Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017609
CDS Infomation

pacid=37437406 polypeptide=PGSC0003DMP400012105 locus=PGSC0003DMG400006829 ID=PGSC0003DMT400017609.v4.03 annot-version=v4.03
Sequence

ATGCAGCCCTATGGAATTCAATCAATGCTGAAAGAAGGGCACAAGCATCTTTCCGGTCTC
GATGAAGCTGTCCTAAAAAACATCGATGCTTGTAAACAGCTCTCCGCCATTACTCGAACT
TCTCTTGGCCCCAATGGCATGAATAAGATGGTTATCAATCATCTGGACAAGCTTTTTGTC
ACAAATGATGCTGCCACTATTGTGAATGAGCTTGAGGTCCAGCACCCTGCTGCAAAAATA
TTGGTTTTGGCCGGAAAGGCACAGCAAGAGGAAATTGGTGATGGAGCTAATTTGACTGTT
TCATTTGCGGGGGAGCTCCTCCAAAATGCTGAGGAGCTCATCAGGATGGGGTTGCACCCT
AGTGAGATTATTATCGGATACAATAAGGCAATAAATAAGACAATTGAATTATTGGATGAG
CTAGTTGAGGAAGGTTCCGAAAATATGAATGTCAAAGACAAGAATGAAGTTATTTCAAGG
ATGAAATCTGCAGTTGCTAGCAAACAATTTGGACTAGAGGATGTCCTGTGTCCCCTTGTC
GCTGAGGCTTGCATTCAAGTGTGCCCTAAAAACCCAGCGAACTTCAATGTCGATAATGTA
CGAGTCGCAAAGCTCTTGGGTGGGGGTTTGCTTAATTCCACCATAGTTAGAGGTATGGTG
TTGAAAAGTGATGCTGTTGGGAGCATAAAGAGGATAGAGAAGGCAAAGGTTGCTGTTTTT
GTTCAAGGTGTTGATACATCTGCGACTGAAACAAAAGGAACAGTTCTTATTCATAGTGCT
GAGCAGCTTGAAAACTATGCAAAGACTGAAGAGGCTAAGGTGGAGGAACTTATTAAATCA
GTTGCTGACTCAGGTGCCAAGGTCATTGTCAGTGGAGCAGCGGTGGGAGAGATGGCTCTA
CATTTCTGTGAGCGTTACAAACTTATGGTATTGAAAATCAGCTCCAAGTTTGAACTCCGC
CGTTTTTGCCGTACCACTGGGGCTGTTGCACTTTTAAAGCTTAGCCAGCCAAATCCAGAT
GACCTTGGCCATGTTGATTCTGTTTCAGTGGAGGAAATTGGTGGTGTCAGGGTTACAGTT
GTGAGAAATGAAGACGGTGGAAATTCTGTCTCCACTGTTGTTTTGCGGGGAAGCACTGAT
AGTATCTTGGATGACCTTGAAAGAGCCATTGATGATGGTGTAAATACCTACAAGGCAATG
TGCAGGGACAGTCGGATCGTACCTGGAGCTGCAGCTACTGAAATTGAGCTGGCCAGAAAG
TTGAAAGAATTCTCTTTCAAAGAGATGGGGTTGGATCAATATGCAATAGCAAAATTTGCT
GAAAGTTTTGAAATGGTTCCTAAAACGCTAGCTGAGAATGCTGGCCTCAATGCGATGGAG
ATCATATCAACCTTGTATGCTGAACATGCATCTGGAAATGTCAAAGTGGGCCTTAACTTG
GAGAAAGGTGCCTGTGAGGATATCTCTGGCTTGAGTATATGGGACCTCTATGTTACCAAA
TTTTTTGCTCTAAAATATGCCGCTGATGCTGTCTGCACTGTGCTTCGGGTAGACCAGATT
ATAATGTCAAAACCAGCGGGAGGTCCAGGCAAGAGAGAACAACCTGCAGGGATGGACGAG
GATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012105
PEP Infomation

pacid=37437406 transcript=PGSC0003DMT400017609 locus=PGSC0003DMG400006829 ID=PGSC0003DMT400017609.v4.03 annot-version=v4.03
Sequence

MQPYGIQSMLKEGHKHLSGLDEAVLKNIDACKQLSAITRTSLGPNGMNKMVINHLDKLFV
TNDAATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTVSFAGELLQNAEELIRMGLHP
SEIIIGYNKAINKTIELLDELVEEGSENMNVKDKNEVISRMKSAVASKQFGLEDVLCPLV
AEACIQVCPKNPANFNVDNVRVAKLLGGGLLNSTIVRGMVLKSDAVGSIKRIEKAKVAVF
VQGVDTSATETKGTVLIHSAEQLENYAKTEEAKVEELIKSVADSGAKVIVSGAAVGEMAL
HFCERYKLMVLKISSKFELRRFCRTTGAVALLKLSQPNPDDLGHVDSVSVEEIGGVRVTV
VRNEDGGNSVSTVVLRGSTDSILDDLERAIDDGVNTYKAMCRDSRIVPGAAATEIELARK
LKEFSFKEMGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISTLYAEHASGNVKVGLNL
EKGACEDISGLSIWDLYVTKFFALKYAADAVCTVLRVDQIIMSKPAGGPGKREQPAGMDE
D*

Transcript Sequence

Transcript ID

PGSC0003DMT400017609
Transcript Infomation

pacid=37437406 locus=PGSC0003DMG400006829 ID=PGSC0003DMT400017609.v4.03 annot-version=v4.03
Sequence

ATGCAGCCCTATGGAATTCAATCAATGCTGAAAGAAGGGCACAAGCATCTTTCCGGTCTC
GATGAAGCTGTCCTAAAAAACATCGATGCTTGTAAACAGCTCTCCGCCATTACTCGAACT
TCTCTTGGCCCCAATGGCATGAATAAGATGGTTATCAATCATCTGGACAAGCTTTTTGTC
ACAAATGATGCTGCCACTATTGTGAATGAGCTTGAGGTCCAGCACCCTGCTGCAAAAATA
TTGGTTTTGGCCGGAAAGGCACAGCAAGAGGAAATTGGTGATGGAGCTAATTTGACTGTT
TCATTTGCGGGGGAGCTCCTCCAAAATGCTGAGGAGCTCATCAGGATGGGGTTGCACCCT
AGTGAGATTATTATCGGATACAATAAGGCAATAAATAAGACAATTGAATTATTGGATGAG
CTAGTTGAGGAAGGTTCCGAAAATATGAATGTCAAAGACAAGAATGAAGTTATTTCAAGG
ATGAAATCTGCAGTTGCTAGCAAACAATTTGGACTAGAGGATGTCCTGTGTCCCCTTGTC
GCTGAGGCTTGCATTCAAGTGTGCCCTAAAAACCCAGCGAACTTCAATGTCGATAATGTA
CGAGTCGCAAAGCTCTTGGGTGGGGGTTTGCTTAATTCCACCATAGTTAGAGGTATGGTG
TTGAAAAGTGATGCTGTTGGGAGCATAAAGAGGATAGAGAAGGCAAAGGTTGCTGTTTTT
GTTCAAGGTGTTGATACATCTGCGACTGAAACAAAAGGAACAGTTCTTATTCATAGTGCT
GAGCAGCTTGAAAACTATGCAAAGACTGAAGAGGCTAAGGTGGAGGAACTTATTAAATCA
GTTGCTGACTCAGGTGCCAAGGTCATTGTCAGTGGAGCAGCGGTGGGAGAGATGGCTCTA
CATTTCTGTGAGCGTTACAAACTTATGGTATTGAAAATCAGCTCCAAGTTTGAACTCCGC
CGTTTTTGCCGTACCACTGGGGCTGTTGCACTTTTAAAGCTTAGCCAGCCAAATCCAGAT
GACCTTGGCCATGTTGATTCTGTTTCAGTGGAGGAAATTGGTGGTGTCAGGGTTACAGTT
GTGAGAAATGAAGACGGTGGAAATTCTGTCTCCACTGTTGTTTTGCGGGGAAGCACTGAT
AGTATCTTGGATGACCTTGAAAGAGCCATTGATGATGGTGTAAATACCTACAAGGCAATG
TGCAGGGACAGTCGGATCGTACCTGGAGCTGCAGCTACTGAAATTGAGCTGGCCAGAAAG
TTGAAAGAATTCTCTTTCAAAGAGATGGGGTTGGATCAATATGCAATAGCAAAATTTGCT
GAAAGTTTTGAAATGGTTCCTAAAACGCTAGCTGAGAATGCTGGCCTCAATGCGATGGAG
ATCATATCAACCTTGTATGCTGAACATGCATCTGGAAATGTCAAAGTGGGCCTTAACTTG
GAGAAAGGTGCCTGTGAGGATATCTCTGGCTTGAGTATATGGGACCTCTATGTTACCAAA
TTTTTTGCTCTAAAATATGCCGCTGATGCTGTCTGCACTGTGCTTCGGGTAGACCAGATT
ATAATGTCAAAACCAGCGGGAGGTCCAGGCAAGAGAGAACAACCTGCAGGGATGGACGAG
GATTAA