Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016775
CDS Infomation

pacid=37437228 polypeptide=PGSC0003DMP400011595 locus=PGSC0003DMG400006560 ID=PGSC0003DMT400016775.v4.03 annot-version=v4.03
Sequence

ATGGCAAACAAAAGCTTGGGGGACAATAGGACCAGGACTTCTGTGTCAATATTTATTGTA
GCCGGTCTCTGTTGCTTCTTCTATTTGCTTGGATCATGGCAGAGAAGTGGCGTTGGGAAG
GGAGATAGTATAGCTCTGGCAGTCACCAAGAGTGGTGAGAACTGCAATATCCTACCAAAT
CTCAATTTTGAGACTCGTCATGGTGGCCAAGCAGGTAGTATTGATGATTCAGGAACAGAA
GTCAAAAAATTTAAGCCATGTCGTCCTCGTTACACTGATCATACACCATGTCAAGATCAA
AAGCGTGCTATGCACTTCCCAAGGGAAAATATGATCTATCGAGAAAGGCATTGTCCGCCT
CCAGAAAAGAAGTTGCATTGCCTTATTCCAGCACCTAAGGGGTATGTCACCCCATTTCCA
TGGCCAAAGAGTCGGGATTATGTTCCATATGCGAATGCCCCCTATAAGAGCTTGACGGTC
GAGAAGGCCATTCAGAACTGGATTCAGTATGAAGGTAATGTGTTTAGGTTCCCTGGAGGA
GGGACACAGTTTCCTCAAGGAGCAGATAAGTATATTGATCAGCTTGCTTCAGTAATCCCA
ATTCAAAATGGAACTGTTCGGACTGCTCTGGACACTGGTTGCGGGGTCGCAAGTTGGGGT
GCTTATCTCTGGAAAAGGAATGTCATCGCGATGTCATTTGCTCCACGAGACTCACATGAA
GCTCAGGTTCAGTTTGCTCTTGAAAGGGGTGTACCTGCTGTTATTGGCGTCCTAGGAACA
GTCAAAATGCCATATCCATCTAGGGCCTTTGATATGGCTCATTGTTCTCGCTGTCTAATC
CCATGGGGAGCTGCTGATGGAATCCTCATGATGGAAGTTGATAGAGTTCTTCGACCTGGT
GGCTACTGGGTGCTTTCTGGCCCTCCGATCAATTGGAAGACTAATTACAAGGCCTGGCAA
CGCCCCATGGAGGACCTTCAGGAAGAACAAAGGAAAATTGAAGAGATTGCCAAACTTCTT
TGCTGGGAGAAGAAATCTGAGAAGGGTGAGACTGCAATTTGGCAGAAAAGGATGGATGCC
GACTCATGCCGTTCTACACAAGAAGATTCTGAAGCTACACTTTGTAAATCGACAGATCCA
GATGATGTCTGGTACAACAAAATGGAAACATGCATAACACCAAGCAAAGGCAATGGTGAT
GATGAAGGTCTAAGACCATTCCCTGAGAGACTTTTTGCTGTTCCTCCAAGAATTGCTAAT
GGACTAGTTTCTGGAGTCTCCGTTGAGGCATATCTGGAAGACAGCAAGAAATGGAAGAAG
CATGTTAGTGCTTATAAGAAAAGTAACAAACTCATCGACACAGGAAGGTACCGTAATATC
ATGGACATGAATTCTGGACTTGGAGGTTTTGCTGCTGCTCTTCAATCTCCCAAGTTGTGG
GTTATGAATGTTATGCCTACGATAGCCGAGAAAAATACCTTGGGAGTCATATATGAACGT
GGACTTATTGGAATTTATCATGACTGGTGTGAAGCATTCTCTACGTACCCAAGGACTTAT
GATCTCATTCATGCTAATGGTCTTTTCAGTTTATACAAGGACAGGTGCGACTTTGAAGAC
ATTCTCTTAGAAATGGACCGTATTTTGCGGCCAGAAGGAGCTGTTATTCTGAGAGATGAC
GTAGATGTTCTAATTAAGGTAAAGAAGATAATAGGAGGTATGAGATGGGACTTCAAATTG
ATGGATCATGAAGACGGCCCCCTTGTTCCCGTAAAAATACTGGTAGCAGTCAAACAATAC
TGGACTGTGGAGGATAATAATTCCACATCCACACGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400011595
PEP Infomation

pacid=37437228 transcript=PGSC0003DMT400016775 locus=PGSC0003DMG400006560 ID=PGSC0003DMT400016775.v4.03 annot-version=v4.03
Sequence

MANKSLGDNRTRTSVSIFIVAGLCCFFYLLGSWQRSGVGKGDSIALAVTKSGENCNILPN
LNFETRHGGQAGSIDDSGTEVKKFKPCRPRYTDHTPCQDQKRAMHFPRENMIYRERHCPP
PEKKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGG
GTQFPQGADKYIDQLASVIPIQNGTVRTALDTGCGVASWGAYLWKRNVIAMSFAPRDSHE
AQVQFALERGVPAVIGVLGTVKMPYPSRAFDMAHCSRCLIPWGAADGILMMEVDRVLRPG
GYWVLSGPPINWKTNYKAWQRPMEDLQEEQRKIEEIAKLLCWEKKSEKGETAIWQKRMDA
DSCRSTQEDSEATLCKSTDPDDVWYNKMETCITPSKGNGDDEGLRPFPERLFAVPPRIAN
GLVSGVSVEAYLEDSKKWKKHVSAYKKSNKLIDTGRYRNIMDMNSGLGGFAAALQSPKLW
VMNVMPTIAEKNTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYKDRCDFED
ILLEMDRILRPEGAVILRDDVDVLIKVKKIIGGMRWDFKLMDHEDGPLVPVKILVAVKQY
WTVEDNNSTSTR*

Transcript Sequence

Transcript ID

PGSC0003DMT400016775
Transcript Infomation

pacid=37437228 locus=PGSC0003DMG400006560 ID=PGSC0003DMT400016775.v4.03 annot-version=v4.03
Sequence

ATGGCAAACAAAAGCTTGGGGGACAATAGGACCAGGACTTCTGTGTCAATATTTATTGTA
GCCGGTCTCTGTTGCTTCTTCTATTTGCTTGGATCATGGCAGAGAAGTGGCGTTGGGAAG
GGAGATAGTATAGCTCTGGCAGTCACCAAGAGTGGTGAGAACTGCAATATCCTACCAAAT
CTCAATTTTGAGACTCGTCATGGTGGCCAAGCAGGTAGTATTGATGATTCAGGAACAGAA
GTCAAAAAATTTAAGCCATGTCGTCCTCGTTACACTGATCATACACCATGTCAAGATCAA
AAGCGTGCTATGCACTTCCCAAGGGAAAATATGATCTATCGAGAAAGGCATTGTCCGCCT
CCAGAAAAGAAGTTGCATTGCCTTATTCCAGCACCTAAGGGGTATGTCACCCCATTTCCA
TGGCCAAAGAGTCGGGATTATGTTCCATATGCGAATGCCCCCTATAAGAGCTTGACGGTC
GAGAAGGCCATTCAGAACTGGATTCAGTATGAAGGTAATGTGTTTAGGTTCCCTGGAGGA
GGGACACAGTTTCCTCAAGGAGCAGATAAGTATATTGATCAGCTTGCTTCAGTAATCCCA
ATTCAAAATGGAACTGTTCGGACTGCTCTGGACACTGGTTGCGGGGTCGCAAGTTGGGGT
GCTTATCTCTGGAAAAGGAATGTCATCGCGATGTCATTTGCTCCACGAGACTCACATGAA
GCTCAGGTTCAGTTTGCTCTTGAAAGGGGTGTACCTGCTGTTATTGGCGTCCTAGGAACA
GTCAAAATGCCATATCCATCTAGGGCCTTTGATATGGCTCATTGTTCTCGCTGTCTAATC
CCATGGGGAGCTGCTGATGGAATCCTCATGATGGAAGTTGATAGAGTTCTTCGACCTGGT
GGCTACTGGGTGCTTTCTGGCCCTCCGATCAATTGGAAGACTAATTACAAGGCCTGGCAA
CGCCCCATGGAGGACCTTCAGGAAGAACAAAGGAAAATTGAAGAGATTGCCAAACTTCTT
TGCTGGGAGAAGAAATCTGAGAAGGGTGAGACTGCAATTTGGCAGAAAAGGATGGATGCC
GACTCATGCCGTTCTACACAAGAAGATTCTGAAGCTACACTTTGTAAATCGACAGATCCA
GATGATGTCTGGTACAACAAAATGGAAACATGCATAACACCAAGCAAAGGCAATGGTGAT
GATGAAGGTCTAAGACCATTCCCTGAGAGACTTTTTGCTGTTCCTCCAAGAATTGCTAAT
GGACTAGTTTCTGGAGTCTCCGTTGAGGCATATCTGGAAGACAGCAAGAAATGGAAGAAG
CATGTTAGTGCTTATAAGAAAAGTAACAAACTCATCGACACAGGAAGGTACCGTAATATC
ATGGACATGAATTCTGGACTTGGAGGTTTTGCTGCTGCTCTTCAATCTCCCAAGTTGTGG
GTTATGAATGTTATGCCTACGATAGCCGAGAAAAATACCTTGGGAGTCATATATGAACGT
GGACTTATTGGAATTTATCATGACTGGTGTGAAGCATTCTCTACGTACCCAAGGACTTAT
GATCTCATTCATGCTAATGGTCTTTTCAGTTTATACAAGGACAGGTGCGACTTTGAAGAC
ATTCTCTTAGAAATGGACCGTATTTTGCGGCCAGAAGGAGCTGTTATTCTGAGAGATGAC
GTAGATGTTCTAATTAAGGTAAAGAAGATAATAGGAGGTATGAGATGGGACTTCAAATTG
ATGGATCATGAAGACGGCCCCCTTGTTCCCGTAAAAATACTGGTAGCAGTCAAACAATAC
TGGACTGTGGAGGATAATAATTCCACATCCACACGATAA