Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017445
CDS Infomation

pacid=37440045 polypeptide=PGSC0003DMP400011986 locus=PGSC0003DMG400006778 ID=PGSC0003DMT400017445.v4.03 annot-version=v4.03
Sequence

ATGTGTGGAATATTTGCCTACTTGAATTACAATGTTACCAGAGAGAGAAGATACATCCTT
GAAGTTCTCTTTAATGGTTTGAGGCGTTTAGAGTATAGAGGCTATGATTCCGCTGGAATT
TCCATTGATTCTTCAAATCAAACTTCTGATCCTCCTCTTGTTTTTCGTCAAGAAGGAAAT
ATTGAATCGCTTGTCAAATCTGTATACCACGATGTTGCTGCTACAGATTTGAATCTCGAA
GAATCATTTTCTGTTCATGCTGGAATATCACACACCCGGTGGGCCACACATGGGGAGCCT
GCTCCTAAGAATAGTCATCCTCAAAGTTCTGGTGCTGGAAATGACTTTTTGGTTGTGCAC
AATGGTATTATCACCAATTATGAGGTATTGAAAGAGACCCTTCTCCGACATGGTTTCACC
TTTGAGTCTGAAACAGACACAGAAGTAATTCCGAAGCTTGCAAAATTTATCTTTGATAAA
GCTAATGAAGAAGGTGATCAGTGTGTGACATTCAGTCAAGTTGTGCTTGAGGTAATAAGG
CATCTAGAAGGAGCCTATGCTCTCACATTTAAAAGTCGACACTACCCAAATGAGTTGATT
GCTTGCAAACGTGGTAGTCCACTTCTTCTTGGTGTAAAAGACTTAGAAGAAAAGGCCTCA
TCAGGATCATCATTTAGTGATGCTAAATTTCCTTCAAGCAATGGACAACCAAAAGAATTA
TTCTTGTCCAGTGATGCCAATGCTTTGGTTGAACATACTAAAAAGGTCTTGGTAATTGAG
GATGGAGAAGTTGTTCACATCAAGGATGGAGGAGTGTCAATTTACAAATTTGACAAGGGT
AAGAATGGTGGTACTCTCAGTAGACCTGCTTCTGTTCAACGTGCCTTATCCATTTTGGAA
ATGGAGGTAGAACAGATAAACAAAGGAAAATATGAGCACTACATGCAAAAAGAAATCCAT
GAGCAGCCAGAATCTTTAACGACAACTATGCGAGGGAGACTTATACGTGCAGGATCATGT
AAAGCAAAGACTGTGCTTTTGGGGGGCCTGAAGGATCACCTCAAAACCATAAGAAGAAGC
AGGAGAATCGTTTTTGTTGGGTGTGGCACAAGTTACAATGCAGCTCTTGCTGCAAGATCC
ATTGTGGAAGAGCTTTCTGGTATTCCTGTAACCATGGAGATTGCCAGTGATTTAGTGGAC
AGACAAGGGCCAATATATCGAGAAGATACAGCTGTCTTCGTTAGTCAATCAGGAGAAACT
GCTGACACTTTGCTTGCATTAGAGTATGCTCTGGAAAATGGTGCATTATGTGTTGGCATT
ACAAATACTGTTGGTAGTGCAATTGCTAGGCACACTCACTGTGGTGTTCACATAAATGCG
GGCTGTGAGATAGGAGTTGCAAGTACTAAGGCATACACAAGCCAAATTGTTGTGATGGCC
ATGCTAGCTCTTGCAATCGGAGCTGATACACTCTCAAATCAAGCAAGAAGAGAAGCAATA
ATTGATGGTTTATTTTACTTGCCACGCAAAGTGAAAGCGGTGCTCAAGCTTGATGAAGAA
ATGAAGGATCTTGCTAAGCTGCTAATTGCTGAGCAATCACTTCTTGTTTTTGGAAGAGGT
TACAACTATGCATCAGCTCTTGAAGGTGCTTTGAAGGTAAAGGAGGTGGCACTCATGCAC
AGTGAAGGAATACTTGCTGGAGAGATGAAACATGGTCCCTTGGCTTTGGTTGATGAAAAT
CTCCCTATTGTAGTAATTGCCACCCGTGATTCTTGTTTTAGCAAACAACAGTCAGTCATT
CAACAACTTCATGCACGGAAAGGTCGACTGATAGTTATGTGCACAGAAGGAGATAAAGCA
TCTGTTTCTGTTGGTGGATCGTCTCGAGTAATTGAAGTTCCACAGGTTGTGGACTGTTTG
CAGCCCGTAATTAATGTAGTTCCATTACAGTTATTGGCCTATCATCTTACTGTACTGCGT
GGATACAATGTTGATCAACCTCGCAATCTTGCCAAGAGTGTCACAACGCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400011986
PEP Infomation

pacid=37440045 transcript=PGSC0003DMT400017445 locus=PGSC0003DMG400006778 ID=PGSC0003DMT400017445.v4.03 annot-version=v4.03
Sequence

MCGIFAYLNYNVTRERRYILEVLFNGLRRLEYRGYDSAGISIDSSNQTSDPPLVFRQEGN
IESLVKSVYHDVAATDLNLEESFSVHAGISHTRWATHGEPAPKNSHPQSSGAGNDFLVVH
NGIITNYEVLKETLLRHGFTFESETDTEVIPKLAKFIFDKANEEGDQCVTFSQVVLEVIR
HLEGAYALTFKSRHYPNELIACKRGSPLLLGVKDLEEKASSGSSFSDAKFPSSNGQPKEL
FLSSDANALVEHTKKVLVIEDGEVVHIKDGGVSIYKFDKGKNGGTLSRPASVQRALSILE
MEVEQINKGKYEHYMQKEIHEQPESLTTTMRGRLIRAGSCKAKTVLLGGLKDHLKTIRRS
RRIVFVGCGTSYNAALAARSIVEELSGIPVTMEIASDLVDRQGPIYREDTAVFVSQSGET
ADTLLALEYALENGALCVGITNTVGSAIARHTHCGVHINAGCEIGVASTKAYTSQIVVMA
MLALAIGADTLSNQARREAIIDGLFYLPRKVKAVLKLDEEMKDLAKLLIAEQSLLVFGRG
YNYASALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVIATRDSCFSKQQSVI
QQLHARKGRLIVMCTEGDKASVSVGGSSRVIEVPQVVDCLQPVINVVPLQLLAYHLTVLR
GYNVDQPRNLAKSVTTQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400017445
Transcript Infomation

pacid=37440045 locus=PGSC0003DMG400006778 ID=PGSC0003DMT400017445.v4.03 annot-version=v4.03
Sequence

ATGTGTGGAATATTTGCCTACTTGAATTACAATGTTACCAGAGAGAGAAGATACATCCTT
GAAGTTCTCTTTAATGGTTTGAGGCGTTTAGAGTATAGAGGCTATGATTCCGCTGGAATT
TCCATTGATTCTTCAAATCAAACTTCTGATCCTCCTCTTGTTTTTCGTCAAGAAGGAAAT
ATTGAATCGCTTGTCAAATCTGTATACCACGATGTTGCTGCTACAGATTTGAATCTCGAA
GAATCATTTTCTGTTCATGCTGGAATATCACACACCCGGTGGGCCACACATGGGGAGCCT
GCTCCTAAGAATAGTCATCCTCAAAGTTCTGGTGCTGGAAATGACTTTTTGGTTGTGCAC
AATGGTATTATCACCAATTATGAGGTATTGAAAGAGACCCTTCTCCGACATGGTTTCACC
TTTGAGTCTGAAACAGACACAGAAGTAATTCCGAAGCTTGCAAAATTTATCTTTGATAAA
GCTAATGAAGAAGGTGATCAGTGTGTGACATTCAGTCAAGTTGTGCTTGAGGTAATAAGG
CATCTAGAAGGAGCCTATGCTCTCACATTTAAAAGTCGACACTACCCAAATGAGTTGATT
GCTTGCAAACGTGGTAGTCCACTTCTTCTTGGTGTAAAAGACTTAGAAGAAAAGGCCTCA
TCAGGATCATCATTTAGTGATGCTAAATTTCCTTCAAGCAATGGACAACCAAAAGAATTA
TTCTTGTCCAGTGATGCCAATGCTTTGGTTGAACATACTAAAAAGGTCTTGGTAATTGAG
GATGGAGAAGTTGTTCACATCAAGGATGGAGGAGTGTCAATTTACAAATTTGACAAGGGT
AAGAATGGTGGTACTCTCAGTAGACCTGCTTCTGTTCAACGTGCCTTATCCATTTTGGAA
ATGGAGGTAGAACAGATAAACAAAGGAAAATATGAGCACTACATGCAAAAAGAAATCCAT
GAGCAGCCAGAATCTTTAACGACAACTATGCGAGGGAGACTTATACGTGCAGGATCATGT
AAAGCAAAGACTGTGCTTTTGGGGGGCCTGAAGGATCACCTCAAAACCATAAGAAGAAGC
AGGAGAATCGTTTTTGTTGGGTGTGGCACAAGTTACAATGCAGCTCTTGCTGCAAGATCC
ATTGTGGAAGAGCTTTCTGGTATTCCTGTAACCATGGAGATTGCCAGTGATTTAGTGGAC
AGACAAGGGCCAATATATCGAGAAGATACAGCTGTCTTCGTTAGTCAATCAGGAGAAACT
GCTGACACTTTGCTTGCATTAGAGTATGCTCTGGAAAATGGTGCATTATGTGTTGGCATT
ACAAATACTGTTGGTAGTGCAATTGCTAGGCACACTCACTGTGGTGTTCACATAAATGCG
GGCTGTGAGATAGGAGTTGCAAGTACTAAGGCATACACAAGCCAAATTGTTGTGATGGCC
ATGCTAGCTCTTGCAATCGGAGCTGATACACTCTCAAATCAAGCAAGAAGAGAAGCAATA
ATTGATGGTTTATTTTACTTGCCACGCAAAGTGAAAGCGGTGCTCAAGCTTGATGAAGAA
ATGAAGGATCTTGCTAAGCTGCTAATTGCTGAGCAATCACTTCTTGTTTTTGGAAGAGGT
TACAACTATGCATCAGCTCTTGAAGGTGCTTTGAAGGTAAAGGAGGTGGCACTCATGCAC
AGTGAAGGAATACTTGCTGGAGAGATGAAACATGGTCCCTTGGCTTTGGTTGATGAAAAT
CTCCCTATTGTAGTAATTGCCACCCGTGATTCTTGTTTTAGCAAACAACAGTCAGTCATT
CAACAACTTCATGCACGGAAAGGTCGACTGATAGTTATGTGCACAGAAGGAGATAAAGCA
TCTGTTTCTGTTGGTGGATCGTCTCGAGTAATTGAAGTTCCACAGGTTGTGGACTGTTTG
CAGCCCGTAATTAATGTAGTTCCATTACAGTTATTGGCCTATCATCTTACTGTACTGCGT
GGATACAATGTTGATCAACCTCGCAATCTTGCCAAGAGTGTCACAACGCAATGA