Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017408
CDS Infomation

pacid=37439307 polypeptide=PGSC0003DMP400011969 locus=PGSC0003DMG400006769 ID=PGSC0003DMT400017408.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGCAGTACTTTCTGCTCTAATGGAAGTCCTCTTCCAAAAGACAGCTTCCCAA
ATTTTCCAAAAAAATGGACTACTAGGAAGTACAAAGAAAGAGATGTTGAATCTACAGAGC
ACATTTTCAACAATTCAAGCTGTTTTACAAGATGCTGAGGATAGGCAAATGAAAGAAAAA
GCTTTGAAGAACTGGCTGGTGAAGCTCAAAGACATAGTCTATGAAGCAGATGATTTGTTG
GATGAATACATGACTGAATTGCTTCGCCATAAGGTAATTCTTGATGACAGGGAAACTCGT
TATTGTGTTTTCCATGCTGTTAATTCTCTTTATTTGAATGGTACATTAATTTTTTTGGGT
TATAGTATGAAGTTGAAACTGAAACAAGTTGTGGAAAAGTTAGACCTTGTTGCGAATGAG
AGAGCCAAATTTCATTTTAGGGATGCTGTTTATGAAAAAGGGTTTTCTTGTGAAAGACCA
CAGTCGGATTCTTATGTAATTGAATCGAAGATTTTAGGGAGAAATAAAGATAAAAAGAAT
ATAATCAAGTTACTTATAGGATCAGATGAGTCAGTTGTGAGTATTATTGGAATTGGAGGA
ATTGGGAAGACAACAGTTGCGAAATTGGTTTACAATGATGCTGTTGTGGAGAATAGTTTT
GATACAAGAATATGGGTTTGTGTCTCAGAAGGATTTAATGTGAAAAGACTTCTTAAAGCA
ATCATAGAATCTGGCACTGGTAGTAGTTGTAACCTTGTAGAGATGGATGTGATCCAGCGG
CGTGTCCAGGAGTTGATATTGGGCAAGAAATTTTTGCTTGTCCTAGATGATGTATGGGAT
GATGATCATGAGAAATATGAGAGATTAAAGAACTTAGTTCACAATGGTTTGGATGGGAGT
AAACTCCTAGTGACTACTCGCAATGAGAAGGTTGCATTACTGATGGGCACAACAAATCCA
TACCGTTTGGAAGGCCTTTCAGATGGTGATTGCTGGTCCTTGTTTCAGGAGCTTGCATAT
AAGAATAGGCAAAAAGAACTATTAGCTCTTGAGGAGGTTGGGAAAGAAATTGCAAAGAAA
TGTAGGGGAGTTCCTTTAGCGGCAAAGGCCCTTGGAAGTTTGATGTGCTTAAAGAATCAG
AAATCTGAGTGGTCCTTCATCCGAGATTGTGCAATGTGGGATCTTATGGGACATGAAGAT
GGAGCTGGTATTCTTTCGGCCCTAAGATTAAGTTATGAATACTTGCCAACACATTTGAAA
CAATGTTTTGCATATTGTTCGATATTTCCCAAGGGATATCGGATAAATAAAAACACCTTG
ATACGCCTATGGATGGCGGAAGGATTTGTTCCGTCCTCTGAAAGCATACCACCGGAAGAA
GTTGGGAATGGTTATTTCAATGAGTTGTTGTGGCGCTCCTTCTTCCAAAATGTGAGAAGA
GATTTTGATGGGATTATAGTCGAGTGTGACATGCATGATCTTGTTCATGATCTTGCCAAA
TCTGTAGGCGGTGTTGATTGTTTAACAACAGAATTTGGCAAGGAGGTTATCATTCCTGTG
GCGACACGCCACTTATCGATGTTTGGCAATGAGGTGGTACCTAAAAATCCCGGCATGTTG
AAGAGTGCTCAAAATCTGCGATCATTTCTTCTATTGGATGGTCAGAGAAATATCACAAAA
CTTTCCAAGAGTTTCTTTTTGAGCTTTAGATCTATTCGGGCTTTAGATTGCAGCGGTACT
CGCATAAAGAAGTTGTCTAATTCAATTGGTACTTTATTACATCTGCGGTACCTCAATCTT
TCACATACTCTGCTGAGAACATTGCCTAAGTCTATCTGTTGCCTCCTTAATCTTGAAGCT
TTAATACTTAAGCATTGCAACCATCTGATAGAACTTCCGGCAGAAATTAGAAAGTTGGTG
AACCTTAGACATCTGGATATATACGGATGCACATCCTTAACCATGTTACCTGGTGGCATT
GGACAGATGAGATCCCTTCAAACGTTGCCAGTTTACATTGTTAGCGATGCTGCTGCTAGT
GACATCTCAGAATTGCAGAGACTTGATCTTCATGGTGAATTAATGATCAAGAACCTTGAG
AATTTGTCCAATGAAATATGTGCCAAAAATGCAAACTTGAAAGGGAAGAGGCACATCCAA
TTTCTAAAATTAATATGGGCGCAAGTTGAAGAAATGGAGACAAGAGAAAATGTTGAGCGA
GTTGTTGAAGGCCTTCAACCAAATTCTGATTTGAGGAAGTTACACTTAGAGGGTTACATT
GGTGCAAATTTCCCCAGTTGGTTGATGACTACATACTTGGTAAACATTGTGGAACTCTCA
CTTCTCAAATGTCACAGGTGCGTGGAACTGCCTCAACTAGAGAAACTGCCTTTTCTTGAG
GTTCTCACTGTTGATGGAATGGATTCTGCAATGTATTTCTGCGGTAGTTCTGGTGGAAAG
GATTCGGCTACTCATTTTGCATCACTGAAGCAACTCACCCTCAGGAATATGCCCTGTCTA
CTGGGATGGTCAGTTAATGAAGATCATGGTATTCTTCCTCGTCTGAAGAAATTTACGTGT
GAGGCATGTCCCTCTTTGAATAACTTGCCATATCTACCCTCTCTCAACTCATTAGAGTTG
TCTGACTGTAGCAGTGAATTACTAGCTGAGACAGCAGCCAATGTTACCTCCCTTACTCAT
CTTATGATCAGTGGATTTTTGGAACTTATACACTTACCTGAAGGATTGCTGAAAAACAAT
ATAAGTCTGCTGTCTGTAGAAATTAGAGATTGTCCAGAGATTCGAAGTCTTTCGAGTGAG
CTGAAAGTTCTTCCTTGTATTGAGTCATTAAGCATCAGTAACTGTAAGAATCTCAGTTCT
GTGTTCGATTCCTGTGGACTTGGGACTTTGAAGTCCTTGTCCATTCATGGTTGCCATAAC
ATTAGCCTGGAAAAAGGATTACAAAATTTACAGTTTCTTCAATATGCATCACTCTCTGAC
TGTGGAAACTTGACAACCTTGCCGATGCCTATGCAACACCTTACGTCTCTCCAAACTCTG
CATATATGGAGCTGTTCTGAGATGTATATGCTTCCAGAATGGCTAGGAGACCTCAGTTCC
CTTAGAGAATTGGAGCTGTGGTACTGCAGAAAATTAAGTTCTCTACCAGAATCAGTGAAA
AACCTAACCAAGCTTCAGTTTCTGTCTGTATGGGGCTGTCCAAATTTGGGATCAAGATGC
AGAAATGATGTTGGAGAAGATTGGCACAAGATAAAACACGTTCCATTCATCAAGATTAAT
GGTCCATATATCCAAGCTATGACAGGTTATCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400011969
PEP Infomation

pacid=37439307 transcript=PGSC0003DMT400017408 locus=PGSC0003DMG400006769 ID=PGSC0003DMT400017408.v4.03 annot-version=v4.03
Sequence

MAEAVLSALMEVLFQKTASQIFQKNGLLGSTKKEMLNLQSTFSTIQAVLQDAEDRQMKEK
ALKNWLVKLKDIVYEADDLLDEYMTELLRHKVILDDRETRYCVFHAVNSLYLNGTLIFLG
YSMKLKLKQVVEKLDLVANERAKFHFRDAVYEKGFSCERPQSDSYVIESKILGRNKDKKN
IIKLLIGSDESVVSIIGIGGIGKTTVAKLVYNDAVVENSFDTRIWVCVSEGFNVKRLLKA
IIESGTGSSCNLVEMDVIQRRVQELILGKKFLLVLDDVWDDDHEKYERLKNLVHNGLDGS
KLLVTTRNEKVALLMGTTNPYRLEGLSDGDCWSLFQELAYKNRQKELLALEEVGKEIAKK
CRGVPLAAKALGSLMCLKNQKSEWSFIRDCAMWDLMGHEDGAGILSALRLSYEYLPTHLK
QCFAYCSIFPKGYRINKNTLIRLWMAEGFVPSSESIPPEEVGNGYFNELLWRSFFQNVRR
DFDGIIVECDMHDLVHDLAKSVGGVDCLTTEFGKEVIIPVATRHLSMFGNEVVPKNPGML
KSAQNLRSFLLLDGQRNITKLSKSFFLSFRSIRALDCSGTRIKKLSNSIGTLLHLRYLNL
SHTLLRTLPKSICCLLNLEALILKHCNHLIELPAEIRKLVNLRHLDIYGCTSLTMLPGGI
GQMRSLQTLPVYIVSDAAASDISELQRLDLHGELMIKNLENLSNEICAKNANLKGKRHIQ
FLKLIWAQVEEMETRENVERVVEGLQPNSDLRKLHLEGYIGANFPSWLMTTYLVNIVELS
LLKCHRCVELPQLEKLPFLEVLTVDGMDSAMYFCGSSGGKDSATHFASLKQLTLRNMPCL
LGWSVNEDHGILPRLKKFTCEACPSLNNLPYLPSLNSLELSDCSSELLAETAANVTSLTH
LMISGFLELIHLPEGLLKNNISLLSVEIRDCPEIRSLSSELKVLPCIESLSISNCKNLSS
VFDSCGLGTLKSLSIHGCHNISLEKGLQNLQFLQYASLSDCGNLTTLPMPMQHLTSLQTL
HIWSCSEMYMLPEWLGDLSSLRELELWYCRKLSSLPESVKNLTKLQFLSVWGCPNLGSRC
RNDVGEDWHKIKHVPFIKINGPYIQAMTGYP*

Transcript Sequence

Transcript ID

PGSC0003DMT400017408
Transcript Infomation

pacid=37439307 locus=PGSC0003DMG400006769 ID=PGSC0003DMT400017408.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGCAGTACTTTCTGCTCTAATGGAAGTCCTCTTCCAAAAGACAGCTTCCCAA
ATTTTCCAAAAAAATGGACTACTAGGAAGTACAAAGAAAGAGATGTTGAATCTACAGAGC
ACATTTTCAACAATTCAAGCTGTTTTACAAGATGCTGAGGATAGGCAAATGAAAGAAAAA
GCTTTGAAGAACTGGCTGGTGAAGCTCAAAGACATAGTCTATGAAGCAGATGATTTGTTG
GATGAATACATGACTGAATTGCTTCGCCATAAGGTAATTCTTGATGACAGGGAAACTCGT
TATTGTGTTTTCCATGCTGTTAATTCTCTTTATTTGAATGGTACATTAATTTTTTTGGGT
TATAGTATGAAGTTGAAACTGAAACAAGTTGTGGAAAAGTTAGACCTTGTTGCGAATGAG
AGAGCCAAATTTCATTTTAGGGATGCTGTTTATGAAAAAGGGTTTTCTTGTGAAAGACCA
CAGTCGGATTCTTATGTAATTGAATCGAAGATTTTAGGGAGAAATAAAGATAAAAAGAAT
ATAATCAAGTTACTTATAGGATCAGATGAGTCAGTTGTGAGTATTATTGGAATTGGAGGA
ATTGGGAAGACAACAGTTGCGAAATTGGTTTACAATGATGCTGTTGTGGAGAATAGTTTT
GATACAAGAATATGGGTTTGTGTCTCAGAAGGATTTAATGTGAAAAGACTTCTTAAAGCA
ATCATAGAATCTGGCACTGGTAGTAGTTGTAACCTTGTAGAGATGGATGTGATCCAGCGG
CGTGTCCAGGAGTTGATATTGGGCAAGAAATTTTTGCTTGTCCTAGATGATGTATGGGAT
GATGATCATGAGAAATATGAGAGATTAAAGAACTTAGTTCACAATGGTTTGGATGGGAGT
AAACTCCTAGTGACTACTCGCAATGAGAAGGTTGCATTACTGATGGGCACAACAAATCCA
TACCGTTTGGAAGGCCTTTCAGATGGTGATTGCTGGTCCTTGTTTCAGGAGCTTGCATAT
AAGAATAGGCAAAAAGAACTATTAGCTCTTGAGGAGGTTGGGAAAGAAATTGCAAAGAAA
TGTAGGGGAGTTCCTTTAGCGGCAAAGGCCCTTGGAAGTTTGATGTGCTTAAAGAATCAG
AAATCTGAGTGGTCCTTCATCCGAGATTGTGCAATGTGGGATCTTATGGGACATGAAGAT
GGAGCTGGTATTCTTTCGGCCCTAAGATTAAGTTATGAATACTTGCCAACACATTTGAAA
CAATGTTTTGCATATTGTTCGATATTTCCCAAGGGATATCGGATAAATAAAAACACCTTG
ATACGCCTATGGATGGCGGAAGGATTTGTTCCGTCCTCTGAAAGCATACCACCGGAAGAA
GTTGGGAATGGTTATTTCAATGAGTTGTTGTGGCGCTCCTTCTTCCAAAATGTGAGAAGA
GATTTTGATGGGATTATAGTCGAGTGTGACATGCATGATCTTGTTCATGATCTTGCCAAA
TCTGTAGGCGGTGTTGATTGTTTAACAACAGAATTTGGCAAGGAGGTTATCATTCCTGTG
GCGACACGCCACTTATCGATGTTTGGCAATGAGGTGGTACCTAAAAATCCCGGCATGTTG
AAGAGTGCTCAAAATCTGCGATCATTTCTTCTATTGGATGGTCAGAGAAATATCACAAAA
CTTTCCAAGAGTTTCTTTTTGAGCTTTAGATCTATTCGGGCTTTAGATTGCAGCGGTACT
CGCATAAAGAAGTTGTCTAATTCAATTGGTACTTTATTACATCTGCGGTACCTCAATCTT
TCACATACTCTGCTGAGAACATTGCCTAAGTCTATCTGTTGCCTCCTTAATCTTGAAGCT
TTAATACTTAAGCATTGCAACCATCTGATAGAACTTCCGGCAGAAATTAGAAAGTTGGTG
AACCTTAGACATCTGGATATATACGGATGCACATCCTTAACCATGTTACCTGGTGGCATT
GGACAGATGAGATCCCTTCAAACGTTGCCAGTTTACATTGTTAGCGATGCTGCTGCTAGT
GACATCTCAGAATTGCAGAGACTTGATCTTCATGGTGAATTAATGATCAAGAACCTTGAG
AATTTGTCCAATGAAATATGTGCCAAAAATGCAAACTTGAAAGGGAAGAGGCACATCCAA
TTTCTAAAATTAATATGGGCGCAAGTTGAAGAAATGGAGACAAGAGAAAATGTTGAGCGA
GTTGTTGAAGGCCTTCAACCAAATTCTGATTTGAGGAAGTTACACTTAGAGGGTTACATT
GGTGCAAATTTCCCCAGTTGGTTGATGACTACATACTTGGTAAACATTGTGGAACTCTCA
CTTCTCAAATGTCACAGGTGCGTGGAACTGCCTCAACTAGAGAAACTGCCTTTTCTTGAG
GTTCTCACTGTTGATGGAATGGATTCTGCAATGTATTTCTGCGGTAGTTCTGGTGGAAAG
GATTCGGCTACTCATTTTGCATCACTGAAGCAACTCACCCTCAGGAATATGCCCTGTCTA
CTGGGATGGTCAGTTAATGAAGATCATGGTATTCTTCCTCGTCTGAAGAAATTTACGTGT
GAGGCATGTCCCTCTTTGAATAACTTGCCATATCTACCCTCTCTCAACTCATTAGAGTTG
TCTGACTGTAGCAGTGAATTACTAGCTGAGACAGCAGCCAATGTTACCTCCCTTACTCAT
CTTATGATCAGTGGATTTTTGGAACTTATACACTTACCTGAAGGATTGCTGAAAAACAAT
ATAAGTCTGCTGTCTGTAGAAATTAGAGATTGTCCAGAGATTCGAAGTCTTTCGAGTGAG
CTGAAAGTTCTTCCTTGTATTGAGTCATTAAGCATCAGTAACTGTAAGAATCTCAGTTCT
GTGTTCGATTCCTGTGGACTTGGGACTTTGAAGTCCTTGTCCATTCATGGTTGCCATAAC
ATTAGCCTGGAAAAAGGATTACAAAATTTACAGTTTCTTCAATATGCATCACTCTCTGAC
TGTGGAAACTTGACAACCTTGCCGATGCCTATGCAACACCTTACGTCTCTCCAAACTCTG
CATATATGGAGCTGTTCTGAGATGTATATGCTTCCAGAATGGCTAGGAGACCTCAGTTCC
CTTAGAGAATTGGAGCTGTGGTACTGCAGAAAATTAAGTTCTCTACCAGAATCAGTGAAA
AACCTAACCAAGCTTCAGTTTCTGTCTGTATGGGGCTGTCCAAATTTGGGATCAAGATGC
AGAAATGATGTTGGAGAAGATTGGCACAAGATAAAACACGTTCCATTCATCAAGATTAAT
GGTCCATATATCCAAGCTATGACAGGTTATCCTTGA