Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017539
CDS Infomation

pacid=37440447 polypeptide=PGSC0003DMP400012049 locus=PGSC0003DMG400006800 ID=PGSC0003DMT400017539.v4.03 annot-version=v4.03
Sequence

ATGGGTGGGATTGGCAAAACGACACTCGCTAAAAAAGCTTATGATTATCCTCGAGTTAGG
TCTCGCTTTGATGTTCATGCATGGGTTACTGTATCTCGAGAGTATGGAATGAGGAGGTTG
CTGTTAAGTCTAGTCCGTTGCATTCCAGGTATGACGACAGATAAGCTTGTAGAGAAAACT
GAGGATCAGTTAGCGGAGTCATTATATAGAAAACTTAAGGATCGAAGATATCTTATTGTC
ATTGATGATATTTGGAGTACTAAAGTTTGGGACGATGTAACAAGATGTTTTCCAGATGAT
GACAATGGGAGTCGAATCATATTAACGAGTAGGCTCAAGGATGTGGCTGCTTATGCTAAT
CCTGATAGCCCTTTGCATGAGATGGGGGTCTTAAGTTTAGATGATAGTTGGAAATTACTC
TCCATTAAGGTATTTGGGGTAAATGATCTTTGTCCTTCTGAGTTAGAGGATATCGGGAAG
CAAATAGCGGAAAGATGTGGTGGACTTCCTTTGGCAATTCTGGTGGTTGCAGGGCATCTT
TCTAAGATTTCTAGGAGAAGAGAAAGTTGGATCATTGTTGCCAAGACTGTTAATTCAGTT
GTTGCGAACGATCCTGATAAATGCCTAGGAGTGCTCGGTATGAGTTACAATTACCTGTCG
AACCACCTCAAGCCATGCTTCCTCTCTATGGGTGCTTTTCCGGAAGATTTTGAAATAAAA
GCTCGGACATTGATCCAAGTTTGGGTAGCTGAAGGGTTTCTAAAAGCAGAAAGGGTCAAG
AGCTTGGAAAAAGTTGCAGAAGAGTGTTTGGAGGATCTTATTAGTAGAAATCTAATAATG
ATTAGAAAGAGGAGGTTCAATGGTGAGATCAGAAGTTGTGGCATACATGATTTGTTGAGG
GACTTGAGCTTAAGAGAAGCTCAGAAAGAGAAGTTCCTGCACGTGACATCAACTCGATAT
GTTTCAAACTTCCTAGCACAGAGGAATGAGGGTCGTGGCTTCAGTTTTCTTTCCAACATT
TCTCTAAATGATTCTAGTGAGTTGTCATCTCATGTAACTCGATCGATGTTTTTCTGGGGT
AAACTGTTAATCTCTGCTCCGCCTCATAGGCAAATTTCCTTATTCGCGAGCTTCAAACAT
ATCAGAGTGTTGGCAATTTTTTCTCATATGTTTCCTGCATTTCCAGCTGAGATAACACAA
CTTACTCATCTAAGGTACCTTTGGATTCAATCAAATGGTGGTCTCCCCGCATCAGTGTCT
CATCTTTATAATCTGCAAACCTTGGTATTTCAACAGCCGGAACTGTATTATATGCACAAA
ACTTTGGTTCTGCCTCGGGATATCTGGAACATGACACAGCTAAGGCGTCTGCGTCTACTG
AGTGGCAATTATCTGTCTAAGCCTAAAAGAAGTACCACAACAGATGATGTTTTGGGGCTC
AGCAATCTGGAGGAACTTTCTCACTTATGTTTTTCTAGCTGTACAGAGGAAGTCTTTTCA
TGCCTTCCCAATATACGAAAACTGAGTATCCTCGATGCTGCATCAGACGATGCATCTGAA
TACTTAAAAAATCTGGTACATTTAGAGAAACTTGAAACATTGAAATGCATCTGCTATGGC
CAGAAGCGGCTCACCTTGTCAAACTGGTGCGCTTCCCTAACATCTGTTAAGAGGTTAGTA
TTATCCGGTTGTCTTCTGCTTTCTGAAGACATGGCAAGTCTAGCTGCATTGCCCAATCTT
GAAGTGCTTAAACTTAGAGATAATGAGTTTGAAGGTTGTGCGTGGACACTAAGTGATGAA
GACGAGTTTAGCCAGCTAAAGTTCCTACTGCTTTCTGAGCCACGTCTAGTGAACTGGGAA
GCTGGTAGTGTTAACTTCCCAAACCTTCAAAAGTTAGTTTTGAGGAAATGCATCCGTCTT
GAGGAAATACCTCTCGATATTGGAGAGATATGTACATTGGAGATGATTGAACTGATTTGC
TGTAGCTCTTCTGCTCAGAATTCAGCAAATGAAATTCGCGAAGAACAAGAGAGCATGGGA
AATTCTTGTCTTGACATACGCGTTTATGCTGATGATGATGAATCTTCCTCATTGTTTGAC
TTCTGGAGAGCAGTGATGAGCTATGTGAAGAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012049
PEP Infomation

pacid=37440447 transcript=PGSC0003DMT400017539 locus=PGSC0003DMG400006800 ID=PGSC0003DMT400017539.v4.03 annot-version=v4.03
Sequence

MGGIGKTTLAKKAYDYPRVRSRFDVHAWVTVSREYGMRRLLLSLVRCIPGMTTDKLVEKT
EDQLAESLYRKLKDRRYLIVIDDIWSTKVWDDVTRCFPDDDNGSRIILTSRLKDVAAYAN
PDSPLHEMGVLSLDDSWKLLSIKVFGVNDLCPSELEDIGKQIAERCGGLPLAILVVAGHL
SKISRRRESWIIVAKTVNSVVANDPDKCLGVLGMSYNYLSNHLKPCFLSMGAFPEDFEIK
ARTLIQVWVAEGFLKAERVKSLEKVAEECLEDLISRNLIMIRKRRFNGEIRSCGIHDLLR
DLSLREAQKEKFLHVTSTRYVSNFLAQRNEGRGFSFLSNISLNDSSELSSHVTRSMFFWG
KLLISAPPHRQISLFASFKHIRVLAIFSHMFPAFPAEITQLTHLRYLWIQSNGGLPASVS
HLYNLQTLVFQQPELYYMHKTLVLPRDIWNMTQLRRLRLLSGNYLSKPKRSTTTDDVLGL
SNLEELSHLCFSSCTEEVFSCLPNIRKLSILDAASDDASEYLKNLVHLEKLETLKCICYG
QKRLTLSNWCASLTSVKRLVLSGCLLLSEDMASLAALPNLEVLKLRDNEFEGCAWTLSDE
DEFSQLKFLLLSEPRLVNWEAGSVNFPNLQKLVLRKCIRLEEIPLDIGEICTLEMIELIC
CSSSAQNSANEIREEQESMGNSCLDIRVYADDDESSSLFDFWRAVMSYVKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400017539
Transcript Infomation

pacid=37440447 locus=PGSC0003DMG400006800 ID=PGSC0003DMT400017539.v4.03 annot-version=v4.03
Sequence

ATGGGTGGGATTGGCAAAACGACACTCGCTAAAAAAGCTTATGATTATCCTCGAGTTAGG
TCTCGCTTTGATGTTCATGCATGGGTTACTGTATCTCGAGAGTATGGAATGAGGAGGTTG
CTGTTAAGTCTAGTCCGTTGCATTCCAGGTATGACGACAGATAAGCTTGTAGAGAAAACT
GAGGATCAGTTAGCGGAGTCATTATATAGAAAACTTAAGGATCGAAGATATCTTATTGTC
ATTGATGATATTTGGAGTACTAAAGTTTGGGACGATGTAACAAGATGTTTTCCAGATGAT
GACAATGGGAGTCGAATCATATTAACGAGTAGGCTCAAGGATGTGGCTGCTTATGCTAAT
CCTGATAGCCCTTTGCATGAGATGGGGGTCTTAAGTTTAGATGATAGTTGGAAATTACTC
TCCATTAAGGTATTTGGGGTAAATGATCTTTGTCCTTCTGAGTTAGAGGATATCGGGAAG
CAAATAGCGGAAAGATGTGGTGGACTTCCTTTGGCAATTCTGGTGGTTGCAGGGCATCTT
TCTAAGATTTCTAGGAGAAGAGAAAGTTGGATCATTGTTGCCAAGACTGTTAATTCAGTT
GTTGCGAACGATCCTGATAAATGCCTAGGAGTGCTCGGTATGAGTTACAATTACCTGTCG
AACCACCTCAAGCCATGCTTCCTCTCTATGGGTGCTTTTCCGGAAGATTTTGAAATAAAA
GCTCGGACATTGATCCAAGTTTGGGTAGCTGAAGGGTTTCTAAAAGCAGAAAGGGTCAAG
AGCTTGGAAAAAGTTGCAGAAGAGTGTTTGGAGGATCTTATTAGTAGAAATCTAATAATG
ATTAGAAAGAGGAGGTTCAATGGTGAGATCAGAAGTTGTGGCATACATGATTTGTTGAGG
GACTTGAGCTTAAGAGAAGCTCAGAAAGAGAAGTTCCTGCACGTGACATCAACTCGATAT
GTTTCAAACTTCCTAGCACAGAGGAATGAGGGTCGTGGCTTCAGTTTTCTTTCCAACATT
TCTCTAAATGATTCTAGTGAGTTGTCATCTCATGTAACTCGATCGATGTTTTTCTGGGGT
AAACTGTTAATCTCTGCTCCGCCTCATAGGCAAATTTCCTTATTCGCGAGCTTCAAACAT
ATCAGAGTGTTGGCAATTTTTTCTCATATGTTTCCTGCATTTCCAGCTGAGATAACACAA
CTTACTCATCTAAGGTACCTTTGGATTCAATCAAATGGTGGTCTCCCCGCATCAGTGTCT
CATCTTTATAATCTGCAAACCTTGGTATTTCAACAGCCGGAACTGTATTATATGCACAAA
ACTTTGGTTCTGCCTCGGGATATCTGGAACATGACACAGCTAAGGCGTCTGCGTCTACTG
AGTGGCAATTATCTGTCTAAGCCTAAAAGAAGTACCACAACAGATGATGTTTTGGGGCTC
AGCAATCTGGAGGAACTTTCTCACTTATGTTTTTCTAGCTGTACAGAGGAAGTCTTTTCA
TGCCTTCCCAATATACGAAAACTGAGTATCCTCGATGCTGCATCAGACGATGCATCTGAA
TACTTAAAAAATCTGGTACATTTAGAGAAACTTGAAACATTGAAATGCATCTGCTATGGC
CAGAAGCGGCTCACCTTGTCAAACTGGTGCGCTTCCCTAACATCTGTTAAGAGGTTAGTA
TTATCCGGTTGTCTTCTGCTTTCTGAAGACATGGCAAGTCTAGCTGCATTGCCCAATCTT
GAAGTGCTTAAACTTAGAGATAATGAGTTTGAAGGTTGTGCGTGGACACTAAGTGATGAA
GACGAGTTTAGCCAGCTAAAGTTCCTACTGCTTTCTGAGCCACGTCTAGTGAACTGGGAA
GCTGGTAGTGTTAACTTCCCAAACCTTCAAAAGTTAGTTTTGAGGAAATGCATCCGTCTT
GAGGAAATACCTCTCGATATTGGAGAGATATGTACATTGGAGATGATTGAACTGATTTGC
TGTAGCTCTTCTGCTCAGAATTCAGCAAATGAAATTCGCGAAGAACAAGAGAGCATGGGA
AATTCTTGTCTTGACATACGCGTTTATGCTGATGATGATGAATCTTCCTCATTGTTTGAC
TTCTGGAGAGCAGTGATGAGCTATGTGAAGAAGTAG