Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016723
CDS Infomation

pacid=37465639 polypeptide=PGSC0003DMP400011566 locus=PGSC0003DMG400006539 ID=PGSC0003DMT400016723.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTCGGCTCCTCTTTCTCACACTTTCTGCACACTTCGATTGTCTTCTTCTTCT
TCTTCTAAAGCAGCAAGAACCTCAATTCCTCCTTTTGCTCAATGCACCCATCACAATTTC
TCTCTCAACAAACAATGTGAAACCACTAAATTTGCTCTATCTAGATGGAATCCAATAATA
GCGAACCATACCAGACGTTCCTCGGCGAAAACCTGCCTCTCATTCCAAGACTCTGCTCCG
GAAGCAAGTGATGACGAGGATAACCTCAGTGAATTGGAAATGTCAAAAGATGTAGCGGAT
GAGAAATATTCATCTAGATTGAAGCCCCTCATGCAAGTTTACAAGGAGGCCATCCTAGTC
GGAGATGTAAAGCTTATTTCTGAAATTGAGGCGGTCATATCCTCAGTAGATAAGGAGAGA
GATGACATGTCTCAAAAAGTATCTGCTTTATCAGCAGATATCAATTCTGGAAAGGAAAAA
TATATCCGTTTGCAAGCAGATTTTGATAATTATAGGAAAAGATCCGAGAATGAGAAATTA
AGAATTAGGACCAATGCTCAAGGGGAAATAATTGAGAGCCTCTTGCCCATGGTGGATAAC
TTTGAGAGAGCTAAGCGACAGATCAAACTAGAAACTGAGATGGAAAAGAAAATTGATGCA
AGCTACCAGGGAATATACAAACAATTCGTTGAGATAATGAGGAGTTTGCGCGTTGCTGTT
GTTCCAACTGTTGGCAAGCCATTTGATCCTGCGCTACACGAGGCTATTGCTCGTGAGGAA
TCTCAGGAATTTAGTGAGGGAATTGTAATTGAAGAATTTCGCCGTGGGTTTTTACTTGGA
GACCGCCTTCTAAGGCCAGCTATGGTTAAGGTTTCATCAGGACCTGGTAAAAGGGTACCC
TCTTCAGTCACGCAGAAATCTCCAGCAGCAACTGTCGGAGTTGATGAAAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400011566
PEP Infomation

pacid=37465639 transcript=PGSC0003DMT400016723 locus=PGSC0003DMG400006539 ID=PGSC0003DMT400016723.v4.03 annot-version=v4.03
Sequence

MAASAPLSHTFCTLRLSSSSSSKAARTSIPPFAQCTHHNFSLNKQCETTKFALSRWNPII
ANHTRRSSAKTCLSFQDSAPEASDDEDNLSELEMSKDVADEKYSSRLKPLMQVYKEAILV
GDVKLISEIEAVISSVDKERDDMSQKVSALSADINSGKEKYIRLQADFDNYRKRSENEKL
RIRTNAQGEIIESLLPMVDNFERAKRQIKLETEMEKKIDASYQGIYKQFVEIMRSLRVAV
VPTVGKPFDPALHEAIAREESQEFSEGIVIEEFRRGFLLGDRLLRPAMVKVSSGPGKRVP
SSVTQKSPAATVGVDES*

Transcript Sequence

Transcript ID

PGSC0003DMT400016723
Transcript Infomation

pacid=37465639 locus=PGSC0003DMG400006539 ID=PGSC0003DMT400016723.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTCGGCTCCTCTTTCTCACACTTTCTGCACACTTCGATTGTCTTCTTCTTCT
TCTTCTAAAGCAGCAAGAACCTCAATTCCTCCTTTTGCTCAATGCACCCATCACAATTTC
TCTCTCAACAAACAATGTGAAACCACTAAATTTGCTCTATCTAGATGGAATCCAATAATA
GCGAACCATACCAGACGTTCCTCGGCGAAAACCTGCCTCTCATTCCAAGACTCTGCTCCG
GAAGCAAGTGATGACGAGGATAACCTCAGTGAATTGGAAATGTCAAAAGATGTAGCGGAT
GAGAAATATTCATCTAGATTGAAGCCCCTCATGCAAGTTTACAAGGAGGCCATCCTAGTC
GGAGATGTAAAGCTTATTTCTGAAATTGAGGCGGTCATATCCTCAGTAGATAAGGAGAGA
GATGACATGTCTCAAAAAGTATCTGCTTTATCAGCAGATATCAATTCTGGAAAGGAAAAA
TATATCCGTTTGCAAGCAGATTTTGATAATTATAGGAAAAGATCCGAGAATGAGAAATTA
AGAATTAGGACCAATGCTCAAGGGGAAATAATTGAGAGCCTCTTGCCCATGGTGGATAAC
TTTGAGAGAGCTAAGCGACAGATCAAACTAGAAACTGAGATGGAAAAGAAAATTGATGCA
AGCTACCAGGGAATATACAAACAATTCGTTGAGATAATGAGGAGTTTGCGCGTTGCTGTT
GTTCCAACTGTTGGCAAGCCATTTGATCCTGCGCTACACGAGGCTATTGCTCGTGAGGAA
TCTCAGGAATTTAGTGAGGGAATTGTAATTGAAGAATTTCGCCGTGGGTTTTTACTTGGA
GACCGCCTTCTAAGGCCAGCTATGGTTAAGGTTTCATCAGGACCTGGTAAAAGGGTACCC
TCTTCAGTCACGCAGAAATCTCCAGCAGCAACTGTCGGAGTTGATGAAAGCTAG