Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017489
CDS Infomation

pacid=37439546 polypeptide=PGSC0003DMP400012019 locus=PGSC0003DMG400006793 ID=PGSC0003DMT400017489.v4.03 annot-version=v4.03
Sequence

ATGGCAACCAAAAAGCTCCCGTTACAATCAAGTAGCAACGCCAACATTTCAAATGCAAAC
GGAAAAACCATTGAACAAACCTACCAGAAGAAGACCCAGCTTGAACACATCCTTCTCCGT
CCAGATACTTACATCGGATCTGTTGAAAAACACACTCAAACTCTATGGGTATGGGAGAAT
GACGCCATGGTTCATCGCCCAGTCACTTACGTGCCTGGTCTGTACAAGATCTTCGACGAG
ATCTTAGTCAATGCAGCTGATAATAAACAGAGAGATCCTAAAATGGACGCGCTGGAAGTG
GTGATAGATCCTGAACAGAATTTAGTTAGTGTTTATAACAACGGTGATGGTATTCCTGTC
GAGATCCATCAGGAGGAAGGTGTGTATGTGCCGGAATTGATTTTTGGGCATTTGTTGACT
AGTAGTAACTATGATGATGCTGAGAAGAAAACCACTGGTGGAAGAAATGGATATGGCGCT
AAGCTTACGAATATCTTTTCTACTGAATTTATCATTGAAACTGCTGATGGAAAGCGGCAG
AAGAAGTATAAGCAGGTTTTCTCTAACAACATGGGAAAGAAGGGTGAACCAATTATAACT
AAATGCAAAGCAAGTGAGAATTGGACAAAAGTTTCATTTAAGCCAGACCTGGCAAAGTTT
AACATGGAAGAGCTCGAAGCAGATGTAGTTGCACTAATGAGAAAGAGAGTAATTGATTTG
GGTGGATGCCTTGGAAAGACTGTGAAGGTGAAACTCAATGAACAGCGCATTCCCGTCAAA
TCATTTGAAGAGTATTGCAAGCTTTTCTTAGATTCTAATGATGTGAAAAGGGAGTTCCTA
AAAGTTAATGACGCAAACGGAGTATTAAGGTGGGAGATATGTGTAAGTCTGAGTGAAGGA
CAATTTCAACAGGTCAGTTTTGTGAACAGCATTGCGACTATTAAGGGTGGAACTCACGTT
GATTATGTGGCCAACCAAATAGCAAACCACATAATGGGTGTAGTGAACAGGAAGAACAAA
AATGCTAACATCAAAGCCCACGCAGTGAAGAACCATTTATGGATGTTTGTTAATGCTCTC
ATTGACAATCCTGCGTTTGATTCACAAACTAAAGAAACCTTGACCCTGCGTCAGAGCAGT
TTCGGTTCAAAATGTGAACTTCAACCAGATTTTCTGAAGAAAGTTGAGAAGAATATTGGC
ATTGTCGACTCTCTTCTCTCCTGGGCAGACTTTAAAAATAGCAAAGACCTTAAGAAGACT
GATGGAAAAAAATCTGATAAGGTCAAGGTGGAAAAGCTAGAAGATGCTAATGATGCAGGA
GGGAGGAATTCTGATAAATGCACATTGATTTTGACTGAAGGAGACTCAGCCAAGGCTCTA
GCTATGGCTGGAATATCTGTTGTTGGGAGAGATCACTATGGTGTGTTCCCTTTGAGGGGT
AAGCTGCTAAATGTAAGGGAAGCAAGTCATAAACAGGTTTCAGAAAATAAAGAAATTGAA
TCTATCAAGAAGATTCTTGGACTTCAGACAGGCAAAGAATATGAGAGTGTCAAATCACTC
AGATATGGTCATTTAATGATTATGACTGATCAGGATCATGATGGTTCGCATATCAAGGGT
CTCTTAATTAATTTCATCCACACTTTTTGGCCGTCCTTGCTGAAAGTTCCATCTTTCTTA
GTGGAGTTTATCACACCAATTGTGAAGGCTACTCATAAAAGTGGGAGGATACTGGCATTT
TATACCATGCCTGAGTATGAGGCATGGAGAAGGAGTTTGGGTGCTACTTCAAGTGGTTGG
TCTATCAAGTACTATAAGGGGTTGGGAACAAGTACTTCAAAGGAAGGAAAAGAGTACTTC
CAAGATCTTCAGAAACACAGGAAAGATTTTATCTGGGCAGATAACCAAGATGGGGAATCA
ATAGAACTTGCTTTCAGTAAGAAGAAGATAGAAGCAAGGAAGAATTGGCTTAGACAATTT
GAGCCCGGTACCCATCTAGACCAGAAAGAAAAGTACATCTCATACACCGAATTTGTTAAC
AAAGAGCTTATTCTGTTTTCAATGGCTGACCTTCAAAGGTCTATTCCTTCAATGCTTGAT
GGTTTGAAACCGGGTCAAAGGAAGATTCTGTTCTGTGCATTTAAGAGGAATTTTGTTAAG
GAAGCAAAAGTTTCCCAATTTTCTGGTTATGTCTCTGAGCACTCAGCTTATCATCATGGT
GAGCAGAGTCTTAGCAGCACCATCATTGGCATGGCACAAGACTATGTTGGCAGCAATAAT
GTAAATCTATTGCAACCAAATGGTCAATTTGGCACTCGAAATATGGGAGGCAAAGATCAT
GCAAGTTCTAGGTACATTTACACTAGGCTTTCACCAATCGCAAGATTTCTGTTTCCTAAG
GATGATGATACCGTTCTTGATTACTTGAATGAAGATGGGCAGTCTATTGAACCTACTTGG
TACATACCTATCATTCCAATGGTACTTGTGAATGGAAGTGAAGGTATAGGAACAGGTTGG
AGTTCATACGTTCCTAATTATAATCCAAGGGACCTTGTTGCTAATGTAAGGCGTTTACTG
AATGATGAGCTAATGGAGCCAATGGATCCATGGTATAAAGGTTTCAAAGGGACAATAGAG
AAAACAGCAACAAAAGAAACTGGAGCAACGTACACTGTCACTGGTATTATAGAAGAGTTC
AGCGAAACGACTCTTAGGATTTCTGAGTTGCCAGTTCGGAGGTGGACAGAGGACTATAAG
CAGTTTTTGGAATCCATGACAGTCTCAACTGACAAGTCCAAGGATGCTTTCATAAAGGAA
GTCAGAGCGTATGGTGATGAGAACTCTGTATGTTTTGAAGTGATCATGTCTGAGGAGAAT
CTGCTATTGGCCCAGCAAGAGGGTTTGCTGAAAAAATTTAAGCTGACGACTACAATAAGT
ACCAGCAATATGCACCTTTTCGACTCCAAGGGGAAAATCAAGAAATATGATGCCCCAGAA
GAGATTCTTGAGGAGTTCTACCATGTACGACTCGAGTATTATGAGAAAAGAAAGAAAACT
CTATTGGAGATTCTCGAATTGGAGTTGCTGAGAATTGAGAACAAGGTGAGATTCATCCTT
GGAGTTGTGAAAGGCGAAATCATTGTGAACAACAGGAAGAGAGCTGATCTCTTGCTTGAA
TTGAAGAACAAAGGATTTACTCCTTTCCCCAAGAAAAAGCCAGTTGAAGCTGTTGTTGCA
GACTCAACTGATGATGCAGAAGATAGCGAAGAGAGTCCAGAGGAGTCAAATAAGGGAGTT
AGGGCAAGTGATTATGACTACTTGCTGTCGATGGCAATAGGAACATTGACTCTTGAGAAG
GTTCAAGAACTGTGTGCTGACAGGGATAAACTGAATGCTGAAGTTGAAGATATGAGAAAT
GCAACTCCAAAGGATTTATGGATGAAAGATCTTGATGTCCTTGACAAACAGCTTGATGAA
CAAGATAAACTTGATATCCAAACTGAGGAAGCTAGAGAGAAGCTAAAGAAGAAGGTGATG
AATGCAGCTGGAAAAGCACCTAAGCCTAAACCCCGAAAAACTACTAAGAAGGCTGCTGTA
GTAGAGTCTACTGCTGAACCAATGGATGTGTCGGTTGGTTCTATGGCGGAAACAGCCAAT
GTTACTGAGGTTGCGAAGCCAAAAGGCAGAGGAGGAGGTTCAAAGAAAGCTCCTGCAAAG
CAGGCAAAACCTGTAGTTGTAGAAGATGAAGAAGAAGAGGATGAAGTGCTAGCGTTGAAA
GATAGACTTGCAGCTTACAACCTTAACTCTTCTCCAGATCGATCAGAAGTCACGGAGACT
GAAGCGCCAAAAGCTCAGACGAAAGCACCTGCTAAAAGAGCTGCTGCACAAAAGAAGGCT
CTGCCATCCACTCCAGATGTTTCTGAAGGTGAGGATGAGATTGAAATTAGTGATGATAAT
GAGTTTGCGCCAGAAGTAGCTGTGGGAGGGAAAAAGAAAGGTGGGAGGAAACCAGCAGCT
GCAAAGGCAGCAGCAGCACCTAAACCCCCTAAGAAGAGAGCACCAGCTAATAAGCAATCA
CAAAGTGTTGGTCAGAGACTCATAACTCAAGTTCTGAAGCCTGCAGAGGATGCTGGTGTC
TCACCTGATCGAAAAGTGAGGAAAATGAGGGAATCTCCATTTAACAAAAAAAGTGGAGCT
GTTATGGGAAGGAACACAAGTAGTAGTAGTAGTACTTCACATGAAAGTGAAGTAAGTCCT
CCTATTCCTTCCCTGGGCAGTCTAGAGGAGGAAGTCAGTGAAGTTGTTGTCGCTCCAAAA
GCTAGACCACAAAGGGCGAATCGAACGAAGACGACATATGTTATCAGTGATTCTGATTCT
GAAGAGGATAACGATGATATTGAACTTTCTGATGATGATGTTGAACTTTCTGATACTGAT
TCTGATGGAGATTCGGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012019
PEP Infomation

pacid=37439546 transcript=PGSC0003DMT400017489 locus=PGSC0003DMG400006793 ID=PGSC0003DMT400017489.v4.03 annot-version=v4.03
Sequence

MATKKLPLQSSSNANISNANGKTIEQTYQKKTQLEHILLRPDTYIGSVEKHTQTLWVWEN
DAMVHRPVTYVPGLYKIFDEILVNAADNKQRDPKMDALEVVIDPEQNLVSVYNNGDGIPV
EIHQEEGVYVPELIFGHLLTSSNYDDAEKKTTGGRNGYGAKLTNIFSTEFIIETADGKRQ
KKYKQVFSNNMGKKGEPIITKCKASENWTKVSFKPDLAKFNMEELEADVVALMRKRVIDL
GGCLGKTVKVKLNEQRIPVKSFEEYCKLFLDSNDVKREFLKVNDANGVLRWEICVSLSEG
QFQQVSFVNSIATIKGGTHVDYVANQIANHIMGVVNRKNKNANIKAHAVKNHLWMFVNAL
IDNPAFDSQTKETLTLRQSSFGSKCELQPDFLKKVEKNIGIVDSLLSWADFKNSKDLKKT
DGKKSDKVKVEKLEDANDAGGRNSDKCTLILTEGDSAKALAMAGISVVGRDHYGVFPLRG
KLLNVREASHKQVSENKEIESIKKILGLQTGKEYESVKSLRYGHLMIMTDQDHDGSHIKG
LLINFIHTFWPSLLKVPSFLVEFITPIVKATHKSGRILAFYTMPEYEAWRRSLGATSSGW
SIKYYKGLGTSTSKEGKEYFQDLQKHRKDFIWADNQDGESIELAFSKKKIEARKNWLRQF
EPGTHLDQKEKYISYTEFVNKELILFSMADLQRSIPSMLDGLKPGQRKILFCAFKRNFVK
EAKVSQFSGYVSEHSAYHHGEQSLSSTIIGMAQDYVGSNNVNLLQPNGQFGTRNMGGKDH
ASSRYIYTRLSPIARFLFPKDDDTVLDYLNEDGQSIEPTWYIPIIPMVLVNGSEGIGTGW
SSYVPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGTIEKTATKETGATYTVTGIIEEF
SETTLRISELPVRRWTEDYKQFLESMTVSTDKSKDAFIKEVRAYGDENSVCFEVIMSEEN
LLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEILEEFYHVRLEYYEKRKKT
LLEILELELLRIENKVRFILGVVKGEIIVNNRKRADLLLELKNKGFTPFPKKKPVEAVVA
DSTDDAEDSEESPEESNKGVRASDYDYLLSMAIGTLTLEKVQELCADRDKLNAEVEDMRN
ATPKDLWMKDLDVLDKQLDEQDKLDIQTEEAREKLKKKVMNAAGKAPKPKPRKTTKKAAV
VESTAEPMDVSVGSMAETANVTEVAKPKGRGGGSKKAPAKQAKPVVVEDEEEEDEVLALK
DRLAAYNLNSSPDRSEVTETEAPKAQTKAPAKRAAAQKKALPSTPDVSEGEDEIEISDDN
EFAPEVAVGGKKKGGRKPAAAKAAAAPKPPKKRAPANKQSQSVGQRLITQVLKPAEDAGV
SPDRKVRKMRESPFNKKSGAVMGRNTSSSSSTSHESEVSPPIPSLGSLEEEVSEVVVAPK
ARPQRANRTKTTYVISDSDSEEDNDDIELSDDDVELSDTDSDGDSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400017489
Transcript Infomation

pacid=37439546 locus=PGSC0003DMG400006793 ID=PGSC0003DMT400017489.v4.03 annot-version=v4.03
Sequence

ATGGCAACCAAAAAGCTCCCGTTACAATCAAGTAGCAACGCCAACATTTCAAATGCAAAC
GGAAAAACCATTGAACAAACCTACCAGAAGAAGACCCAGCTTGAACACATCCTTCTCCGT
CCAGATACTTACATCGGATCTGTTGAAAAACACACTCAAACTCTATGGGTATGGGAGAAT
GACGCCATGGTTCATCGCCCAGTCACTTACGTGCCTGGTCTGTACAAGATCTTCGACGAG
ATCTTAGTCAATGCAGCTGATAATAAACAGAGAGATCCTAAAATGGACGCGCTGGAAGTG
GTGATAGATCCTGAACAGAATTTAGTTAGTGTTTATAACAACGGTGATGGTATTCCTGTC
GAGATCCATCAGGAGGAAGGTGTGTATGTGCCGGAATTGATTTTTGGGCATTTGTTGACT
AGTAGTAACTATGATGATGCTGAGAAGAAAACCACTGGTGGAAGAAATGGATATGGCGCT
AAGCTTACGAATATCTTTTCTACTGAATTTATCATTGAAACTGCTGATGGAAAGCGGCAG
AAGAAGTATAAGCAGGTTTTCTCTAACAACATGGGAAAGAAGGGTGAACCAATTATAACT
AAATGCAAAGCAAGTGAGAATTGGACAAAAGTTTCATTTAAGCCAGACCTGGCAAAGTTT
AACATGGAAGAGCTCGAAGCAGATGTAGTTGCACTAATGAGAAAGAGAGTAATTGATTTG
GGTGGATGCCTTGGAAAGACTGTGAAGGTGAAACTCAATGAACAGCGCATTCCCGTCAAA
TCATTTGAAGAGTATTGCAAGCTTTTCTTAGATTCTAATGATGTGAAAAGGGAGTTCCTA
AAAGTTAATGACGCAAACGGAGTATTAAGGTGGGAGATATGTGTAAGTCTGAGTGAAGGA
CAATTTCAACAGGTCAGTTTTGTGAACAGCATTGCGACTATTAAGGGTGGAACTCACGTT
GATTATGTGGCCAACCAAATAGCAAACCACATAATGGGTGTAGTGAACAGGAAGAACAAA
AATGCTAACATCAAAGCCCACGCAGTGAAGAACCATTTATGGATGTTTGTTAATGCTCTC
ATTGACAATCCTGCGTTTGATTCACAAACTAAAGAAACCTTGACCCTGCGTCAGAGCAGT
TTCGGTTCAAAATGTGAACTTCAACCAGATTTTCTGAAGAAAGTTGAGAAGAATATTGGC
ATTGTCGACTCTCTTCTCTCCTGGGCAGACTTTAAAAATAGCAAAGACCTTAAGAAGACT
GATGGAAAAAAATCTGATAAGGTCAAGGTGGAAAAGCTAGAAGATGCTAATGATGCAGGA
GGGAGGAATTCTGATAAATGCACATTGATTTTGACTGAAGGAGACTCAGCCAAGGCTCTA
GCTATGGCTGGAATATCTGTTGTTGGGAGAGATCACTATGGTGTGTTCCCTTTGAGGGGT
AAGCTGCTAAATGTAAGGGAAGCAAGTCATAAACAGGTTTCAGAAAATAAAGAAATTGAA
TCTATCAAGAAGATTCTTGGACTTCAGACAGGCAAAGAATATGAGAGTGTCAAATCACTC
AGATATGGTCATTTAATGATTATGACTGATCAGGATCATGATGGTTCGCATATCAAGGGT
CTCTTAATTAATTTCATCCACACTTTTTGGCCGTCCTTGCTGAAAGTTCCATCTTTCTTA
GTGGAGTTTATCACACCAATTGTGAAGGCTACTCATAAAAGTGGGAGGATACTGGCATTT
TATACCATGCCTGAGTATGAGGCATGGAGAAGGAGTTTGGGTGCTACTTCAAGTGGTTGG
TCTATCAAGTACTATAAGGGGTTGGGAACAAGTACTTCAAAGGAAGGAAAAGAGTACTTC
CAAGATCTTCAGAAACACAGGAAAGATTTTATCTGGGCAGATAACCAAGATGGGGAATCA
ATAGAACTTGCTTTCAGTAAGAAGAAGATAGAAGCAAGGAAGAATTGGCTTAGACAATTT
GAGCCCGGTACCCATCTAGACCAGAAAGAAAAGTACATCTCATACACCGAATTTGTTAAC
AAAGAGCTTATTCTGTTTTCAATGGCTGACCTTCAAAGGTCTATTCCTTCAATGCTTGAT
GGTTTGAAACCGGGTCAAAGGAAGATTCTGTTCTGTGCATTTAAGAGGAATTTTGTTAAG
GAAGCAAAAGTTTCCCAATTTTCTGGTTATGTCTCTGAGCACTCAGCTTATCATCATGGT
GAGCAGAGTCTTAGCAGCACCATCATTGGCATGGCACAAGACTATGTTGGCAGCAATAAT
GTAAATCTATTGCAACCAAATGGTCAATTTGGCACTCGAAATATGGGAGGCAAAGATCAT
GCAAGTTCTAGGTACATTTACACTAGGCTTTCACCAATCGCAAGATTTCTGTTTCCTAAG
GATGATGATACCGTTCTTGATTACTTGAATGAAGATGGGCAGTCTATTGAACCTACTTGG
TACATACCTATCATTCCAATGGTACTTGTGAATGGAAGTGAAGGTATAGGAACAGGTTGG
AGTTCATACGTTCCTAATTATAATCCAAGGGACCTTGTTGCTAATGTAAGGCGTTTACTG
AATGATGAGCTAATGGAGCCAATGGATCCATGGTATAAAGGTTTCAAAGGGACAATAGAG
AAAACAGCAACAAAAGAAACTGGAGCAACGTACACTGTCACTGGTATTATAGAAGAGTTC
AGCGAAACGACTCTTAGGATTTCTGAGTTGCCAGTTCGGAGGTGGACAGAGGACTATAAG
CAGTTTTTGGAATCCATGACAGTCTCAACTGACAAGTCCAAGGATGCTTTCATAAAGGAA
GTCAGAGCGTATGGTGATGAGAACTCTGTATGTTTTGAAGTGATCATGTCTGAGGAGAAT
CTGCTATTGGCCCAGCAAGAGGGTTTGCTGAAAAAATTTAAGCTGACGACTACAATAAGT
ACCAGCAATATGCACCTTTTCGACTCCAAGGGGAAAATCAAGAAATATGATGCCCCAGAA
GAGATTCTTGAGGAGTTCTACCATGTACGACTCGAGTATTATGAGAAAAGAAAGAAAACT
CTATTGGAGATTCTCGAATTGGAGTTGCTGAGAATTGAGAACAAGGTGAGATTCATCCTT
GGAGTTGTGAAAGGCGAAATCATTGTGAACAACAGGAAGAGAGCTGATCTCTTGCTTGAA
TTGAAGAACAAAGGATTTACTCCTTTCCCCAAGAAAAAGCCAGTTGAAGCTGTTGTTGCA
GACTCAACTGATGATGCAGAAGATAGCGAAGAGAGTCCAGAGGAGTCAAATAAGGGAGTT
AGGGCAAGTGATTATGACTACTTGCTGTCGATGGCAATAGGAACATTGACTCTTGAGAAG
GTTCAAGAACTGTGTGCTGACAGGGATAAACTGAATGCTGAAGTTGAAGATATGAGAAAT
GCAACTCCAAAGGATTTATGGATGAAAGATCTTGATGTCCTTGACAAACAGCTTGATGAA
CAAGATAAACTTGATATCCAAACTGAGGAAGCTAGAGAGAAGCTAAAGAAGAAGGTGATG
AATGCAGCTGGAAAAGCACCTAAGCCTAAACCCCGAAAAACTACTAAGAAGGCTGCTGTA
GTAGAGTCTACTGCTGAACCAATGGATGTGTCGGTTGGTTCTATGGCGGAAACAGCCAAT
GTTACTGAGGTTGCGAAGCCAAAAGGCAGAGGAGGAGGTTCAAAGAAAGCTCCTGCAAAG
CAGGCAAAACCTGTAGTTGTAGAAGATGAAGAAGAAGAGGATGAAGTGCTAGCGTTGAAA
GATAGACTTGCAGCTTACAACCTTAACTCTTCTCCAGATCGATCAGAAGTCACGGAGACT
GAAGCGCCAAAAGCTCAGACGAAAGCACCTGCTAAAAGAGCTGCTGCACAAAAGAAGGCT
CTGCCATCCACTCCAGATGTTTCTGAAGGTGAGGATGAGATTGAAATTAGTGATGATAAT
GAGTTTGCGCCAGAAGTAGCTGTGGGAGGGAAAAAGAAAGGTGGGAGGAAACCAGCAGCT
GCAAAGGCAGCAGCAGCACCTAAACCCCCTAAGAAGAGAGCACCAGCTAATAAGCAATCA
CAAAGTGTTGGTCAGAGACTCATAACTCAAGTTCTGAAGCCTGCAGAGGATGCTGGTGTC
TCACCTGATCGAAAAGTGAGGAAAATGAGGGAATCTCCATTTAACAAAAAAAGTGGAGCT
GTTATGGGAAGGAACACAAGTAGTAGTAGTAGTACTTCACATGAAAGTGAAGTAAGTCCT
CCTATTCCTTCCCTGGGCAGTCTAGAGGAGGAAGTCAGTGAAGTTGTTGTCGCTCCAAAA
GCTAGACCACAAAGGGCGAATCGAACGAAGACGACATATGTTATCAGTGATTCTGATTCT
GAAGAGGATAACGATGATATTGAACTTTCTGATGATGATGTTGAACTTTCTGATACTGAT
TCTGATGGAGATTCGGAGTAG