Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017462
CDS Infomation

pacid=37441216 polypeptide=PGSC0003DMP400012000 locus=PGSC0003DMG400006785 ID=PGSC0003DMT400017462.v4.03 annot-version=v4.03
Sequence

ATGACAGAAATCCTATACACTCTTGCAGCTGAAATCTTGATGAAGTTGGGTTCCCTAGCA
GCCCATGAGCTTGGATCATTATGGGGCCTTAAAGATGATCTTTCCAAGCTCAGAGATACA
GTTTCTGCCATGGAAGCAGTATTTCTTGACGTAGAGGAGAAGCAAGGGGATAGCCGTGAG
GTCAAAAATTGGGTCCGGAAGCTCAGAGCTGTGTTTTTCGAGGCTGATGACTTGTTGGAT
GACTTCTACACAGAGATTACTCGGCGTAATTTGCTGATGCAGAAAAACCCATCAAAGAAA
ATTTCTATTTTCTTCTCGAAATCAAATCCTGTTCTGTATAGTCTTGAGATCCATCAGCGT
CTCAAGGTTATTAGAAGGAAACTTGAAGCAATTGAGAAAGACAAGCATATGTTGCACCTT
GTTGAAAAGCAAGTAGTTGATTTTGAGCTTCCAGATAGGGAGACTCATTCCTTTGTGAAT
GTTGACGAAGTAATCGGAAGGGAAGATGAGAAAAGGGTAACCGTCGATCGTCTACTAGAT
GTTCGAGAAAATGTTTGTGTGGTTCCTATAATTGGTATTGGGGGACTTGGCAAAACAACA
CTTGCACAACTTGTTTATAACGAGGACAGGGTTAAGAAACATTTTGATCTGAGAATTTGG
GTGTTCGTTTCGCATATTTTTAATGTGAAACTCATTGTGGAAAAGATGATAGAATCTATC
ACTGGTATGAAACCTCAAAGCCTCCATTTTGACAGGTTGCAAGACCAACTTAGAAAGGAA
ATTGATGGTAAGAAGTACCTCCTTGTTTTGGATGATATGTGGAATGAAAATCGCGAAATT
TGGTTGAAATTGCAGGATCTTTTGATTGGTGGTGCTAGAGGAAGTAAAGTATTGGTGACC
ACTCGATCAGGACTAGTTGCAGCAGCTATGGGTACTGCTCCACCATGTAATCTAAAAGGT
CTGCCTGAAGACATGTCTTGGTCCCTGTTTAGTAAATTAGCATTTAAGCCCGGCGAAGAA
ATAAATTCATCTCTAGTGGCAATTGGAAAGGAAATACTGAGAAAATGTGCTGGTGTTCCT
TTGGCAATAAGGATCTTAGGGAGCTTTTTGTATTATAAAGAGACTGAAGCTGAATGGTTG
TATGTCAAAAATCATCAACTCACAGACATGGCGGAAAGTGCAGACATTGAAATTTTGCCA
ATTCTAAAGTTGAGTTATGATAATCTTCCTATACACTTGAAGCATTGTTTCAGTTATTGT
TCAATATTCCAAAAGAATCAGACCATTAGCAAGAAAACCTTGATTCAGTTATGGATAGCC
CAAGGTTTTATCAGATCAAATGATGAGGAAAATGAATGTCAAGAGGATGTTGGAGAACGT
TACTTCATGGGTTTGCTGAGAAGGTCCTTTTTTCAGGATGTTAAAGAGCATAGGTTGGGC
GATATCATCAGCTGCAAAATGCATGATCTGATTCATGACCTAGCAAAAATGGTTGCAGAG
AATGAGACTTTGATGCTAACTTCTGCAGGAAATAAATCTAGTGTTAATATTTGCCATTTG
TCAGTTGGTCCTGTTCACGATTCAGCATGGGAGCTCCCTCACTCCTTGCTCAAAGAAAAA
AATTTACGCACGTTTTTAATGCCAATTGCATCAAGGGATTACCTGAAATCGGGAAGATTT
ATTGGGTCCGAGAAACAAAGTAAATCAGTTGTGGATGCAGTTATATCGAATTTCAGGAGC
CTAAGAGTATTGGATCTACATGGCTTGGGAATCAATGAAGTGCCAGGTTCTGTGAGCATG
TTGAAGCATCTAAGGTACATCGACCTATCTGAGAATAATTTTGTGACACTTCCAAAATCA
ATGAGCAAACTGCTGAATTTGCAAACTCTAAAGCTGTCTTATTGTTTTGACCTTTGTGAA
CTGCCAGAAAATATTCACAAAATGGTAAACATCCGACATCTAGAGCTTGATGGTTGTTTG
AATTTGTCCAAAATGCCATGTGGGATTGGACAATTAACTGCTCTTAGGACTTTATCGCAG
TTTGTGATAGGTCAAGAAACCTCTACGAGTTCTAAAGTCAATGCAGTGTTAACCGACTTG
AATGGTCTTGTCAAGCTAAGAGGAAAATTAACACTTAGAAATTTGGGCTGCATAGAGTGT
TTATGTCCTAAAATTAATGATGCTGTTTTGAAGAACAAGGAATACTTGCAATCACTGAGA
TTAGAATGGACATACGAAGCCGTCAATGATGAATATGATGAGCTGTTATTGGAAGGCCTT
CAGCCACATGAAAATTTGAAGGTACTTTTCATAGAAAGATACGGAGGTCAAAGTTTCCCA
AAATGGATGATGGTTGGCTTGCACTCATCACTACCAAAGTTAACAAAACTTACTCTGAAG
AATCTGAAAGTATGCAAAAGTCTTCCACCATTTGGGTGTCTTCCCTCTCTCCAATCCCTT
AAACTTGAAAATTTGACCTTGCTAGAGTACATTGAACATACTTCCTATGATGGATCTCAA
TTTGGAATGGAGCTACAAAAAGGATCTGCAATGTATTTTCCATCATTGAAAGAATTGAAA
CTCTGTAACTTGCCTTGCTTGAAAGGATGGTGGAAAAAAGAAGTAATGGCTGGTAGTGAA
TCATCGTCATTTCCTAACCGGCTCCTACTTTCATCATTTCCTTCACTCTCCAAGCTGACC
ATCCAAGATTGCCTTATGCTTGAGTTCATGCCAATTAATCCACGTCTCGAGGAATTGAAC
TTGATCAGAGTTGGCAATAAACTTTTGCAACAACTAATGATGCTTCTGGAAACAACATTG
TCTGCAAATTGTTCATCTTTCCTTGCTGTCTCAAAATTGAAATCATTGTACATTCTTGAT
GTGAGAGAGTTATTCCTTTTACCAGAGGGATTGCAAAATTTGAGTCGGCTTGACCACTTG
GAAATCAATGGTTGTCCTAACCTATTGAGTTTGCCAATAGAAGGAATGCGAGCGTTGAAT
ATGCTCCGGTTTCTGCATGTTCATGACTGTGGGTTAACTTCTTTATTTCAAGCTATAAAG
CATCTCTACGCTCTTGAAACACTAGTGATTAGCTCCTGCAAAGAGATGAATTTATCAACT
GACAATGATCAGGAATATCTGCAATTTGAAGGCCTAAAAAGCCTCCATACAGTATACATC
CAAGAGATACCGAAATTGGTTCATCTTCCAGTGTGGCTTCAGTATCTTCCTTCTTTGCGG
GCGTTGCATATAGAGAAGTGTTATAGTTTACTGGACCTACCTGACTGGATCAGTGATCTA
AAATCGCTTCATGCGCTTTTCATCTACAAGTGCCCAAAATTGACATCAATTCCTGCAGGA
ATGGTTCACCTTACTTCCCTTGAAGAACTCCGAATTCTCATGTGCCCTAATCTCTGGACA
TGCTGTCAAAACGAACAAGGAGAGGACTGGCCTAAAATAGCTCATATTCCAAAAGTTATT
GTGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012000
PEP Infomation

pacid=37441216 transcript=PGSC0003DMT400017462 locus=PGSC0003DMG400006785 ID=PGSC0003DMT400017462.v4.03 annot-version=v4.03
Sequence

MTEILYTLAAEILMKLGSLAAHELGSLWGLKDDLSKLRDTVSAMEAVFLDVEEKQGDSRE
VKNWVRKLRAVFFEADDLLDDFYTEITRRNLLMQKNPSKKISIFFSKSNPVLYSLEIHQR
LKVIRRKLEAIEKDKHMLHLVEKQVVDFELPDRETHSFVNVDEVIGREDEKRVTVDRLLD
VRENVCVVPIIGIGGLGKTTLAQLVYNEDRVKKHFDLRIWVFVSHIFNVKLIVEKMIESI
TGMKPQSLHFDRLQDQLRKEIDGKKYLLVLDDMWNENREIWLKLQDLLIGGARGSKVLVT
TRSGLVAAAMGTAPPCNLKGLPEDMSWSLFSKLAFKPGEEINSSLVAIGKEILRKCAGVP
LAIRILGSFLYYKETEAEWLYVKNHQLTDMAESADIEILPILKLSYDNLPIHLKHCFSYC
SIFQKNQTISKKTLIQLWIAQGFIRSNDEENECQEDVGERYFMGLLRRSFFQDVKEHRLG
DIISCKMHDLIHDLAKMVAENETLMLTSAGNKSSVNICHLSVGPVHDSAWELPHSLLKEK
NLRTFLMPIASRDYLKSGRFIGSEKQSKSVVDAVISNFRSLRVLDLHGLGINEVPGSVSM
LKHLRYIDLSENNFVTLPKSMSKLLNLQTLKLSYCFDLCELPENIHKMVNIRHLELDGCL
NLSKMPCGIGQLTALRTLSQFVIGQETSTSSKVNAVLTDLNGLVKLRGKLTLRNLGCIEC
LCPKINDAVLKNKEYLQSLRLEWTYEAVNDEYDELLLEGLQPHENLKVLFIERYGGQSFP
KWMMVGLHSSLPKLTKLTLKNLKVCKSLPPFGCLPSLQSLKLENLTLLEYIEHTSYDGSQ
FGMELQKGSAMYFPSLKELKLCNLPCLKGWWKKEVMAGSESSSFPNRLLLSSFPSLSKLT
IQDCLMLEFMPINPRLEELNLIRVGNKLLQQLMMLLETTLSANCSSFLAVSKLKSLYILD
VRELFLLPEGLQNLSRLDHLEINGCPNLLSLPIEGMRALNMLRFLHVHDCGLTSLFQAIK
HLYALETLVISSCKEMNLSTDNDQEYLQFEGLKSLHTVYIQEIPKLVHLPVWLQYLPSLR
ALHIEKCYSLLDLPDWISDLKSLHALFIYKCPKLTSIPAGMVHLTSLEELRILMCPNLWT
CCQNEQGEDWPKIAHIPKVIVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400017462
Transcript Infomation

pacid=37441216 locus=PGSC0003DMG400006785 ID=PGSC0003DMT400017462.v4.03 annot-version=v4.03
Sequence

ATGACAGAAATCCTATACACTCTTGCAGCTGAAATCTTGATGAAGTTGGGTTCCCTAGCA
GCCCATGAGCTTGGATCATTATGGGGCCTTAAAGATGATCTTTCCAAGCTCAGAGATACA
GTTTCTGCCATGGAAGCAGTATTTCTTGACGTAGAGGAGAAGCAAGGGGATAGCCGTGAG
GTCAAAAATTGGGTCCGGAAGCTCAGAGCTGTGTTTTTCGAGGCTGATGACTTGTTGGAT
GACTTCTACACAGAGATTACTCGGCGTAATTTGCTGATGCAGAAAAACCCATCAAAGAAA
ATTTCTATTTTCTTCTCGAAATCAAATCCTGTTCTGTATAGTCTTGAGATCCATCAGCGT
CTCAAGGTTATTAGAAGGAAACTTGAAGCAATTGAGAAAGACAAGCATATGTTGCACCTT
GTTGAAAAGCAAGTAGTTGATTTTGAGCTTCCAGATAGGGAGACTCATTCCTTTGTGAAT
GTTGACGAAGTAATCGGAAGGGAAGATGAGAAAAGGGTAACCGTCGATCGTCTACTAGAT
GTTCGAGAAAATGTTTGTGTGGTTCCTATAATTGGTATTGGGGGACTTGGCAAAACAACA
CTTGCACAACTTGTTTATAACGAGGACAGGGTTAAGAAACATTTTGATCTGAGAATTTGG
GTGTTCGTTTCGCATATTTTTAATGTGAAACTCATTGTGGAAAAGATGATAGAATCTATC
ACTGGTATGAAACCTCAAAGCCTCCATTTTGACAGGTTGCAAGACCAACTTAGAAAGGAA
ATTGATGGTAAGAAGTACCTCCTTGTTTTGGATGATATGTGGAATGAAAATCGCGAAATT
TGGTTGAAATTGCAGGATCTTTTGATTGGTGGTGCTAGAGGAAGTAAAGTATTGGTGACC
ACTCGATCAGGACTAGTTGCAGCAGCTATGGGTACTGCTCCACCATGTAATCTAAAAGGT
CTGCCTGAAGACATGTCTTGGTCCCTGTTTAGTAAATTAGCATTTAAGCCCGGCGAAGAA
ATAAATTCATCTCTAGTGGCAATTGGAAAGGAAATACTGAGAAAATGTGCTGGTGTTCCT
TTGGCAATAAGGATCTTAGGGAGCTTTTTGTATTATAAAGAGACTGAAGCTGAATGGTTG
TATGTCAAAAATCATCAACTCACAGACATGGCGGAAAGTGCAGACATTGAAATTTTGCCA
ATTCTAAAGTTGAGTTATGATAATCTTCCTATACACTTGAAGCATTGTTTCAGTTATTGT
TCAATATTCCAAAAGAATCAGACCATTAGCAAGAAAACCTTGATTCAGTTATGGATAGCC
CAAGGTTTTATCAGATCAAATGATGAGGAAAATGAATGTCAAGAGGATGTTGGAGAACGT
TACTTCATGGGTTTGCTGAGAAGGTCCTTTTTTCAGGATGTTAAAGAGCATAGGTTGGGC
GATATCATCAGCTGCAAAATGCATGATCTGATTCATGACCTAGCAAAAATGGTTGCAGAG
AATGAGACTTTGATGCTAACTTCTGCAGGAAATAAATCTAGTGTTAATATTTGCCATTTG
TCAGTTGGTCCTGTTCACGATTCAGCATGGGAGCTCCCTCACTCCTTGCTCAAAGAAAAA
AATTTACGCACGTTTTTAATGCCAATTGCATCAAGGGATTACCTGAAATCGGGAAGATTT
ATTGGGTCCGAGAAACAAAGTAAATCAGTTGTGGATGCAGTTATATCGAATTTCAGGAGC
CTAAGAGTATTGGATCTACATGGCTTGGGAATCAATGAAGTGCCAGGTTCTGTGAGCATG
TTGAAGCATCTAAGGTACATCGACCTATCTGAGAATAATTTTGTGACACTTCCAAAATCA
ATGAGCAAACTGCTGAATTTGCAAACTCTAAAGCTGTCTTATTGTTTTGACCTTTGTGAA
CTGCCAGAAAATATTCACAAAATGGTAAACATCCGACATCTAGAGCTTGATGGTTGTTTG
AATTTGTCCAAAATGCCATGTGGGATTGGACAATTAACTGCTCTTAGGACTTTATCGCAG
TTTGTGATAGGTCAAGAAACCTCTACGAGTTCTAAAGTCAATGCAGTGTTAACCGACTTG
AATGGTCTTGTCAAGCTAAGAGGAAAATTAACACTTAGAAATTTGGGCTGCATAGAGTGT
TTATGTCCTAAAATTAATGATGCTGTTTTGAAGAACAAGGAATACTTGCAATCACTGAGA
TTAGAATGGACATACGAAGCCGTCAATGATGAATATGATGAGCTGTTATTGGAAGGCCTT
CAGCCACATGAAAATTTGAAGGTACTTTTCATAGAAAGATACGGAGGTCAAAGTTTCCCA
AAATGGATGATGGTTGGCTTGCACTCATCACTACCAAAGTTAACAAAACTTACTCTGAAG
AATCTGAAAGTATGCAAAAGTCTTCCACCATTTGGGTGTCTTCCCTCTCTCCAATCCCTT
AAACTTGAAAATTTGACCTTGCTAGAGTACATTGAACATACTTCCTATGATGGATCTCAA
TTTGGAATGGAGCTACAAAAAGGATCTGCAATGTATTTTCCATCATTGAAAGAATTGAAA
CTCTGTAACTTGCCTTGCTTGAAAGGATGGTGGAAAAAAGAAGTAATGGCTGGTAGTGAA
TCATCGTCATTTCCTAACCGGCTCCTACTTTCATCATTTCCTTCACTCTCCAAGCTGACC
ATCCAAGATTGCCTTATGCTTGAGTTCATGCCAATTAATCCACGTCTCGAGGAATTGAAC
TTGATCAGAGTTGGCAATAAACTTTTGCAACAACTAATGATGCTTCTGGAAACAACATTG
TCTGCAAATTGTTCATCTTTCCTTGCTGTCTCAAAATTGAAATCATTGTACATTCTTGAT
GTGAGAGAGTTATTCCTTTTACCAGAGGGATTGCAAAATTTGAGTCGGCTTGACCACTTG
GAAATCAATGGTTGTCCTAACCTATTGAGTTTGCCAATAGAAGGAATGCGAGCGTTGAAT
ATGCTCCGGTTTCTGCATGTTCATGACTGTGGGTTAACTTCTTTATTTCAAGCTATAAAG
CATCTCTACGCTCTTGAAACACTAGTGATTAGCTCCTGCAAAGAGATGAATTTATCAACT
GACAATGATCAGGAATATCTGCAATTTGAAGGCCTAAAAAGCCTCCATACAGTATACATC
CAAGAGATACCGAAATTGGTTCATCTTCCAGTGTGGCTTCAGTATCTTCCTTCTTTGCGG
GCGTTGCATATAGAGAAGTGTTATAGTTTACTGGACCTACCTGACTGGATCAGTGATCTA
AAATCGCTTCATGCGCTTTTCATCTACAAGTGCCCAAAATTGACATCAATTCCTGCAGGA
ATGGTTCACCTTACTTCCCTTGAAGAACTCCGAATTCTCATGTGCCCTAATCTCTGGACA
TGCTGTCAAAACGAACAAGGAGAGGACTGGCCTAAAATAGCTCATATTCCAAAAGTTATT
GTGAAGTGA