Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017608
CDS Infomation

pacid=37441667 polypeptide=PGSC0003DMP400012104 locus=PGSC0003DMG400006828 ID=PGSC0003DMT400017608.v4.03 annot-version=v4.03
Sequence

ATGGATGCATATGAAGCTACAAAAATTGTTTTCCAAAGGATTCAAAGTTTGGATCCTGAA
AATGCCTCAAAAATTATGGGGATTCTTCTGATACAAGACCATGGTGAGAAAGAAATGATT
AGATTGGCTTTTGGTCCAGAAGCTTTAGTTCACTCAGTGATTCTTAAAGCAAGAAAAGAA
CTTGGTGTTTCTTCAAACTCACCTTCTACACCTTCAACTCCTTCTTCACCTTCACCTTTT
GGTGGTTCAGTGTGTTTTTCGAGGCAGAATTCTTCTTCTTCAGCTACTTCTGGTAGGATT
CTTGGTGGTTTAAACCTTCCTTCACCTCTTAGCATAACTAGTAACAACAACCACTCTTCA
ACTGTTTCTGCTTCTTGGAGTACTAGTCCTAGTTTCTCTGAGTTCCAAGAAGCTGATCTA
GTTAGTCCTAGTGCTTCCAACATCTCATATACTGCTGCTAGTACTAATGGAATGAACAAT
TCCACCATGAATTCCTCTGCTCCTCCCTTTTATTGCAATGGAGAAGTAGACTTGATAGAT
GAGTTTCAACTACAGGACCAGCTTTCTTTCTTGAATGATGGGTCACCAACCTTGGGGCCT
AAGAATCCTGATGTTTATTACCAACAGCAGCAGCAACAGCAACAGCAAGATTTAGCCTCA
AGTCCAAGTGGGGATTCCATGCTTTTCTCTTCATATAACTGGGGTGGTGGTGGCTGCAGC
TCAGTCAACGGGCTCTCTCATAGAAGGAGCTGCTCTGTGAGTGATATATGTTTGGGGGCT
GATGACCCAAGTGGAGGACTTGGCTGGAAACCTTGTCTCTATTTTGCTAGAGGGTATTGC
AAGAATGGAAGTAGCTGTAGGTTCCTTCATGGTGCTGGGCCTGGTGAGGGCGAGGTTGGG
TCACCAAGCAAGTTTGAGATGATGGAACATTGCCAAGAACTTCTCAGATCTAAGTCAGCT
CACCAGCAAAGACTAGCCACAGCTTCTCAGCTCATGGCTTCTTCTAACTTCCCTCTCTCT
CCCATGGCTGCTAACAAATGCATCAACTTTCTTCAGCAGCAACAGTTGCAGTCTGCTGAG
AGTCCCAGAGCAGCTGCAGCATTGATGATGGGTGATGACATGCATAAGTTGAGCAGAAGT
CGTTTTGAAAGAGGGGATTTTGGACTGAATGGTGGAGCTGGAATAGCAAATCCAGGTTCA
AGGCAAATTTACTTGACATTTCCTGCTGATAGTACTTTCAAAGAAGAGGATGTTTCCAAT
TATTTCAGCACTTATGGGCCTGTTCAAGATGTGAGGATTCCATATCAGCAAAAGAGGATG
TTTGGTTTTGTTACATTTGTTTATCCAGAGACTGTGAAGACCATTCTTGCCAAAGGAAAT
CCTCATTTTGTATGTGATGCTAGGGTGCTTGTCAAGCCTTACAAAGAGAAGGGCAAAGTC
CCAGAGAAGTTTAGGAAACAACACCAACAGCAGATGGAGAGGGGAGAATTCACTGGATGT
GGTAGTCCTACTGGTCTTGAGTCCAGTGATCCTTATGATCTTCAGCTTGGTGCAAGAATG
TTTTACAATACTCAAGATGCATTGTGGAGGAGAAAATTGGAAGAACAAGCTGATCTGCAA
CAGGCAATTGAGCTCCAAAGCAGGAGATTACTGAATTTACAGCTTCTTGATGTCAAAAGG
AGCAACCATCATCGCGCCCTTTCCATGAGTGCTGTTATCCCATCCCCACCTCACTCTCCA
GGCTTCTTCAATCAAAATATGGTTCGCTCCACAGACTTTGGCATCCTAGAAGAGAATGGT
TTTGCACCAAAAATGGCCAATTTTACTGCTTTTACTGCTGCTGAGCAAAAGAATGGAAAT
CTCACTGCCAAGGAGAGAGAATGCTTCACAGGTAAAGATGAAAATAGCAATGGCAAAGAA
AGTTCCAAGAAGGAAGCAAGTGATTTTCAAGAAAGCAGTTTGGAGCATAATCTCCCAGAT
AGTCCATTTGCATCACCTAAAGCAGTTGGAGACTTTATCACAACTTTCTCAAATGAAGCT
GCTGGAGATGTTGACAAAGGTGCTGGATTAAATGCATCATCCTCTGCTAACAATAATATG
ATCCCTTCTTCCTCCTTGTTACCTGCTACTAGTACTCTAGACATGACTCCTTTCAAATCA
TGTTACTTCCAAGTGCCTAGGTTCCCTTCCGGACATGGCACCATTGGAATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012104
PEP Infomation

pacid=37441667 transcript=PGSC0003DMT400017608 locus=PGSC0003DMG400006828 ID=PGSC0003DMT400017608.v4.03 annot-version=v4.03
Sequence

MDAYEATKIVFQRIQSLDPENASKIMGILLIQDHGEKEMIRLAFGPEALVHSVILKARKE
LGVSSNSPSTPSTPSSPSPFGGSVCFSRQNSSSSATSGRILGGLNLPSPLSITSNNNHSS
TVSASWSTSPSFSEFQEADLVSPSASNISYTAASTNGMNNSTMNSSAPPFYCNGEVDLID
EFQLQDQLSFLNDGSPTLGPKNPDVYYQQQQQQQQQDLASSPSGDSMLFSSYNWGGGGCS
SVNGLSHRRSCSVSDICLGADDPSGGLGWKPCLYFARGYCKNGSSCRFLHGAGPGEGEVG
SPSKFEMMEHCQELLRSKSAHQQRLATASQLMASSNFPLSPMAANKCINFLQQQQLQSAE
SPRAAAALMMGDDMHKLSRSRFERGDFGLNGGAGIANPGSRQIYLTFPADSTFKEEDVSN
YFSTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHFVCDARVLVKPYKEKGKV
PEKFRKQHQQQMERGEFTGCGSPTGLESSDPYDLQLGARMFYNTQDALWRRKLEEQADLQ
QAIELQSRRLLNLQLLDVKRSNHHRALSMSAVIPSPPHSPGFFNQNMVRSTDFGILEENG
FAPKMANFTAFTAAEQKNGNLTAKERECFTGKDENSNGKESSKKEASDFQESSLEHNLPD
SPFASPKAVGDFITTFSNEAAGDVDKGAGLNASSSANNNMIPSSSLLPATSTLDMTPFKS
CYFQVPRFPSGHGTIGM*

Transcript Sequence

Transcript ID

PGSC0003DMT400017608
Transcript Infomation

pacid=37441667 locus=PGSC0003DMG400006828 ID=PGSC0003DMT400017608.v4.03 annot-version=v4.03
Sequence

ATGGATGCATATGAAGCTACAAAAATTGTTTTCCAAAGGATTCAAAGTTTGGATCCTGAA
AATGCCTCAAAAATTATGGGGATTCTTCTGATACAAGACCATGGTGAGAAAGAAATGATT
AGATTGGCTTTTGGTCCAGAAGCTTTAGTTCACTCAGTGATTCTTAAAGCAAGAAAAGAA
CTTGGTGTTTCTTCAAACTCACCTTCTACACCTTCAACTCCTTCTTCACCTTCACCTTTT
GGTGGTTCAGTGTGTTTTTCGAGGCAGAATTCTTCTTCTTCAGCTACTTCTGGTAGGATT
CTTGGTGGTTTAAACCTTCCTTCACCTCTTAGCATAACTAGTAACAACAACCACTCTTCA
ACTGTTTCTGCTTCTTGGAGTACTAGTCCTAGTTTCTCTGAGTTCCAAGAAGCTGATCTA
GTTAGTCCTAGTGCTTCCAACATCTCATATACTGCTGCTAGTACTAATGGAATGAACAAT
TCCACCATGAATTCCTCTGCTCCTCCCTTTTATTGCAATGGAGAAGTAGACTTGATAGAT
GAGTTTCAACTACAGGACCAGCTTTCTTTCTTGAATGATGGGTCACCAACCTTGGGGCCT
AAGAATCCTGATGTTTATTACCAACAGCAGCAGCAACAGCAACAGCAAGATTTAGCCTCA
AGTCCAAGTGGGGATTCCATGCTTTTCTCTTCATATAACTGGGGTGGTGGTGGCTGCAGC
TCAGTCAACGGGCTCTCTCATAGAAGGAGCTGCTCTGTGAGTGATATATGTTTGGGGGCT
GATGACCCAAGTGGAGGACTTGGCTGGAAACCTTGTCTCTATTTTGCTAGAGGGTATTGC
AAGAATGGAAGTAGCTGTAGGTTCCTTCATGGTGCTGGGCCTGGTGAGGGCGAGGTTGGG
TCACCAAGCAAGTTTGAGATGATGGAACATTGCCAAGAACTTCTCAGATCTAAGTCAGCT
CACCAGCAAAGACTAGCCACAGCTTCTCAGCTCATGGCTTCTTCTAACTTCCCTCTCTCT
CCCATGGCTGCTAACAAATGCATCAACTTTCTTCAGCAGCAACAGTTGCAGTCTGCTGAG
AGTCCCAGAGCAGCTGCAGCATTGATGATGGGTGATGACATGCATAAGTTGAGCAGAAGT
CGTTTTGAAAGAGGGGATTTTGGACTGAATGGTGGAGCTGGAATAGCAAATCCAGGTTCA
AGGCAAATTTACTTGACATTTCCTGCTGATAGTACTTTCAAAGAAGAGGATGTTTCCAAT
TATTTCAGCACTTATGGGCCTGTTCAAGATGTGAGGATTCCATATCAGCAAAAGAGGATG
TTTGGTTTTGTTACATTTGTTTATCCAGAGACTGTGAAGACCATTCTTGCCAAAGGAAAT
CCTCATTTTGTATGTGATGCTAGGGTGCTTGTCAAGCCTTACAAAGAGAAGGGCAAAGTC
CCAGAGAAGTTTAGGAAACAACACCAACAGCAGATGGAGAGGGGAGAATTCACTGGATGT
GGTAGTCCTACTGGTCTTGAGTCCAGTGATCCTTATGATCTTCAGCTTGGTGCAAGAATG
TTTTACAATACTCAAGATGCATTGTGGAGGAGAAAATTGGAAGAACAAGCTGATCTGCAA
CAGGCAATTGAGCTCCAAAGCAGGAGATTACTGAATTTACAGCTTCTTGATGTCAAAAGG
AGCAACCATCATCGCGCCCTTTCCATGAGTGCTGTTATCCCATCCCCACCTCACTCTCCA
GGCTTCTTCAATCAAAATATGGTTCGCTCCACAGACTTTGGCATCCTAGAAGAGAATGGT
TTTGCACCAAAAATGGCCAATTTTACTGCTTTTACTGCTGCTGAGCAAAAGAATGGAAAT
CTCACTGCCAAGGAGAGAGAATGCTTCACAGGTAAAGATGAAAATAGCAATGGCAAAGAA
AGTTCCAAGAAGGAAGCAAGTGATTTTCAAGAAAGCAGTTTGGAGCATAATCTCCCAGAT
AGTCCATTTGCATCACCTAAAGCAGTTGGAGACTTTATCACAACTTTCTCAAATGAAGCT
GCTGGAGATGTTGACAAAGGTGCTGGATTAAATGCATCATCCTCTGCTAACAATAATATG
ATCCCTTCTTCCTCCTTGTTACCTGCTACTAGTACTCTAGACATGACTCCTTTCAAATCA
TGTTACTTCCAAGTGCCTAGGTTCCCTTCCGGACATGGCACCATTGGAATGTAG