Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017631
CDS Infomation

pacid=37436121 polypeptide=PGSC0003DMP400012118 locus=PGSC0003DMG400006838 ID=PGSC0003DMT400017631.v4.03 annot-version=v4.03
Sequence

ATGGGGTTTCCTTATTCTCTTCATCTTCTCTTCCTTTCATGGTTTATTTCTGTTCATTTG
TTCTGTTACTTAGCTATAGCACAAAGATCCACTTATATTGTCCATTTGGACAAATCTTTA
ATGCCTAATGTCTTTCCAGATCACCATCATTGGCATTCTTCCACTATTGATTCCATCAAA
GCTTCTGTTCCTTCATCAGTAGACAGGTTCCATTCTGCTCCAAAACTTGTTTACTCCTAT
GACAATGTGTTTCATGGCTTCAGTGCTGTTTTGTCCAAAGATGAACTGAAAGCTTTGAAA
AAGTTACCAGGTTTTGTTTCAGCATATAAAGATAGAACTGTGGAACCTCACACTACCTAC
ACATCTGATTTCCTCAAGCTCAATCCGTCATCTGGGCTATGGCCAGCTTCTGGTTTAGGC
CAAGATGTGATCATTGGTGTTCTTGACGGTGGAATCTGGCCGGAATCTGCAAGTTTCCGA
GATGATGGTATTCCTGAAATCCCCAAAAGGTGGAAAGGAATTTGCAAGCCTGGAACAGAG
TTTAACACTTCTATGTGCAACAAGAAACTCATTGGGGCTAATTACTTCAATAAAGGAATT
TTGGCTAATGATCCCAATGTCAACATTTCCATGAACTCTGCCAGGGATACTGATGGTCAT
GGCTCACATTGCGCTTCCATTGCTGCTGGGAACTTTGCGAAAGGTGTTTCCCATTTTGGA
TATGCAGCAGGAACGGCAAGAGGGGCTGCTCCACGAGCTAGGCTAGCTGTGTATAAGTTC
AGCTTTGATGAAGGAACTTTTACATCAGATTTAGTTGCTGCTATGGACCAAGCTGTTGCG
GATGGCGTTGATGTGATATCCATTTCATTTGGATTCCGGTTCATTCCCTTGTATGAAGAT
GCTATATCAATTGCTTCTTTTGGAGCTATGATGAAGGGGGTATTGGTTTCGGCTTCAGCT
GGAAATCGAGGTCCAAGTTGGGGGAGTTTAGGCAATGGATCTCCATGGATATTGTGCGTG
GCATCAGGCTACACCGACCGGACATTTGCAGGAACTTTGACTTTGGGCAATGGATTAAAA
ATTAGGGGGTGGAGCTTGTTTCCTGCAAGAGCCTTTGTCAGGGATTCTCTGGTGATTTAC
AACAAGACTCTAGCCACTTGCAGGTCAGATGAGTTGCTATCGCAAGTTCCTGATCCCGAA
AGCACCATTATCATCTGTGATTATAATGCGGATGAAGATGGTTTTGGTTTCAGTAGTCAA
ATTTCTCACGTCGAAGAAGCAAGATTTAAAGCAGGCATCTTTATTTCTGAGGATCCAGGA
GTGTTCAGAGATGCTTCTTTTTCCCACCCGGGAGTTGTGATTGACAAAAAGGAAGGGAAA
AAAGTCATCAATTACGTTAAAAACAGTGTTGCTCCCACGGCCACCATAACATTCCAAGAA
ACGTATGTGGATGGAGAAAGGCCAGCCCCAATTCTTGCTGGATCCTCATCACGAGGGCCC
TCCAGAAGCTACTTGGGAATTGCAAAGCCAGATATTATGGCACCAGGGGTACTGATTCTT
GCAGCGGTTCCACCCAATCTATTTTCACAAAGTATTCAGAACATAGCATTAGCCACTGAT
TACGAGGTTAAATCAGGCACATCAATGGCTGCTCCTCATGCGGCTGGAATTGCAGCAATG
CTAAAAGGCGCACATCCTGAATGGAGTCCTTCAGCTATTCGCTCTGCCATGATGACTACT
GCAAACCATTTGAATAGTGCTCAAAAGCCTATTAGAGAGGATGATAACTTTGTAGCCACG
CCCCTAGACATGGGAGCAGGGCATGTTGACCCGAACAAAGCTCTTGATCCCGGCCTAGTA
TATGATGCTACTCCACAAGATTATATAAATCTTATATGCTCTATGAATTTCACCGAAGAG
CAGTTCAAAACATTTGCAAGATCATCAGCCAATTACGACAACTGCTCAAATCCATCAGCT
GATCTCAATTACCCATCATTCATTGCCTTGTACCCATTCAGTCTCGAGGGGAACTTCACC
TGGTTGGAGCAGAAATTCAGGAGGACTCTAACAAATGCTGGTAAAGGTCGAGCAACTTAT
AAAGTAAAGATAGAAACTCCCAAAAATTCCACAGTTTCGGTGTCACCGCGAACTCTGGTG
TTCAAGGAGAAGAATGATAAACAAAGCTATACTTTGTCAATTCGCTATATAGGTGACAGT
GATCAGAGTAGGAACGTCGGGTCAATCACTTGGGTTGAAGAAAATGGTAATCACTCAGTT
AGGAGTCCTATAGTGATATCTAGGATTATTGATGTTTGGGGTAGTGATGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012118
PEP Infomation

pacid=37436121 transcript=PGSC0003DMT400017631 locus=PGSC0003DMG400006838 ID=PGSC0003DMT400017631.v4.03 annot-version=v4.03
Sequence

MGFPYSLHLLFLSWFISVHLFCYLAIAQRSTYIVHLDKSLMPNVFPDHHHWHSSTIDSIK
ASVPSSVDRFHSAPKLVYSYDNVFHGFSAVLSKDELKALKKLPGFVSAYKDRTVEPHTTY
TSDFLKLNPSSGLWPASGLGQDVIIGVLDGGIWPESASFRDDGIPEIPKRWKGICKPGTE
FNTSMCNKKLIGANYFNKGILANDPNVNISMNSARDTDGHGSHCASIAAGNFAKGVSHFG
YAAGTARGAAPRARLAVYKFSFDEGTFTSDLVAAMDQAVADGVDVISISFGFRFIPLYED
AISIASFGAMMKGVLVSASAGNRGPSWGSLGNGSPWILCVASGYTDRTFAGTLTLGNGLK
IRGWSLFPARAFVRDSLVIYNKTLATCRSDELLSQVPDPESTIIICDYNADEDGFGFSSQ
ISHVEEARFKAGIFISEDPGVFRDASFSHPGVVIDKKEGKKVINYVKNSVAPTATITFQE
TYVDGERPAPILAGSSSRGPSRSYLGIAKPDIMAPGVLILAAVPPNLFSQSIQNIALATD
YEVKSGTSMAAPHAAGIAAMLKGAHPEWSPSAIRSAMMTTANHLNSAQKPIREDDNFVAT
PLDMGAGHVDPNKALDPGLVYDATPQDYINLICSMNFTEEQFKTFARSSANYDNCSNPSA
DLNYPSFIALYPFSLEGNFTWLEQKFRRTLTNAGKGRATYKVKIETPKNSTVSVSPRTLV
FKEKNDKQSYTLSIRYIGDSDQSRNVGSITWVEENGNHSVRSPIVISRIIDVWGSDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400017631
Transcript Infomation

pacid=37436121 locus=PGSC0003DMG400006838 ID=PGSC0003DMT400017631.v4.03 annot-version=v4.03
Sequence

ATGGGGTTTCCTTATTCTCTTCATCTTCTCTTCCTTTCATGGTTTATTTCTGTTCATTTG
TTCTGTTACTTAGCTATAGCACAAAGATCCACTTATATTGTCCATTTGGACAAATCTTTA
ATGCCTAATGTCTTTCCAGATCACCATCATTGGCATTCTTCCACTATTGATTCCATCAAA
GCTTCTGTTCCTTCATCAGTAGACAGGTTCCATTCTGCTCCAAAACTTGTTTACTCCTAT
GACAATGTGTTTCATGGCTTCAGTGCTGTTTTGTCCAAAGATGAACTGAAAGCTTTGAAA
AAGTTACCAGGTTTTGTTTCAGCATATAAAGATAGAACTGTGGAACCTCACACTACCTAC
ACATCTGATTTCCTCAAGCTCAATCCGTCATCTGGGCTATGGCCAGCTTCTGGTTTAGGC
CAAGATGTGATCATTGGTGTTCTTGACGGTGGAATCTGGCCGGAATCTGCAAGTTTCCGA
GATGATGGTATTCCTGAAATCCCCAAAAGGTGGAAAGGAATTTGCAAGCCTGGAACAGAG
TTTAACACTTCTATGTGCAACAAGAAACTCATTGGGGCTAATTACTTCAATAAAGGAATT
TTGGCTAATGATCCCAATGTCAACATTTCCATGAACTCTGCCAGGGATACTGATGGTCAT
GGCTCACATTGCGCTTCCATTGCTGCTGGGAACTTTGCGAAAGGTGTTTCCCATTTTGGA
TATGCAGCAGGAACGGCAAGAGGGGCTGCTCCACGAGCTAGGCTAGCTGTGTATAAGTTC
AGCTTTGATGAAGGAACTTTTACATCAGATTTAGTTGCTGCTATGGACCAAGCTGTTGCG
GATGGCGTTGATGTGATATCCATTTCATTTGGATTCCGGTTCATTCCCTTGTATGAAGAT
GCTATATCAATTGCTTCTTTTGGAGCTATGATGAAGGGGGTATTGGTTTCGGCTTCAGCT
GGAAATCGAGGTCCAAGTTGGGGGAGTTTAGGCAATGGATCTCCATGGATATTGTGCGTG
GCATCAGGCTACACCGACCGGACATTTGCAGGAACTTTGACTTTGGGCAATGGATTAAAA
ATTAGGGGGTGGAGCTTGTTTCCTGCAAGAGCCTTTGTCAGGGATTCTCTGGTGATTTAC
AACAAGACTCTAGCCACTTGCAGGTCAGATGAGTTGCTATCGCAAGTTCCTGATCCCGAA
AGCACCATTATCATCTGTGATTATAATGCGGATGAAGATGGTTTTGGTTTCAGTAGTCAA
ATTTCTCACGTCGAAGAAGCAAGATTTAAAGCAGGCATCTTTATTTCTGAGGATCCAGGA
GTGTTCAGAGATGCTTCTTTTTCCCACCCGGGAGTTGTGATTGACAAAAAGGAAGGGAAA
AAAGTCATCAATTACGTTAAAAACAGTGTTGCTCCCACGGCCACCATAACATTCCAAGAA
ACGTATGTGGATGGAGAAAGGCCAGCCCCAATTCTTGCTGGATCCTCATCACGAGGGCCC
TCCAGAAGCTACTTGGGAATTGCAAAGCCAGATATTATGGCACCAGGGGTACTGATTCTT
GCAGCGGTTCCACCCAATCTATTTTCACAAAGTATTCAGAACATAGCATTAGCCACTGAT
TACGAGGTTAAATCAGGCACATCAATGGCTGCTCCTCATGCGGCTGGAATTGCAGCAATG
CTAAAAGGCGCACATCCTGAATGGAGTCCTTCAGCTATTCGCTCTGCCATGATGACTACT
GCAAACCATTTGAATAGTGCTCAAAAGCCTATTAGAGAGGATGATAACTTTGTAGCCACG
CCCCTAGACATGGGAGCAGGGCATGTTGACCCGAACAAAGCTCTTGATCCCGGCCTAGTA
TATGATGCTACTCCACAAGATTATATAAATCTTATATGCTCTATGAATTTCACCGAAGAG
CAGTTCAAAACATTTGCAAGATCATCAGCCAATTACGACAACTGCTCAAATCCATCAGCT
GATCTCAATTACCCATCATTCATTGCCTTGTACCCATTCAGTCTCGAGGGGAACTTCACC
TGGTTGGAGCAGAAATTCAGGAGGACTCTAACAAATGCTGGTAAAGGTCGAGCAACTTAT
AAAGTAAAGATAGAAACTCCCAAAAATTCCACAGTTTCGGTGTCACCGCGAACTCTGGTG
TTCAAGGAGAAGAATGATAAACAAAGCTATACTTTGTCAATTCGCTATATAGGTGACAGT
GATCAGAGTAGGAACGTCGGGTCAATCACTTGGGTTGAAGAAAATGGTAATCACTCAGTT
AGGAGTCCTATAGTGATATCTAGGATTATTGATGTTTGGGGTAGTGATGACTAG