Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016998
CDS Infomation

pacid=37458199 polypeptide=PGSC0003DMP400011745 locus=PGSC0003DMG400006640 ID=PGSC0003DMT400016998.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGACTGGTGTTGTTGAAGGAGATCCACTTACGGTTAAAGAGATGGAGTTGAAA
AGGGAGTTGCAGAGATTAGTTAAGGCCATTTTGTCTCAAGAGGAGATTAATGTTGATGCT
ATTGATAAAACCCAGCAAATCCTTCTTGCTTTGAAGGAATTAAAACTTAAACGACGTTCA
TCCTCTTTCGATCTTCCTTTTCCTGAGGAATTTCGATGTCCGCTTTCTAAACAACTTATG
AGAGATCCTGTCATGCTTGCCTCCGGTCAGACTTATGATAGACCCTTCATTCAGAAATGG
TTAAAAGCTGGGAATAGGACGTGCCCTCAAACACAACAAGTACTTTCACATACAATTCTT
ACACCTAATCACTTGATTCGGGATATGATATCGCAATGGTGTAAAAATAATGGGATTCAA
ATGCCAGACTCTGTTCAGTTTTTGAATGATGAAGGGTTGACTGAAGCTGACCGTGATTTG
TTCTTGTCGTTGCTTGAGAAGATGTCTTCAACGTTATCTGATCAAAAGGTTGCTGCAAGA
GAATTACGTTTGTTAACGAAGAAAATGCCTTCCTTTCGGTCACTATTTGGAGAATCTGCT
GATGCAATTCCTCAACTTGTTCGTCCCCTATCTCAAAGCAACAGCAATGTTAATCCAAAT
CTCCAGGAAGACATAATCACAACACTTTTGAATCTTTCCATCCATGACAACAATAAGAAG
CTTGTCGCGGAGACTCCAAAGGTTATTCCACTTCTTGTGGATGCATTAAGGTCAGGAACA
ATTGAAACAAGGAGCAATGCAGCAGCTGCACTTTTTACATTATCTGCGCTTGATTCTAAT
AAAGAGCTTATAGGAAAATCTGGTGCCCTGAAACCACTGGTTGAACTTCTAGATGAAGGG
AACCCAGTCGCAATGAAGGATGTTGCTTCAGCTCTTTTTAGTCTATGCATTATTCAGGAC
AATAAGGCGAGAGCGGTTAGAGATGGTGCTGTGAGGGCTATACTGAAAAAGATTATGAGT
AACGTGCACGTCGATGAGTTACTAGCTATACTAGCTATGCTATCAAATAATCAAAAGGCA
GTTGAGGAGATGGGAGACCTTGGGGCGGTTACATGTCTGCTTAATATAATAAGGGAGACC
TCGTGTGCTCGCAGCAAGGAGAATTGTATTGCAGTCCTTTATACAATCTGTTACAGTGAT
CGAACCAAGTGGAAGACATTAAGGGATGAGGAGAAAACGTATGGGACAATCTCTCAACTT
GCTCAAAATGGTACAGCAAGAGCCAAGAGAAAGGCTAATGGTATTCTTGACAGACTGAAC
AGGGCTATCAATCTTACTCATACTGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400011745
PEP Infomation

pacid=37458199 transcript=PGSC0003DMT400016998 locus=PGSC0003DMG400006640 ID=PGSC0003DMT400016998.v4.03 annot-version=v4.03
Sequence

MAKTGVVEGDPLTVKEMELKRELQRLVKAILSQEEINVDAIDKTQQILLALKELKLKRRS
SSFDLPFPEEFRCPLSKQLMRDPVMLASGQTYDRPFIQKWLKAGNRTCPQTQQVLSHTIL
TPNHLIRDMISQWCKNNGIQMPDSVQFLNDEGLTEADRDLFLSLLEKMSSTLSDQKVAAR
ELRLLTKKMPSFRSLFGESADAIPQLVRPLSQSNSNVNPNLQEDIITTLLNLSIHDNNKK
LVAETPKVIPLLVDALRSGTIETRSNAAAALFTLSALDSNKELIGKSGALKPLVELLDEG
NPVAMKDVASALFSLCIIQDNKARAVRDGAVRAILKKIMSNVHVDELLAILAMLSNNQKA
VEEMGDLGAVTCLLNIIRETSCARSKENCIAVLYTICYSDRTKWKTLRDEEKTYGTISQL
AQNGTARAKRKANGILDRLNRAINLTHTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400016998
Transcript Infomation

pacid=37458199 locus=PGSC0003DMG400006640 ID=PGSC0003DMT400016998.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGACTGGTGTTGTTGAAGGAGATCCACTTACGGTTAAAGAGATGGAGTTGAAA
AGGGAGTTGCAGAGATTAGTTAAGGCCATTTTGTCTCAAGAGGAGATTAATGTTGATGCT
ATTGATAAAACCCAGCAAATCCTTCTTGCTTTGAAGGAATTAAAACTTAAACGACGTTCA
TCCTCTTTCGATCTTCCTTTTCCTGAGGAATTTCGATGTCCGCTTTCTAAACAACTTATG
AGAGATCCTGTCATGCTTGCCTCCGGTCAGACTTATGATAGACCCTTCATTCAGAAATGG
TTAAAAGCTGGGAATAGGACGTGCCCTCAAACACAACAAGTACTTTCACATACAATTCTT
ACACCTAATCACTTGATTCGGGATATGATATCGCAATGGTGTAAAAATAATGGGATTCAA
ATGCCAGACTCTGTTCAGTTTTTGAATGATGAAGGGTTGACTGAAGCTGACCGTGATTTG
TTCTTGTCGTTGCTTGAGAAGATGTCTTCAACGTTATCTGATCAAAAGGTTGCTGCAAGA
GAATTACGTTTGTTAACGAAGAAAATGCCTTCCTTTCGGTCACTATTTGGAGAATCTGCT
GATGCAATTCCTCAACTTGTTCGTCCCCTATCTCAAAGCAACAGCAATGTTAATCCAAAT
CTCCAGGAAGACATAATCACAACACTTTTGAATCTTTCCATCCATGACAACAATAAGAAG
CTTGTCGCGGAGACTCCAAAGGTTATTCCACTTCTTGTGGATGCATTAAGGTCAGGAACA
ATTGAAACAAGGAGCAATGCAGCAGCTGCACTTTTTACATTATCTGCGCTTGATTCTAAT
AAAGAGCTTATAGGAAAATCTGGTGCCCTGAAACCACTGGTTGAACTTCTAGATGAAGGG
AACCCAGTCGCAATGAAGGATGTTGCTTCAGCTCTTTTTAGTCTATGCATTATTCAGGAC
AATAAGGCGAGAGCGGTTAGAGATGGTGCTGTGAGGGCTATACTGAAAAAGATTATGAGT
AACGTGCACGTCGATGAGTTACTAGCTATACTAGCTATGCTATCAAATAATCAAAAGGCA
GTTGAGGAGATGGGAGACCTTGGGGCGGTTACATGTCTGCTTAATATAATAAGGGAGACC
TCGTGTGCTCGCAGCAAGGAGAATTGTATTGCAGTCCTTTATACAATCTGTTACAGTGAT
CGAACCAAGTGGAAGACATTAAGGGATGAGGAGAAAACGTATGGGACAATCTCTCAACTT
GCTCAAAATGGTACAGCAAGAGCCAAGAGAAAGGCTAATGGTATTCTTGACAGACTGAAC
AGGGCTATCAATCTTACTCATACTGCATAA