Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017573
CDS Infomation

pacid=37440658 polypeptide=PGSC0003DMP400012073 locus=PGSC0003DMG400006816 ID=PGSC0003DMT400017573.v4.03 annot-version=v4.03
Sequence

ATGAAAGTATCTAATGGAAACTGTAGTTGTGCAGTGGAAAGAGACGATAGTAATACTACT
ACAACTAGTAGTGTCAACGATAGTAATACTACGACTGGTAGTCTCAGTATAAGTGGTGAT
GACGGCGCCGGAGAAGTGGGTGGAAGGGTGGTGGCAGTGGTGGGAGTGAAGTTAGATTCC
AGAAGTAAAGAGTTGCTTACTTGGGCTTTGGTTAAGGTTGCTCAGACTGGAGATCATGTA
GTGGCTGTACATGTTATCGATCCAAATTCTGATAAATCAGAACCTCTTTCACTGGTGAAG
TCATTTGACTTGATGCTGGCTGCTTATGAGGGCTTCTGCAATTTAAAGCAGGTGCATTTG
AAGCTTAAAGTCTGTCGAGGATCACCAGTTCGTAAAGTTCTTGCTCGCGAGGCGAAATTG
GAAAGTGCTATAAATTTGATTATTGGGACTTCAGGCAGTCATCATGCCATTCGGTCGTCA
GTGTCACTTGCAAAATACTGTGCTAGGAAAGTGACAAAGAGCATCTCTGTTATTGCCGTT
GACAATGGCAAGATTGTTTATCAAAGGGAAGCTAGTGCTTTGGATGGAGATGAATCTAGT
GACTCAGATGTGCCCAAATCAAGATTCAAGAGGAGGAAGACACTGAACAAAAGTCCTCTG
AGCTTAATGCCTAAGAAAGCTGTGGAAGAAAACTCTTGTACAACAGAGAACAATTACATG
GCTTTGGTGCCTGTTAAGCCTATTGAAGTCCGGGAGTCAAAGTCTCGCTGGACACTGCTT
CGACGAGTTTTTCTTCAGAACATAGTGGCACCTGATAAATTTCCCGCAAAAAGGTCTTCT
GTGATGCATTGGGTTTGGAAACGACCAAGTCGGCAATCTTTTGCAGCTATCTACCCTGAT
CATAAACAGAGTGTATCTGACAAGGATGAGCCTCATTGTACAAACTTGGATGAAGGGAAG
GGGGCAATTATTCCTGTCGGAAGTGATGCTGATCCAATTTCAAATGAATGCTTTATTGTC
CTTCCTGAGGAACTGGAGGGTCTTACTGAAAGGTACTCATCAATGTGCAGATTGTTCAAT
TACCAGGAGCTTTGTTCAGCAACATCTGATTTCCTGCCAGAGAATTTGATTGGAAAAGGA
GGCAGCAGTAAGGTTTACAAAGGGTGCCTTCCAGATGGCAAGCAACTGGCTGTGAAAATA
TTGAAGCCATCAGAAGCTGTGGCACAGCAATTCCGTTCAGAGATAGAGATACTCACAACT
CTGCATCACAAGCACATTATATCACTGATTGGGTTTTGTTTAGAGGAGAACAACCTTTTA
CTGGTTTATGATCTGTTATCCAGAGGAAGCTTAGAAGAGAATCTCCATGGTTCCAAAAAG
GATGAAAATTCATTTAGCTGGGCAGATAGATACAAGGTTTCTTTGGGTGTTGCTGAGGCA
CTGGACCACCTACACAATGCAGCTGATGGGCCCATAATCCACAGGGATGTGAAATCTTCA
AACATTCTCCTGTCCGATGATTCTGAGCCACAGCTTTCAGATTTTGGACTTGCAACACCG
GCCTCAAGCTGTTCAAATCATTTAGATAGCATTGATGTTGCTGGAACATTTGGCTACTTG
GCTCCTGAGTACTTTATGCATGGAAAGATAACTGAAAAGATTGACGTGTATGCATTTGGT
GTTGTTCTCCTTGAGCTTTTGTCTGGTAAAAAGCCAATTGATAATGGCAATGGGAAAGGT
CAGGAAAGCTTAGTCATGTGGGCGAAACAAGTTCTGAAGGGTGGGAACACGAAGGAGTTG
CTAGATCCGAGCTTGATTGACACTTATGATCATGATCAATTTGAGAGAATGGTCTCGGCG
GCATCACTGTGCATCAGACGAGCTCCTGGAATTAGACCTCAAATTGACATCGTGGTAAAA
CTCCTCCAAGGTGAGGCTGAAACAATTAAGTGGGCGATTGAAGAAGGCAAATTTTCAGAA
GAAGTAGATGCTGTCGATGGTGAACAACCACCCTCAAACATACAATCCTTTATTAATCTC
GCATTGCTGAATTTGGAGGATGAGTCCTCACTTTCATGTACCAGCACGGGACCAACCATT
TCCGTGGAGGATTATTTGCAAGGGAGATTTAGTCGCTCTTCAAGTTTTGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012073
PEP Infomation

pacid=37440658 transcript=PGSC0003DMT400017573 locus=PGSC0003DMG400006816 ID=PGSC0003DMT400017573.v4.03 annot-version=v4.03
Sequence

MKVSNGNCSCAVERDDSNTTTTSSVNDSNTTTGSLSISGDDGAGEVGGRVVAVVGVKLDS
RSKELLTWALVKVAQTGDHVVAVHVIDPNSDKSEPLSLVKSFDLMLAAYEGFCNLKQVHL
KLKVCRGSPVRKVLAREAKLESAINLIIGTSGSHHAIRSSVSLAKYCARKVTKSISVIAV
DNGKIVYQREASALDGDESSDSDVPKSRFKRRKTLNKSPLSLMPKKAVEENSCTTENNYM
ALVPVKPIEVRESKSRWTLLRRVFLQNIVAPDKFPAKRSSVMHWVWKRPSRQSFAAIYPD
HKQSVSDKDEPHCTNLDEGKGAIIPVGSDADPISNECFIVLPEELEGLTERYSSMCRLFN
YQELCSATSDFLPENLIGKGGSSKVYKGCLPDGKQLAVKILKPSEAVAQQFRSEIEILTT
LHHKHIISLIGFCLEENNLLLVYDLLSRGSLEENLHGSKKDENSFSWADRYKVSLGVAEA
LDHLHNAADGPIIHRDVKSSNILLSDDSEPQLSDFGLATPASSCSNHLDSIDVAGTFGYL
APEYFMHGKITEKIDVYAFGVVLLELLSGKKPIDNGNGKGQESLVMWAKQVLKGGNTKEL
LDPSLIDTYDHDQFERMVSAASLCIRRAPGIRPQIDIVVKLLQGEAETIKWAIEEGKFSE
EVDAVDGEQPPSNIQSFINLALLNLEDESSLSCTSTGPTISVEDYLQGRFSRSSSFD*

Transcript Sequence

Transcript ID

PGSC0003DMT400017573
Transcript Infomation

pacid=37440658 locus=PGSC0003DMG400006816 ID=PGSC0003DMT400017573.v4.03 annot-version=v4.03
Sequence

ATGAAAGTATCTAATGGAAACTGTAGTTGTGCAGTGGAAAGAGACGATAGTAATACTACT
ACAACTAGTAGTGTCAACGATAGTAATACTACGACTGGTAGTCTCAGTATAAGTGGTGAT
GACGGCGCCGGAGAAGTGGGTGGAAGGGTGGTGGCAGTGGTGGGAGTGAAGTTAGATTCC
AGAAGTAAAGAGTTGCTTACTTGGGCTTTGGTTAAGGTTGCTCAGACTGGAGATCATGTA
GTGGCTGTACATGTTATCGATCCAAATTCTGATAAATCAGAACCTCTTTCACTGGTGAAG
TCATTTGACTTGATGCTGGCTGCTTATGAGGGCTTCTGCAATTTAAAGCAGGTGCATTTG
AAGCTTAAAGTCTGTCGAGGATCACCAGTTCGTAAAGTTCTTGCTCGCGAGGCGAAATTG
GAAAGTGCTATAAATTTGATTATTGGGACTTCAGGCAGTCATCATGCCATTCGGTCGTCA
GTGTCACTTGCAAAATACTGTGCTAGGAAAGTGACAAAGAGCATCTCTGTTATTGCCGTT
GACAATGGCAAGATTGTTTATCAAAGGGAAGCTAGTGCTTTGGATGGAGATGAATCTAGT
GACTCAGATGTGCCCAAATCAAGATTCAAGAGGAGGAAGACACTGAACAAAAGTCCTCTG
AGCTTAATGCCTAAGAAAGCTGTGGAAGAAAACTCTTGTACAACAGAGAACAATTACATG
GCTTTGGTGCCTGTTAAGCCTATTGAAGTCCGGGAGTCAAAGTCTCGCTGGACACTGCTT
CGACGAGTTTTTCTTCAGAACATAGTGGCACCTGATAAATTTCCCGCAAAAAGGTCTTCT
GTGATGCATTGGGTTTGGAAACGACCAAGTCGGCAATCTTTTGCAGCTATCTACCCTGAT
CATAAACAGAGTGTATCTGACAAGGATGAGCCTCATTGTACAAACTTGGATGAAGGGAAG
GGGGCAATTATTCCTGTCGGAAGTGATGCTGATCCAATTTCAAATGAATGCTTTATTGTC
CTTCCTGAGGAACTGGAGGGTCTTACTGAAAGGTACTCATCAATGTGCAGATTGTTCAAT
TACCAGGAGCTTTGTTCAGCAACATCTGATTTCCTGCCAGAGAATTTGATTGGAAAAGGA
GGCAGCAGTAAGGTTTACAAAGGGTGCCTTCCAGATGGCAAGCAACTGGCTGTGAAAATA
TTGAAGCCATCAGAAGCTGTGGCACAGCAATTCCGTTCAGAGATAGAGATACTCACAACT
CTGCATCACAAGCACATTATATCACTGATTGGGTTTTGTTTAGAGGAGAACAACCTTTTA
CTGGTTTATGATCTGTTATCCAGAGGAAGCTTAGAAGAGAATCTCCATGGTTCCAAAAAG
GATGAAAATTCATTTAGCTGGGCAGATAGATACAAGGTTTCTTTGGGTGTTGCTGAGGCA
CTGGACCACCTACACAATGCAGCTGATGGGCCCATAATCCACAGGGATGTGAAATCTTCA
AACATTCTCCTGTCCGATGATTCTGAGCCACAGCTTTCAGATTTTGGACTTGCAACACCG
GCCTCAAGCTGTTCAAATCATTTAGATAGCATTGATGTTGCTGGAACATTTGGCTACTTG
GCTCCTGAGTACTTTATGCATGGAAAGATAACTGAAAAGATTGACGTGTATGCATTTGGT
GTTGTTCTCCTTGAGCTTTTGTCTGGTAAAAAGCCAATTGATAATGGCAATGGGAAAGGT
CAGGAAAGCTTAGTCATGTGGGCGAAACAAGTTCTGAAGGGTGGGAACACGAAGGAGTTG
CTAGATCCGAGCTTGATTGACACTTATGATCATGATCAATTTGAGAGAATGGTCTCGGCG
GCATCACTGTGCATCAGACGAGCTCCTGGAATTAGACCTCAAATTGACATCGTGGTAAAA
CTCCTCCAAGGTGAGGCTGAAACAATTAAGTGGGCGATTGAAGAAGGCAAATTTTCAGAA
GAAGTAGATGCTGTCGATGGTGAACAACCACCCTCAAACATACAATCCTTTATTAATCTC
GCATTGCTGAATTTGGAGGATGAGTCCTCACTTTCATGTACCAGCACGGGACCAACCATT
TCCGTGGAGGATTATTTGCAAGGGAGATTTAGTCGCTCTTCAAGTTTTGACTAA