Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017259
CDS Infomation

pacid=37451407 polypeptide=PGSC0003DMP400011894 locus=PGSC0003DMG400006727 ID=PGSC0003DMT400017259.v4.03 annot-version=v4.03
Sequence

ATGGCTTATGGTAATTCGAGATCTGTAAGATTCCAAGATGATCTTGAAGCAACAAAGTAT
GCACCAGCTCATGAAGATAATGTGATCGAGGTGAAGCATAAGCTTGATGGAGTACGACAA
TCAGAGCCAGCCAGTAGAAAGAGTGATAAGAAGTATGACGGGGGTAGAAAATCCCTGAAA
TCTAAAGTACTATCACGAGTTTTTTCAGAAGACTATGAAAGAGTGAACAAAAAGATATTG
GATCCTCGAGGACATGTAATTCGTAAATGGAACAAGATTTTCTTAGTATCTTGTTTAGTT
TCATTGTTCGTAGACCCCCTATTGTTTTACTTGCCAGTCGTTAACCAAGATATCTGCATA
GATATAGGAGTTACTCTGGAAATTATCCTCACAGTTATTAGATCAATAGCTGATATCTTT
TACGTGATTCAGATTTTTGTTCGATTTAGAACTGCTTATGTTGCTCCATCTTCTCGTGTA
TTTGGGAGAGGAGAGCTTGTTATAGATACTTCGAAAATAGAACAAAGATATATTAGAAAA
GGTCTCTTGATTGATGTCATTGCAGCCCTGCCTTTACCTCAGGTGTTGATTTGGGCTGTT
ATCCCTAATTTAAGGGGATCAACAATGGCAAACACGAAGAACGTCCTAAGATTCATTATC
ATTTTTCAGTATCTCCCTAGACTTTATCTCATATTTCCATTGTCATCGCAAATTGTCAAG
GCTACTGGTGTTGTGACTGAAACAGCATGGGCAGGAGCTGCTTACAACTTGATGCTCTAC
ATGTTAGCAAGCCATGTACTGGGAGCTTGTTGGTATCTTTTATCAATTGAGAGGCAAGAA
GCTTGTTGGATGTACGTGTGCAATCTTGAGAAGCCGTCTTGTGATTATGGATATTTTGAC
TGCCAGAGTATAAATGATCCACAAAGGAAGTCCTGGTTCAATTCCAGCAACATTACAAGA
CAATGTGACCCAAATAAAAGTGATTACCCATTTGGTATTTATGGTGACGCGGTGACAGTT
AGCGTGACATCTGCTTTGTTTTTCAACAAGTACTTCTACTGCCTCTGGTGGGGCTTGAAG
AACCTAAGTGCTCTAGGACAAGATCTTTCTACAAGCACTCATATTGGAGAAATAAGTTTT
GCCATCATAGTTGCAACGCTCGGCCTGGTTCTTTTTGCCTTGCTCATCGGCAATATGCAA
ACATACCTCCAATCGACAACAGTCAGATTAGAGGAGTGGAGAATCAGGAGAATGGATACA
GAACAATGGATGCACCACAGGCAGTTACCTCAAGAATTAAGGCAGTCAGTAAGGAAATAT
GATCAATACAAATGGATTGCTACAAGAGGAGTTGATGAGGAAGCTCTTATCAAAGGACTT
CCTCTAGATCTTCGCAGAGATATCAAACGCCACCTCTGCTACGATTTAGTTCGAAGAGTA
CCACTGTTTGATCAAATGGATGAAAGAATGCTAGACGCAATATGTGAGAGGCTAAAGCCT
GCATTGTGCACTCAAGGCACTTGTCTTGTGCGCGAGGGTGATCCTGTCAATGAAATGCTC
TTCATAATTCGAGGGAATCTTGATTCTTACACCACGAATGGTGGCCGTACTGGTTTCTTC
AATTCTTGCCGTATAGGTCCAGGTGATTTCTGTGGGGAGGAGCTGCTGACATGGGCTCTC
AATCGACGTCCAAGTGTGATTCTACCATCCTCCACTCGAACAGTGAAAGCAGTTTCTGAA
GTAGAGTCATTCGCACTTGTTGCAGAGGACTTGAAGTTTGTGGCAGCACAGTTTCGGAGG
CTGCATAGCAAACAACTGAGGCACAAATTCAGGTTCTATTCGCACCAGTGGCGTACTTGG
GCTGCATGTTTCATTCAGGCTGCATACCGTAGATATAAAAAACGAAAGGGTGTAGCTGAA
CTTGAGGCTCTAGAGAATTTGGTGAATGAAACAGAGTCATTTAGTGGGCAATTGGATATG
AATGCACCATCACCTAGATCAGGTTTTGCAGAATATGCAACAAGATGGGCAGCAAGTAGA
AGGGGTCTTCACAAGCACTCTGATTCAGATTCCTCTGCAGTTAGTTCATTACAAAAGCCA
GAAGAACCTGATTTCTCTGTTGATGATGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011894
PEP Infomation

pacid=37451407 transcript=PGSC0003DMT400017259 locus=PGSC0003DMG400006727 ID=PGSC0003DMT400017259.v4.03 annot-version=v4.03
Sequence

MAYGNSRSVRFQDDLEATKYAPAHEDNVIEVKHKLDGVRQSEPASRKSDKKYDGGRKSLK
SKVLSRVFSEDYERVNKKILDPRGHVIRKWNKIFLVSCLVSLFVDPLLFYLPVVNQDICI
DIGVTLEIILTVIRSIADIFYVIQIFVRFRTAYVAPSSRVFGRGELVIDTSKIEQRYIRK
GLLIDVIAALPLPQVLIWAVIPNLRGSTMANTKNVLRFIIIFQYLPRLYLIFPLSSQIVK
ATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWMYVCNLEKPSCDYGYFD
CQSINDPQRKSWFNSSNITRQCDPNKSDYPFGIYGDAVTVSVTSALFFNKYFYCLWWGLK
NLSALGQDLSTSTHIGEISFAIIVATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRMDT
EQWMHHRQLPQELRQSVRKYDQYKWIATRGVDEEALIKGLPLDLRRDIKRHLCYDLVRRV
PLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFF
NSCRIGPGDFCGEELLTWALNRRPSVILPSSTRTVKAVSEVESFALVAEDLKFVAAQFRR
LHSKQLRHKFRFYSHQWRTWAACFIQAAYRRYKKRKGVAELEALENLVNETESFSGQLDM
NAPSPRSGFAEYATRWAASRRGLHKHSDSDSSAVSSLQKPEEPDFSVDDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400017259
Transcript Infomation

pacid=37451407 locus=PGSC0003DMG400006727 ID=PGSC0003DMT400017259.v4.03 annot-version=v4.03
Sequence

ATGGCTTATGGTAATTCGAGATCTGTAAGATTCCAAGATGATCTTGAAGCAACAAAGTAT
GCACCAGCTCATGAAGATAATGTGATCGAGGTGAAGCATAAGCTTGATGGAGTACGACAA
TCAGAGCCAGCCAGTAGAAAGAGTGATAAGAAGTATGACGGGGGTAGAAAATCCCTGAAA
TCTAAAGTACTATCACGAGTTTTTTCAGAAGACTATGAAAGAGTGAACAAAAAGATATTG
GATCCTCGAGGACATGTAATTCGTAAATGGAACAAGATTTTCTTAGTATCTTGTTTAGTT
TCATTGTTCGTAGACCCCCTATTGTTTTACTTGCCAGTCGTTAACCAAGATATCTGCATA
GATATAGGAGTTACTCTGGAAATTATCCTCACAGTTATTAGATCAATAGCTGATATCTTT
TACGTGATTCAGATTTTTGTTCGATTTAGAACTGCTTATGTTGCTCCATCTTCTCGTGTA
TTTGGGAGAGGAGAGCTTGTTATAGATACTTCGAAAATAGAACAAAGATATATTAGAAAA
GGTCTCTTGATTGATGTCATTGCAGCCCTGCCTTTACCTCAGGTGTTGATTTGGGCTGTT
ATCCCTAATTTAAGGGGATCAACAATGGCAAACACGAAGAACGTCCTAAGATTCATTATC
ATTTTTCAGTATCTCCCTAGACTTTATCTCATATTTCCATTGTCATCGCAAATTGTCAAG
GCTACTGGTGTTGTGACTGAAACAGCATGGGCAGGAGCTGCTTACAACTTGATGCTCTAC
ATGTTAGCAAGCCATGTACTGGGAGCTTGTTGGTATCTTTTATCAATTGAGAGGCAAGAA
GCTTGTTGGATGTACGTGTGCAATCTTGAGAAGCCGTCTTGTGATTATGGATATTTTGAC
TGCCAGAGTATAAATGATCCACAAAGGAAGTCCTGGTTCAATTCCAGCAACATTACAAGA
CAATGTGACCCAAATAAAAGTGATTACCCATTTGGTATTTATGGTGACGCGGTGACAGTT
AGCGTGACATCTGCTTTGTTTTTCAACAAGTACTTCTACTGCCTCTGGTGGGGCTTGAAG
AACCTAAGTGCTCTAGGACAAGATCTTTCTACAAGCACTCATATTGGAGAAATAAGTTTT
GCCATCATAGTTGCAACGCTCGGCCTGGTTCTTTTTGCCTTGCTCATCGGCAATATGCAA
ACATACCTCCAATCGACAACAGTCAGATTAGAGGAGTGGAGAATCAGGAGAATGGATACA
GAACAATGGATGCACCACAGGCAGTTACCTCAAGAATTAAGGCAGTCAGTAAGGAAATAT
GATCAATACAAATGGATTGCTACAAGAGGAGTTGATGAGGAAGCTCTTATCAAAGGACTT
CCTCTAGATCTTCGCAGAGATATCAAACGCCACCTCTGCTACGATTTAGTTCGAAGAGTA
CCACTGTTTGATCAAATGGATGAAAGAATGCTAGACGCAATATGTGAGAGGCTAAAGCCT
GCATTGTGCACTCAAGGCACTTGTCTTGTGCGCGAGGGTGATCCTGTCAATGAAATGCTC
TTCATAATTCGAGGGAATCTTGATTCTTACACCACGAATGGTGGCCGTACTGGTTTCTTC
AATTCTTGCCGTATAGGTCCAGGTGATTTCTGTGGGGAGGAGCTGCTGACATGGGCTCTC
AATCGACGTCCAAGTGTGATTCTACCATCCTCCACTCGAACAGTGAAAGCAGTTTCTGAA
GTAGAGTCATTCGCACTTGTTGCAGAGGACTTGAAGTTTGTGGCAGCACAGTTTCGGAGG
CTGCATAGCAAACAACTGAGGCACAAATTCAGGTTCTATTCGCACCAGTGGCGTACTTGG
GCTGCATGTTTCATTCAGGCTGCATACCGTAGATATAAAAAACGAAAGGGTGTAGCTGAA
CTTGAGGCTCTAGAGAATTTGGTGAATGAAACAGAGTCATTTAGTGGGCAATTGGATATG
AATGCACCATCACCTAGATCAGGTTTTGCAGAATATGCAACAAGATGGGCAGCAAGTAGA
AGGGGTCTTCACAAGCACTCTGATTCAGATTCCTCTGCAGTTAGTTCATTACAAAAGCCA
GAAGAACCTGATTTCTCTGTTGATGATGAGTAA