Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017546
CDS Infomation

pacid=37437452 polypeptide=PGSC0003DMP400012055 locus=PGSC0003DMG400006803 ID=PGSC0003DMT400017546.v4.03 annot-version=v4.03
Sequence

ATGTGCACTGGCCCAGAAAGACCCAACCAATCTGTTACTGATTCTACATCTAGTATGAAG
GGTATTACTAAACTCACAGTTGAGACTGAAGATTCTTTTTCTAGTTTGCTTGAACTTGCT
GCAAACAACGATCTTGATGGTTTTAAAAGATCTGTTGAGCTCGATGCTTCTGCTATTGAT
GAGGTGGGGCTATGGTTGGTTAGGAAAAAAGGTGCAAAACAGATTGTTAACGAGGAAAGG
ACTCCTTTAATGGTAGCTGCCACTTATGGAAGTTTAGATGTTTTGAAGTTGATTATCTCT
AACCCTGTCGTTGATGTTAACCGTGTTTGTGGTCCAAACAAATGCACTGCTCTTCACTGT
GCAACCTCCAGTGGTTCTGTCAATGCTGTTGATGCAGTTAAGTTGCTACTATCAGCTGGT
GCTGATCCTAATGTTGAGGATGCTAATGGCCAGCGGCCAGCTGATGTGATCGTTGTTCCA
CCAAAGCTTCCTGGTGCTAGAGCTTCTCTAGAAGAACTGCTTCTGAACAATTCATCTGAT
GGCTCAGTTGGTGACTGCAAATTGAGAGTATCTGTGGCTACTTCAGATGCATCCTCTCCC
ATTCTCTCCCCATCACCAGAAAATGGATCTCCTTCATCATTGGAGTCCTCATCTTCCCCT
ATGGCATTGAAGTTCAGTGATATCCCTGCAAATTCTGCACGAGAGAAAAAAGAATATCCA
ATAGATCCATCTCTCCCTGATATCCAGAACAGTATATATTCAACAGATGAGTTCCGCATG
TTCTCTTTTAAGGTCCGTCCATGTTCTAGGGCCTATTCACATGACTGGACGGAGTGCCCA
TTTGTCCACCCTGGAGAGAATGCTCGCAGAAGAGATCCAAGGAAGTACCACTATAGCTGT
GTGCCTTGTCCTGAATTTCGCAAGGGGGCCTGCCGGCGTGGTGATATGTGTGAATATGCT
CATGGGGTGTTTGAGTGCTGGCTACACCCCGCTCAGTATCGTACCCGTCTGTGCAAGGAT
GGTACAAGCTGTGCTAGGCGAATTTGTTTTTTTGCCCATACTACTGAGGAGCTTAGGCCC
TTGTATGTCTCCACTGGATCTGCAGTTCCATCTCCTAGATCAGCTGCTTCTGCAGCTAGT
GTGATGGACATGGCTGCAGCACTGAACCTTTTTCCTGGTTCGCCCTCAGCGCACTCTGTG
ATGTCTCCTTCTGCATTTAACCAACCAATGTCCCCCAGTGCCAATGGAATGTCTCATTCA
CCTGCACCATGGCCTCAACCAAATGTCCCAACTCTTCATCTACCTGGAAGCAATCTGCAG
TCTAGCCGTCTGAGGTCTTCCCTTAGTGCACGAGACATTCCGCCTGAGGATTTTAACATG
TTGCAGGATTTTGATGCCCAACAACTAGTTTTCAATGACATGGCTTGCTATTCACAGCAG
CGTCCTAATTCTGCCTCTTTGAACCGATCTGGTCGGTCCAAGACACTAACTCCTTCAAAT
CTTGAAGAGCTATTTTCTGCTGAGATGAACTCTTCTCCACGATTTTCTGATCAGGCAGCG
GCTTGTGGTGTTTTTTCCCCATCACACAAGTCGGCTTACTTTAATCAGTTCCAACAGCAA
CAGAACATGCTTTCACCAATTAATACTAACGTTTTTTCGCCGAAAAACATTGAGCACCCT
CTTTTGCAGGCTTCTTTTGGTGTTTCCTCACCTGGAAGGATGTCCCCAAGAAGCATGGAG
CCCATTTCTCCCATGAGTGCTCGCCTTTCAGCATTTGTTCAGCGTGAGAAGCAACAGCAA
CAGCAACAGCAACAGCTGCGAAGCCTCAGCTCTCGTGATCTTGGATCCAATAATGTATCA
ATTGTTGGATCCCCAGTGGGTAATTCTTGGTCCAACTGGGGGTCTCCCAATGAGAAGGTT
GACTGGTCTGTCAATGGAAATGGACTTGGACACCTGCCCAGATCATCTTCTTTTGAGCAG
CTCAATAATGGAGAAGAGCCTGACCTATCATGGGTGCAATCTCTTGTGAAGGAATCTCCA
ACCGAGATGAAAGAGAAGCAGGCCGCTCCTAATTCAGTTGCTGCACCATCCGGTGAGAAG
AGTTTGAAAAACAGTTCCCAAATTGATTCAGTTGATCATTCAGTTTTAGGAGCTTGGCTC
GAGCAGATGCAACTTGATCAGCTTGTCGCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012055
PEP Infomation

pacid=37437452 transcript=PGSC0003DMT400017546 locus=PGSC0003DMG400006803 ID=PGSC0003DMT400017546.v4.03 annot-version=v4.03
Sequence

MCTGPERPNQSVTDSTSSMKGITKLTVETEDSFSSLLELAANNDLDGFKRSVELDASAID
EVGLWLVRKKGAKQIVNEERTPLMVAATYGSLDVLKLIISNPVVDVNRVCGPNKCTALHC
ATSSGSVNAVDAVKLLLSAGADPNVEDANGQRPADVIVVPPKLPGARASLEELLLNNSSD
GSVGDCKLRVSVATSDASSPILSPSPENGSPSSLESSSSPMALKFSDIPANSAREKKEYP
IDPSLPDIQNSIYSTDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSC
VPCPEFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCARRICFFAHTTEELRP
LYVSTGSAVPSPRSAASAASVMDMAAALNLFPGSPSAHSVMSPSAFNQPMSPSANGMSHS
PAPWPQPNVPTLHLPGSNLQSSRLRSSLSARDIPPEDFNMLQDFDAQQLVFNDMACYSQQ
RPNSASLNRSGRSKTLTPSNLEELFSAEMNSSPRFSDQAAACGVFSPSHKSAYFNQFQQQ
QNMLSPINTNVFSPKNIEHPLLQASFGVSSPGRMSPRSMEPISPMSARLSAFVQREKQQQ
QQQQQLRSLSSRDLGSNNVSIVGSPVGNSWSNWGSPNEKVDWSVNGNGLGHLPRSSSFEQ
LNNGEEPDLSWVQSLVKESPTEMKEKQAAPNSVAAPSGEKSLKNSSQIDSVDHSVLGAWL
EQMQLDQLVA*

Transcript Sequence

Transcript ID

PGSC0003DMT400017546
Transcript Infomation

pacid=37437452 locus=PGSC0003DMG400006803 ID=PGSC0003DMT400017546.v4.03 annot-version=v4.03
Sequence

ATGTGCACTGGCCCAGAAAGACCCAACCAATCTGTTACTGATTCTACATCTAGTATGAAG
GGTATTACTAAACTCACAGTTGAGACTGAAGATTCTTTTTCTAGTTTGCTTGAACTTGCT
GCAAACAACGATCTTGATGGTTTTAAAAGATCTGTTGAGCTCGATGCTTCTGCTATTGAT
GAGGTGGGGCTATGGTTGGTTAGGAAAAAAGGTGCAAAACAGATTGTTAACGAGGAAAGG
ACTCCTTTAATGGTAGCTGCCACTTATGGAAGTTTAGATGTTTTGAAGTTGATTATCTCT
AACCCTGTCGTTGATGTTAACCGTGTTTGTGGTCCAAACAAATGCACTGCTCTTCACTGT
GCAACCTCCAGTGGTTCTGTCAATGCTGTTGATGCAGTTAAGTTGCTACTATCAGCTGGT
GCTGATCCTAATGTTGAGGATGCTAATGGCCAGCGGCCAGCTGATGTGATCGTTGTTCCA
CCAAAGCTTCCTGGTGCTAGAGCTTCTCTAGAAGAACTGCTTCTGAACAATTCATCTGAT
GGCTCAGTTGGTGACTGCAAATTGAGAGTATCTGTGGCTACTTCAGATGCATCCTCTCCC
ATTCTCTCCCCATCACCAGAAAATGGATCTCCTTCATCATTGGAGTCCTCATCTTCCCCT
ATGGCATTGAAGTTCAGTGATATCCCTGCAAATTCTGCACGAGAGAAAAAAGAATATCCA
ATAGATCCATCTCTCCCTGATATCCAGAACAGTATATATTCAACAGATGAGTTCCGCATG
TTCTCTTTTAAGGTCCGTCCATGTTCTAGGGCCTATTCACATGACTGGACGGAGTGCCCA
TTTGTCCACCCTGGAGAGAATGCTCGCAGAAGAGATCCAAGGAAGTACCACTATAGCTGT
GTGCCTTGTCCTGAATTTCGCAAGGGGGCCTGCCGGCGTGGTGATATGTGTGAATATGCT
CATGGGGTGTTTGAGTGCTGGCTACACCCCGCTCAGTATCGTACCCGTCTGTGCAAGGAT
GGTACAAGCTGTGCTAGGCGAATTTGTTTTTTTGCCCATACTACTGAGGAGCTTAGGCCC
TTGTATGTCTCCACTGGATCTGCAGTTCCATCTCCTAGATCAGCTGCTTCTGCAGCTAGT
GTGATGGACATGGCTGCAGCACTGAACCTTTTTCCTGGTTCGCCCTCAGCGCACTCTGTG
ATGTCTCCTTCTGCATTTAACCAACCAATGTCCCCCAGTGCCAATGGAATGTCTCATTCA
CCTGCACCATGGCCTCAACCAAATGTCCCAACTCTTCATCTACCTGGAAGCAATCTGCAG
TCTAGCCGTCTGAGGTCTTCCCTTAGTGCACGAGACATTCCGCCTGAGGATTTTAACATG
TTGCAGGATTTTGATGCCCAACAACTAGTTTTCAATGACATGGCTTGCTATTCACAGCAG
CGTCCTAATTCTGCCTCTTTGAACCGATCTGGTCGGTCCAAGACACTAACTCCTTCAAAT
CTTGAAGAGCTATTTTCTGCTGAGATGAACTCTTCTCCACGATTTTCTGATCAGGCAGCG
GCTTGTGGTGTTTTTTCCCCATCACACAAGTCGGCTTACTTTAATCAGTTCCAACAGCAA
CAGAACATGCTTTCACCAATTAATACTAACGTTTTTTCGCCGAAAAACATTGAGCACCCT
CTTTTGCAGGCTTCTTTTGGTGTTTCCTCACCTGGAAGGATGTCCCCAAGAAGCATGGAG
CCCATTTCTCCCATGAGTGCTCGCCTTTCAGCATTTGTTCAGCGTGAGAAGCAACAGCAA
CAGCAACAGCAACAGCTGCGAAGCCTCAGCTCTCGTGATCTTGGATCCAATAATGTATCA
ATTGTTGGATCCCCAGTGGGTAATTCTTGGTCCAACTGGGGGTCTCCCAATGAGAAGGTT
GACTGGTCTGTCAATGGAAATGGACTTGGACACCTGCCCAGATCATCTTCTTTTGAGCAG
CTCAATAATGGAGAAGAGCCTGACCTATCATGGGTGCAATCTCTTGTGAAGGAATCTCCA
ACCGAGATGAAAGAGAAGCAGGCCGCTCCTAATTCAGTTGCTGCACCATCCGGTGAGAAG
AGTTTGAAAAACAGTTCCCAAATTGATTCAGTTGATCATTCAGTTTTAGGAGCTTGGCTC
GAGCAGATGCAACTTGATCAGCTTGTCGCCTAG