Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016719
CDS Infomation

pacid=37475082 polypeptide=PGSC0003DMP400011563 locus=PGSC0003DMG400006535 ID=PGSC0003DMT400016719.v4.03 annot-version=v4.03
Sequence

ATGCATCAATTAAGCGACAAAAAGGAAACAAATGATCCATCAGAGTCGCAAACAAAGAAA
TGTATAAATCAAATTTTTGCTAAAATGTTTGAGGATTTGGACAAATCATCTTTTAAATCG
TGTACCATATTCAAAGTAAATGTGCGGCTACGTGAATCAAATCCAGATGCTTATACACCG
AAGATGGTCTCTATTGGTCCTTACCATAGGAAAAATCCTCAACTTCGTCCAATGGAAAAG
TACAAATTATTATACCTACGACGGTTTCTGAAACGAAGAGAGGGGTTCGATGTGAAATAT
TGGATCGGTAAATTGGAGGAACTGAAGGAGGAAGCACTAAAATGTTACGACGATATAGAA
GGCCTCGATACTGATAATCGTCATGAATTTTGCAAGATGTTGTTGCTTGATGGTTGTTTT
GTGGTTGAATTTATTCGTGAGTGTTCTGAAAAATATGCAGAAGAAGGAGAAGACAAAATT
ATCAATTTTGTTGATTACAAATATAATCAAATACTTCGGGACTTGTTGTTACTAGAAAAC
CAACTTCCTTTCTTTATCCTCGACCAGCTTCATTCCTGGACAGCGAAACATGATGAATTA
CAATTGGAAGAACTGGCGATCACTTTGTTTAGCCATGTTGTTAACTTGGGATATATGTCA
GTAACCGGTGTTTCGTGTCTGATGAATTTATTTCTATTTGAACGTGATATGAAACATTTA
CTTCAATTAGTACACACTGTTTCATGTCCGAGGAATTTCGAGAAATCGTCAAACGACAAT
GACACCAAGTGGAATAAGGTCATGCCAAATGCAACAGAGCTTTCTGAAGCTGGAGTTAGA
TTTGCAAAGTTCAATCAGACGACAAGTTTATTTGATATAAAGTTTGAGAATGGATTGATG
ACAATACCGTCTCTTGACGTGGTAGATGGTACCGAAACCCTCCTGCGAAATCTCATTGCT
TATGAGCAACAATCAATTGATTTACAATATTTATATTTCAGTGATTATGCAATTTTTATG
GATCAATTGATCGACACAGATAAAGATGTGAGTTTGCTTCGCCATAAAGGAATCATAGCA
AACTGGATAGGAGAGGACAAAGAAGTGGCTAGCCTCTTCAACAAAATGGGAAACGGGGTC
ACAGTTTATTCCAACTTCTATTACAAAGAAGTATTCACAAAAGCAGTTAAACATTGTGAT
GAAAAACCATGGAACAGAATGAAGGCAAGTTTGAAGCACAATTATTTTAGTAGTCCTTGG
GTAGGAGCTTCAACTATGACAGTCATCATACTCCTCATACTCACAACTATACAGACTATT
CTAGCTATCATAAGTGCCTTTAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011563
PEP Infomation

pacid=37475082 transcript=PGSC0003DMT400016719 locus=PGSC0003DMG400006535 ID=PGSC0003DMT400016719.v4.03 annot-version=v4.03
Sequence

MHQLSDKKETNDPSESQTKKCINQIFAKMFEDLDKSSFKSCTIFKVNVRLRESNPDAYTP
KMVSIGPYHRKNPQLRPMEKYKLLYLRRFLKRREGFDVKYWIGKLEELKEEALKCYDDIE
GLDTDNRHEFCKMLLLDGCFVVEFIRECSEKYAEEGEDKIINFVDYKYNQILRDLLLLEN
QLPFFILDQLHSWTAKHDELQLEELAITLFSHVVNLGYMSVTGVSCLMNLFLFERDMKHL
LQLVHTVSCPRNFEKSSNDNDTKWNKVMPNATELSEAGVRFAKFNQTTSLFDIKFENGLM
TIPSLDVVDGTETLLRNLIAYEQQSIDLQYLYFSDYAIFMDQLIDTDKDVSLLRHKGIIA
NWIGEDKEVASLFNKMGNGVTVYSNFYYKEVFTKAVKHCDEKPWNRMKASLKHNYFSSPW
VGASTMTVIILLILTTIQTILAIISAFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400016719
Transcript Infomation

pacid=37475082 locus=PGSC0003DMG400006535 ID=PGSC0003DMT400016719.v4.03 annot-version=v4.03
Sequence

ATGCATCAATTAAGCGACAAAAAGGAAACAAATGATCCATCAGAGTCGCAAACAAAGAAA
TGTATAAATCAAATTTTTGCTAAAATGTTTGAGGATTTGGACAAATCATCTTTTAAATCG
TGTACCATATTCAAAGTAAATGTGCGGCTACGTGAATCAAATCCAGATGCTTATACACCG
AAGATGGTCTCTATTGGTCCTTACCATAGGAAAAATCCTCAACTTCGTCCAATGGAAAAG
TACAAATTATTATACCTACGACGGTTTCTGAAACGAAGAGAGGGGTTCGATGTGAAATAT
TGGATCGGTAAATTGGAGGAACTGAAGGAGGAAGCACTAAAATGTTACGACGATATAGAA
GGCCTCGATACTGATAATCGTCATGAATTTTGCAAGATGTTGTTGCTTGATGGTTGTTTT
GTGGTTGAATTTATTCGTGAGTGTTCTGAAAAATATGCAGAAGAAGGAGAAGACAAAATT
ATCAATTTTGTTGATTACAAATATAATCAAATACTTCGGGACTTGTTGTTACTAGAAAAC
CAACTTCCTTTCTTTATCCTCGACCAGCTTCATTCCTGGACAGCGAAACATGATGAATTA
CAATTGGAAGAACTGGCGATCACTTTGTTTAGCCATGTTGTTAACTTGGGATATATGTCA
GTAACCGGTGTTTCGTGTCTGATGAATTTATTTCTATTTGAACGTGATATGAAACATTTA
CTTCAATTAGTACACACTGTTTCATGTCCGAGGAATTTCGAGAAATCGTCAAACGACAAT
GACACCAAGTGGAATAAGGTCATGCCAAATGCAACAGAGCTTTCTGAAGCTGGAGTTAGA
TTTGCAAAGTTCAATCAGACGACAAGTTTATTTGATATAAAGTTTGAGAATGGATTGATG
ACAATACCGTCTCTTGACGTGGTAGATGGTACCGAAACCCTCCTGCGAAATCTCATTGCT
TATGAGCAACAATCAATTGATTTACAATATTTATATTTCAGTGATTATGCAATTTTTATG
GATCAATTGATCGACACAGATAAAGATGTGAGTTTGCTTCGCCATAAAGGAATCATAGCA
AACTGGATAGGAGAGGACAAAGAAGTGGCTAGCCTCTTCAACAAAATGGGAAACGGGGTC
ACAGTTTATTCCAACTTCTATTACAAAGAAGTATTCACAAAAGCAGTTAAACATTGTGAT
GAAAAACCATGGAACAGAATGAAGGCAAGTTTGAAGCACAATTATTTTAGTAGTCCTTGG
GTAGGAGCTTCAACTATGACAGTCATCATACTCCTCATACTCACAACTATACAGACTATT
CTAGCTATCATAAGTGCCTTTAAGTAA