Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016837
CDS Infomation

pacid=37461680 polypeptide=PGSC0003DMP400011643 locus=PGSC0003DMG400006586 ID=PGSC0003DMT400016837.v4.03 annot-version=v4.03
Sequence

ATGAAGAATAGGGAGATTGGGAGGGCAAGGAATTGTTATGAAAGGGCTGTGGATAAGTTG
GCAGTTGACGATGAGGAAGCTGAGCAGTTGTTTGTGGCATTTGCAGAGTTCGAGGACAAG
TGTAGGGAGACGGACAGAGCAAGGTGCATTGCACTTGACCACATACCGAAAGGGCGAGCT
GAGGATTTGTACAGCAAGTTTGTTGCATTTGAAAAGCACAAATTCGCTGAGTTAGAGAGG
TCCTTGTATGAAACAGAGAGAGCCAGAGCTGTTTTTGAGCTTGCAATTGATCAACCTGCA
CTGGATATTCCAGAGTTACTATGGAAGGCTTACATCGACTTTGAGATCTCTGAGGGTGAA
TTTGAAAGAACAAGAGCACTATATAAAAGACTTCTTAACCACACGAAACATTTAAAGGTG
TGGATAAGTTATTCGGTTATTGATGATTCAGATATCAAACAGAAAAAGAAGTGCTTGCAA
CATGCCAGAGATGTGTTCGAGAGGGCCGTTTCTTACTTGATAAATTCGGCACCTGAACTG
AAAGAAGAAAGAGTAATGCTTCTGGAAGAATGGATATATATGGAAAGCAATTTTGGTGAT
GCCAATTTAGTCCGTGCCAAACTACCAAAGAAACTGAAGAAGAGAAGGCAAATAGAGACG
GAGGATGGTCCAGCAGCGTACGAGGAGTACATACACTATCTTTTTCCTGAGCAGACTACT
AGTATGAAACTCTTGGACTCTGCTTATAAATGGAAGAAGCAACGAGTTGCATCCAAGAAT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400011643
PEP Infomation

pacid=37461680 transcript=PGSC0003DMT400016837 locus=PGSC0003DMG400006586 ID=PGSC0003DMT400016837.v4.03 annot-version=v4.03
Sequence

MKNREIGRARNCYERAVDKLAVDDEEAEQLFVAFAEFEDKCRETDRARCIALDHIPKGRA
EDLYSKFVAFEKHKFAELERSLYETERARAVFELAIDQPALDIPELLWKAYIDFEISEGE
FERTRALYKRLLNHTKHLKVWISYSVIDDSDIKQKKKCLQHARDVFERAVSYLINSAPEL
KEERVMLLEEWIYMESNFGDANLVRAKLPKKLKKRRQIETEDGPAAYEEYIHYLFPEQTT
SMKLLDSAYKWKKQRVASKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400016837
Transcript Infomation

pacid=37461680 locus=PGSC0003DMG400006586 ID=PGSC0003DMT400016837.v4.03 annot-version=v4.03
Sequence

ATGAAGAATAGGGAGATTGGGAGGGCAAGGAATTGTTATGAAAGGGCTGTGGATAAGTTG
GCAGTTGACGATGAGGAAGCTGAGCAGTTGTTTGTGGCATTTGCAGAGTTCGAGGACAAG
TGTAGGGAGACGGACAGAGCAAGGTGCATTGCACTTGACCACATACCGAAAGGGCGAGCT
GAGGATTTGTACAGCAAGTTTGTTGCATTTGAAAAGCACAAATTCGCTGAGTTAGAGAGG
TCCTTGTATGAAACAGAGAGAGCCAGAGCTGTTTTTGAGCTTGCAATTGATCAACCTGCA
CTGGATATTCCAGAGTTACTATGGAAGGCTTACATCGACTTTGAGATCTCTGAGGGTGAA
TTTGAAAGAACAAGAGCACTATATAAAAGACTTCTTAACCACACGAAACATTTAAAGGTG
TGGATAAGTTATTCGGTTATTGATGATTCAGATATCAAACAGAAAAAGAAGTGCTTGCAA
CATGCCAGAGATGTGTTCGAGAGGGCCGTTTCTTACTTGATAAATTCGGCACCTGAACTG
AAAGAAGAAAGAGTAATGCTTCTGGAAGAATGGATATATATGGAAAGCAATTTTGGTGAT
GCCAATTTAGTCCGTGCCAAACTACCAAAGAAACTGAAGAAGAGAAGGCAAATAGAGACG
GAGGATGGTCCAGCAGCGTACGAGGAGTACATACACTATCTTTTTCCTGAGCAGACTACT
AGTATGAAACTCTTGGACTCTGCTTATAAATGGAAGAAGCAACGAGTTGCATCCAAGAAT
TAG