Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017589
CDS Infomation

pacid=37438494 polypeptide=PGSC0003DMP400012086 locus=PGSC0003DMG400006824 ID=PGSC0003DMT400017589.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGAAGAAGAGCTGGTTCAACTTGCTCAAGACATTTTTCGTTTCAGGATCAGAA
TCAAGATTAGACAAGGGGAAAAGGAAAGGATGGGTATTTACAAGGCTAAAGATCAGAAGG
TTGGTGGCGACCTCCGCGTTGTCACCACCAAGGGAAAGGAGACACCAGAAAGCAGAAGAG
AAGCATAACAAGCATGCTATAAAGGTAGATGTTGAAACAATTAATGAATCGAATGCAGAT
GCTGAAACTCCAATAGTTGAAGCTGAAATCGCTACCTTTAAAGAAGGCACTGAGTCTATC
TGCCACAGGCCGAAAAATGAAACTCTTGTATTGTCAAAAATGACTATTCATGGCCAAGAA
ACAAAGTACTTTTACCTCTATGAGAGAAGGATTGAAAATCTTGCTGCCATCAAAATTCAG
ACAGCATTTCGCAGCTATCTTGCAAGGAAAGCTTTGAGAGCACTAAAGGGACTAGTGAGG
CTTCAAGCTATTGTTCGTGGTAGGGCTGTTCGACGTCAGGCTATTGCTACACTTAGGTCC
TTGCAGTCAATTGTAAACATTCAATCGGAAGTATGTGCAAAGAGATGTGATAATCAGGTG
AAAACTACAGTACATTGTCAAGAAAATACGTTGCTGGATCTCGGAGAGAAAGATATCAAG
ATTGATCTGAACAGCCAGAAAAGGTGGGACAATCGGTATTTATCTAAGGAAGAAGCAAAC
AAGATGTTCTCAAGCAAAAGGGAGGCTGCGATCAAGAGAGAACGTATAAGAGAATACTGG
TTAAGCCATCGAAGGTCAACAGAATCAGACGTAAATGGAAGAAGGCGATACTGGTTAGAA
CAATGGGTAGATGCTCAGCTGGCTAAAAGAGATGACCTTAAGAACGTGGACACGCTTTTC
TCCGCAAGAAACAGAGAAGAATTCGAGAGAAAAGAAATGAAACCAAAGTCTTCTCTAAGA
CAATACCATACAGATCAAGAATTGGTTTCACCAGTATATGTTCCAAGAAGATCATTTCAC
CACAGAAGACAGAAATCAAGTGGGGATCATGACAATACTTTCATGGGCTCTCCTTCGATT
CCAACTTACATGGCAGCCACGGAATCTGCAAAAGCAAAAGCAAGGTCAATGAGTTCACCA
AGGCTAAGACCAATCAATACTGATGTCTACTCTGAGATAAATTCTCCCCTACAAGTACAA
ACTATCTCCCCATATCTTCTATCAACAGCGATGCCACGGTCACAAGTAGGATTGGAAGTG
TTCCTGGCTTCTCACAAAGATCACCATGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012086
PEP Infomation

pacid=37438494 transcript=PGSC0003DMT400017589 locus=PGSC0003DMG400006824 ID=PGSC0003DMT400017589.v4.03 annot-version=v4.03
Sequence

MAKKKSWFNLLKTFFVSGSESRLDKGKRKGWVFTRLKIRRLVATSALSPPRERRHQKAEE
KHNKHAIKVDVETINESNADAETPIVEAEIATFKEGTESICHRPKNETLVLSKMTIHGQE
TKYFYLYERRIENLAAIKIQTAFRSYLARKALRALKGLVRLQAIVRGRAVRRQAIATLRS
LQSIVNIQSEVCAKRCDNQVKTTVHCQENTLLDLGEKDIKIDLNSQKRWDNRYLSKEEAN
KMFSSKREAAIKRERIREYWLSHRRSTESDVNGRRRYWLEQWVDAQLAKRDDLKNVDTLF
SARNREEFERKEMKPKSSLRQYHTDQELVSPVYVPRRSFHHRRQKSSGDHDNTFMGSPSI
PTYMAATESAKAKARSMSSPRLRPINTDVYSEINSPLQVQTISPYLLSTAMPRSQVGLEV
FLASHKDHHA*

Transcript Sequence

Transcript ID

PGSC0003DMT400017589
Transcript Infomation

pacid=37438494 locus=PGSC0003DMG400006824 ID=PGSC0003DMT400017589.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGAAGAAGAGCTGGTTCAACTTGCTCAAGACATTTTTCGTTTCAGGATCAGAA
TCAAGATTAGACAAGGGGAAAAGGAAAGGATGGGTATTTACAAGGCTAAAGATCAGAAGG
TTGGTGGCGACCTCCGCGTTGTCACCACCAAGGGAAAGGAGACACCAGAAAGCAGAAGAG
AAGCATAACAAGCATGCTATAAAGGTAGATGTTGAAACAATTAATGAATCGAATGCAGAT
GCTGAAACTCCAATAGTTGAAGCTGAAATCGCTACCTTTAAAGAAGGCACTGAGTCTATC
TGCCACAGGCCGAAAAATGAAACTCTTGTATTGTCAAAAATGACTATTCATGGCCAAGAA
ACAAAGTACTTTTACCTCTATGAGAGAAGGATTGAAAATCTTGCTGCCATCAAAATTCAG
ACAGCATTTCGCAGCTATCTTGCAAGGAAAGCTTTGAGAGCACTAAAGGGACTAGTGAGG
CTTCAAGCTATTGTTCGTGGTAGGGCTGTTCGACGTCAGGCTATTGCTACACTTAGGTCC
TTGCAGTCAATTGTAAACATTCAATCGGAAGTATGTGCAAAGAGATGTGATAATCAGGTG
AAAACTACAGTACATTGTCAAGAAAATACGTTGCTGGATCTCGGAGAGAAAGATATCAAG
ATTGATCTGAACAGCCAGAAAAGGTGGGACAATCGGTATTTATCTAAGGAAGAAGCAAAC
AAGATGTTCTCAAGCAAAAGGGAGGCTGCGATCAAGAGAGAACGTATAAGAGAATACTGG
TTAAGCCATCGAAGGTCAACAGAATCAGACGTAAATGGAAGAAGGCGATACTGGTTAGAA
CAATGGGTAGATGCTCAGCTGGCTAAAAGAGATGACCTTAAGAACGTGGACACGCTTTTC
TCCGCAAGAAACAGAGAAGAATTCGAGAGAAAAGAAATGAAACCAAAGTCTTCTCTAAGA
CAATACCATACAGATCAAGAATTGGTTTCACCAGTATATGTTCCAAGAAGATCATTTCAC
CACAGAAGACAGAAATCAAGTGGGGATCATGACAATACTTTCATGGGCTCTCCTTCGATT
CCAACTTACATGGCAGCCACGGAATCTGCAAAAGCAAAAGCAAGGTCAATGAGTTCACCA
AGGCTAAGACCAATCAATACTGATGTCTACTCTGAGATAAATTCTCCCCTACAAGTACAA
ACTATCTCCCCATATCTTCTATCAACAGCGATGCCACGGTCACAAGTAGGATTGGAAGTG
TTCCTGGCTTCTCACAAAGATCACCATGCTTAA