGCTTCTGTT
CCTTCATCAGTAGACAGATTCCACTCTGCTCCAAAACTTGTTTACTCCTATGACAATGTG
CTTCATGGCTTCAGTGCTGTTTTGTCCCAAGATGAAGTAGCAGCTTTGAAGAATTTACCA
GGTTTCATTTCAGCTTACAAAGATAGAACCGTGGAACCTCATACTACCCACACATCTGAT
TTCCTCAAACTCAATCCATCATCTGGTCTATGGCAAGCTTCTGGATTAGGACAAGATGTG
ATTATTGGAGTTTTTGACTCTGGCATCTGGCCTGAATCCGTAAGTTTCCAAGATGATGGT
ATGCCTGAAATCCCGAAAAGGTGGAAGGGAATTTGCAAGCCAGGCACTCAGTTTAACACT
TCAATGTGCAACAAGAAACTCATTGGGGCTAATTACTTCAATCAGGGTATTTTGGCGAAT
GATCCCACAGTGAACATTTCGATGAATTCTGCTAGGGATACCGATGGTCATGGTACACAT
GTAGCTTCAATAGCTGCTGGGAACTTTGCCAAAGGTGTTTCCCATTTTGGATATGCACCA
GGGACAGCTAGAGGGGTTGCACCACGAGCTAGGCTAGCTGTTTACAAGTTTAGTTTCAAA
GAAGGTACCTTTACTTCAGATTTAATTGCAGCTATGGACCAAGCTGTTGCGGATGGTGTT
GACATGATGTCCATTTCATTTGGGTCCCGTTTTGTTCCCATGTATGAAGATGCTATATCC
ATTGCTTCTTTTGGAGCTATGATGAAGGGAGTTCTTGTTTCAGCTTCAGCTGGAAATCGA
GGCCCGGATACTGGAACTTTAAAGAACGGATCTCCATGGATCTTGTGTGTGGCATCAGGC
CACACTGACCGGACATTTGCAGGAACTTTGACACTGGGAAACGGCTTAAAAATTAGGGGG
TGGAGCTTGTTTCCTGCAAGAGTCATTGTTATGGATTCAACAGTGATTTACAACAAAACT
CTATCTAATTGCAATTCCGAGGAATTGCTATCACAAGTTCCTGATCCCGAACACACCATC
ATTATATGTGATGACAGCTGGGATTTTTCTGATCAAATGCGCACTGTCAGTCGAGCAAGA
CTTAAAGCAGCCATCTTTATTTCTGAGGATCCAGGAGTGTTCAGGTCTGCTTCATTTCCC
AATCCTGGAGTTGTGATTAACAAAACTGAAGGGAAACAAGTGATCAGTTATGTACAAAAT
AGCGTCGCTCCCACAGCCAGCATCACATTCCAAGAGACGTATCTAGATGCAAAGCCAGCA
CCAGTTGTTGCTGCATCCTCCGCACGAGGACCCTCCAGAAGCTATTTGGGAATTGCAAAG
CCAGATATATTGGCACCAGGGGTGCTGATTCTTGCAGCATATCCACCAAATGTATTTGCT
ACAAGTATTGGGACGAACATAGAATTATCCTCTGATTACATTCTTGAATCAGGCACATCG
ATGGCTGCACCACATGCTGCTGGAATCGCAGCAATGCTAAAAGCCGCGCATCCTGAGTGG
AGTCCTTCAGCTATTCGCTCTGCTATGATGACCACGGCAGATCCTTTGGATAACACTGGA
AAACCAATCATAGACTCTGACATTAACAGGGAAGCCACACCCCTAGCCATGGGATCAGGG
CATGTCAATCCCAACAGAGCCCTTGACCCCGGCCTAGTATATGATGCTACTCCACAAGAT
TACGTAAATCTCTTATGCTCTATGAATTTCACAGAAGAGCAATTCAAGACAATTGCAAGA
TCATCAGCCAATCACAACTGCTCAGATCCATCAGCTGATCTCAATTACCCTTCATTCATT
GCATTGTACAGCAATGAGGGAAACTACACCTGGTTGGAGCAGAAATTCAGGAGGACAGTC
ACAAATGTTGGTCAAGGTGCAGCTACTTATAAAGCTAAGATAAAAGCTCCCAAGAACTCA
AAAGTTTCAGTGTCACCACAAACTTTGGTGTATAAGAATAAAAATGAGAAGCAAAGTTAT
ACTTTGACAATTCGTTATATAGGTCCCAATTGGAACTATGGGTCGATCACTTGGGTTGAA
GAGCACGGAAATCATACTGTTAGGAGCCCTATAGTGATATCTCCCATAATTGATCTCTGG
TAA