Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017584
CDS Infomation

pacid=37440470 polypeptide=PGSC0003DMP400012081 locus=PGSC0003DMG400006820 ID=PGSC0003DMT400017584.v4.03 annot-version=v4.03
Sequence

ATGCCGCCCAAATCCGCACAAAGCAAACCGTACTTCTTCTACGGCCACCGGAAACCTACT
CAGCATCGTCCCACAGTTCAAGGAGGCCTTTTTTCCAATCGCCAAACCATAAACCCAAAC
CGCACCACCAAAAACTCACCTTCCTCTGTTACCCAAGGTGATTTTCAGCTTCAAAAATGG
GACCCGGATGGAGTTTCGGGTCAACAATCCAGAGACCCATCTCAGGAATTCTTCTCTTTA
GCTCAGCGCCTATCACCAATTGCTAGGTATATAGTGGATTCATTCAGGAAACATGGGAAT
TGGGGTGCACCCCTTTTGGCTGACCTTAATAGTCTACGAAGGGTCACTCCTAAGCTTGTA
ACTGAGGTTCTCAAACACCCTAATCTTGATCCCAAAATTTCCTCCAAGTTCTTCTATTGG
GCTGGAAAACAGAAAGGTTACAGGCATGATTTCTCTTGTTACAATGCCTTTGCTTATGGT
CTGAATCGGGCGAATCAATTTCGGACAGCTGATCAGGTTCCTGAGCTGATGCATATGCAA
GGAAAGCCACCTAGTGAGAAACAATTTGAGATCTTAATCAGAATGCATGGTGATGCTAAC
AGGGGTCTTAGAGTATACTATGTTTATGAGAAAATGAAAAAATTTGGGGTAAAACCAAGA
GTATTTCTGTATAACAGAATAATGGATGCTTTGGTTAAAACCAATCATTTGGACATGGCT
ATGTCAGTTTATGATGATTTCAAGAAGGATGGGTTGGTGGAGGAAAGTATGACTTTCATG
ATCTTGATAAAGGGCCTGTGCAAGTTAGGACGGATGGATGAAGTGTTTGAGCTTTTGGGT
CGGATGAGAGAGAATCGTTGCAAACCAGATGTGTTTGCTTACACAGCAATGGTAAAGATA
TTGGTTGCAGAGCGGAACTTGGATGGTTGTTCAAAGGTTTGGAAGGAGATGCAGCAGGAT
GCAGTTGAACCTGATGTTATTGCTTATTCAACTTTTATTGCTGGTTTGTGTAAAAATAAT
CAAGTTGACAAAGGCTATGAGTTGTTCAAGGAAATGAAACAAAAGAATATTTTGATAGAT
AGGGGGATTTATGGATCTTTGATTGAATCGTTTGTAGCAAATGGGAAAGTTGGTTTAGCT
TGTGATTTGCTTAAAGATCTGATAGAGTCGGGCTATAGGGCTGATTTGGCAATCTATAAT
TCCATTATTGAAGGTCTCTGCAATGCAAAACGAACAGATAGGGCCTATAAACTTTTCCAA
ATCACAGTTCAAGAAGATCTTTGTCCTGACTTTTCCACTGTGAAGCCCATATTGGTGTCT
TATGCAGAGTCAAAGAAAATGGATGAAATTTGCAAATTGCTTGAGGAACTGCAGCGATTA
AGCCATTGCATTAGTGATGATTTATCCAAATTCTTCACATATATGGTAGAGAAGGGTGAT
AGGATTATGATTGCTTTAGAAGTCTTTGAATATTTGAAAGTAAAAGATTATTGCGGTGTT
CCAATATATAACATTCTTATGGAGGCGCTCTATCAGAATGGCGAGGTGAACAAGGCACTC
ACATTGTTCTCTGAGTTGAGAAGTTCAGATTATGAACCTGATTCATCAGCTTATAGCAAT
GCCGTCCAGTGTTTTGTAGAGGTCGGAGATGTACAGGAGGCATCTATTTGCTATAACAGA
ATTAAAGAGATGTCTTTGATTCCCTCAGTTGCTGCATATCGTTCTCTTGTCATAGGGCTT
TGCAAAATAGGACAGATTGATCCAGCTATGATGCTAATTCGTGACTGCCTAGGCAATGTG
GCGAGTGGCCCTATTGAGTTTAAGTGTATTCTCACTATTATTCATGTCTGTAAAATGAAT
GATGCCGAGAAGGTAATGAAAGTTCTTGATGAATTGCTCGAAGAGGGCTTTTCTCCTGAT
AATGCTGTATATTGCGCTGTAATTTATGGCATGTGCAAACATGGAACAATTGAAGAAGCA
CAGAAAGTTTTTGCAAGTATGAGAAAGCGAAAACATCTTACTGAAGCCGACTTAGTTGTT
TATGATGAGATGCTTATTGACCACATGAAGAAGAAGACAGCAGACTTGCTGTTGTCTGGG
TTGAAATTTTTCGGTCTGGAGTCAAAGTTAAAAGCAAAGGGGTGTACTCTTTTAGCAGGT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400012081
PEP Infomation

pacid=37440470 transcript=PGSC0003DMT400017584 locus=PGSC0003DMG400006820 ID=PGSC0003DMT400017584.v4.03 annot-version=v4.03
Sequence

MPPKSAQSKPYFFYGHRKPTQHRPTVQGGLFSNRQTINPNRTTKNSPSSVTQGDFQLQKW
DPDGVSGQQSRDPSQEFFSLAQRLSPIARYIVDSFRKHGNWGAPLLADLNSLRRVTPKLV
TEVLKHPNLDPKISSKFFYWAGKQKGYRHDFSCYNAFAYGLNRANQFRTADQVPELMHMQ
GKPPSEKQFEILIRMHGDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDALVKTNHLDMA
MSVYDDFKKDGLVEESMTFMILIKGLCKLGRMDEVFELLGRMRENRCKPDVFAYTAMVKI
LVAERNLDGCSKVWKEMQQDAVEPDVIAYSTFIAGLCKNNQVDKGYELFKEMKQKNILID
RGIYGSLIESFVANGKVGLACDLLKDLIESGYRADLAIYNSIIEGLCNAKRTDRAYKLFQ
ITVQEDLCPDFSTVKPILVSYAESKKMDEICKLLEELQRLSHCISDDLSKFFTYMVEKGD
RIMIALEVFEYLKVKDYCGVPIYNILMEALYQNGEVNKALTLFSELRSSDYEPDSSAYSN
AVQCFVEVGDVQEASICYNRIKEMSLIPSVAAYRSLVIGLCKIGQIDPAMMLIRDCLGNV
ASGPIEFKCILTIIHVCKMNDAEKVMKVLDELLEEGFSPDNAVYCAVIYGMCKHGTIEEA
QKVFASMRKRKHLTEADLVVYDEMLIDHMKKKTADLLLSGLKFFGLESKLKAKGCTLLAG
*

Transcript Sequence

Transcript ID

PGSC0003DMT400017584
Transcript Infomation

pacid=37440470 locus=PGSC0003DMG400006820 ID=PGSC0003DMT400017584.v4.03 annot-version=v4.03
Sequence

ATGCCGCCCAAATCCGCACAAAGCAAACCGTACTTCTTCTACGGCCACCGGAAACCTACT
CAGCATCGTCCCACAGTTCAAGGAGGCCTTTTTTCCAATCGCCAAACCATAAACCCAAAC
CGCACCACCAAAAACTCACCTTCCTCTGTTACCCAAGGTGATTTTCAGCTTCAAAAATGG
GACCCGGATGGAGTTTCGGGTCAACAATCCAGAGACCCATCTCAGGAATTCTTCTCTTTA
GCTCAGCGCCTATCACCAATTGCTAGGTATATAGTGGATTCATTCAGGAAACATGGGAAT
TGGGGTGCACCCCTTTTGGCTGACCTTAATAGTCTACGAAGGGTCACTCCTAAGCTTGTA
ACTGAGGTTCTCAAACACCCTAATCTTGATCCCAAAATTTCCTCCAAGTTCTTCTATTGG
GCTGGAAAACAGAAAGGTTACAGGCATGATTTCTCTTGTTACAATGCCTTTGCTTATGGT
CTGAATCGGGCGAATCAATTTCGGACAGCTGATCAGGTTCCTGAGCTGATGCATATGCAA
GGAAAGCCACCTAGTGAGAAACAATTTGAGATCTTAATCAGAATGCATGGTGATGCTAAC
AGGGGTCTTAGAGTATACTATGTTTATGAGAAAATGAAAAAATTTGGGGTAAAACCAAGA
GTATTTCTGTATAACAGAATAATGGATGCTTTGGTTAAAACCAATCATTTGGACATGGCT
ATGTCAGTTTATGATGATTTCAAGAAGGATGGGTTGGTGGAGGAAAGTATGACTTTCATG
ATCTTGATAAAGGGCCTGTGCAAGTTAGGACGGATGGATGAAGTGTTTGAGCTTTTGGGT
CGGATGAGAGAGAATCGTTGCAAACCAGATGTGTTTGCTTACACAGCAATGGTAAAGATA
TTGGTTGCAGAGCGGAACTTGGATGGTTGTTCAAAGGTTTGGAAGGAGATGCAGCAGGAT
GCAGTTGAACCTGATGTTATTGCTTATTCAACTTTTATTGCTGGTTTGTGTAAAAATAAT
CAAGTTGACAAAGGCTATGAGTTGTTCAAGGAAATGAAACAAAAGAATATTTTGATAGAT
AGGGGGATTTATGGATCTTTGATTGAATCGTTTGTAGCAAATGGGAAAGTTGGTTTAGCT
TGTGATTTGCTTAAAGATCTGATAGAGTCGGGCTATAGGGCTGATTTGGCAATCTATAAT
TCCATTATTGAAGGTCTCTGCAATGCAAAACGAACAGATAGGGCCTATAAACTTTTCCAA
ATCACAGTTCAAGAAGATCTTTGTCCTGACTTTTCCACTGTGAAGCCCATATTGGTGTCT
TATGCAGAGTCAAAGAAAATGGATGAAATTTGCAAATTGCTTGAGGAACTGCAGCGATTA
AGCCATTGCATTAGTGATGATTTATCCAAATTCTTCACATATATGGTAGAGAAGGGTGAT
AGGATTATGATTGCTTTAGAAGTCTTTGAATATTTGAAAGTAAAAGATTATTGCGGTGTT
CCAATATATAACATTCTTATGGAGGCGCTCTATCAGAATGGCGAGGTGAACAAGGCACTC
ACATTGTTCTCTGAGTTGAGAAGTTCAGATTATGAACCTGATTCATCAGCTTATAGCAAT
GCCGTCCAGTGTTTTGTAGAGGTCGGAGATGTACAGGAGGCATCTATTTGCTATAACAGA
ATTAAAGAGATGTCTTTGATTCCCTCAGTTGCTGCATATCGTTCTCTTGTCATAGGGCTT
TGCAAAATAGGACAGATTGATCCAGCTATGATGCTAATTCGTGACTGCCTAGGCAATGTG
GCGAGTGGCCCTATTGAGTTTAAGTGTATTCTCACTATTATTCATGTCTGTAAAATGAAT
GATGCCGAGAAGGTAATGAAAGTTCTTGATGAATTGCTCGAAGAGGGCTTTTCTCCTGAT
AATGCTGTATATTGCGCTGTAATTTATGGCATGTGCAAACATGGAACAATTGAAGAAGCA
CAGAAAGTTTTTGCAAGTATGAGAAAGCGAAAACATCTTACTGAAGCCGACTTAGTTGTT
TATGATGAGATGCTTATTGACCACATGAAGAAGAAGACAGCAGACTTGCTGTTGTCTGGG
TTGAAATTTTTCGGTCTGGAGTCAAAGTTAAAAGCAAAGGGGTGTACTCTTTTAGCAGGT
TGA