Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016707
CDS Infomation

pacid=37473110 polypeptide=PGSC0003DMP400011559 locus=PGSC0003DMG400006531 ID=PGSC0003DMT400016707.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGCCTTTGTATCATTTGCAGTTCAAAAATTGGGTGATCTACTCATACAACAA
GTTTCCCTGCGTAAAAATCTAAGAGAAGAAGTTACATGGCTGCGAAACGAGCTTCTCTTA
ATGCAGTCTTTCCTCAAAGATGCAGAACAAAAGCGAAGTGGAGATGAAAGAGTTGAACAA
TGGGTGCTTGAGATCAACTCTATTGCTTATGACGTTGTTGCTATACTCAAGACTTATAGC
ATCGAGGATGGTAAATGTGCTAGTTGTCTCAAGGTTTGCGCTTGCATCTGTAGGAAGAAA
TCCTACAATGTCGCCAAAGAGATCCAATCACTCAAGCAACGAGTCATGGATATCTCTGTC
AAGCGAGAGACTTATGATATTACAAATACTATCAATTATAATGCAGGAAAAGGGACAAGT
AATAAGGTTAGAACATTGAGGAGAACTACCTCATATGTGGATGACCAGGATTACATTTTT
GTTGGACTTCAAGATGTTGTACAAACATTGGTATATGAACTTCTCAAAGCAGAGCCTCGT
CGAAGCGTCCTCTCCATTTATGGAATGGGCGGTTTAGGCAAGACCACTCTTGCCAGAAAA
CTTTACATCAATCCTAATATAGCCTCTAGCTTCCCAACATGCGCTTGGATATGTGTTTCT
CAAGAGTACAACACAATGGATCTTCTTTCGACTATCATAAAATCCATCCAAGGTCGCACC
AAGGTAACTCTAGATTTGTTGGAAAGCATGCCAGAAGGAGATCTAGAAATTTATCTTCGT
GATCTATTAACAGAACGCAAATACCTTGTGGTGGTTGATGATGTACGGCAGAAAGAAGTA
TGGGAGAGATTGAAAAGAGCATTCCCGGATAGCAAGAATGGCAGCAGAGTCATTATTACC
ACGCCCAAAAAGGATGTCGCTGAAAGAGCGGATAACAGAGGTTTTGTCCATGAACTTCGT
TTCCTAACCCAAGAAGAAAGTTGGGATCTCTTTCGTAGGAAACTACTTGATGTTCAAGCA
ATGACCTTCACTATGGAGAGGGTAGCTAAGAATATGGTGGGAAAGTGTAGAGGCTTACCT
CTTGCAATTGTTGTATTGAGCGGACTACTTTCACATAAAAAGAGGCTAGATGAATGGCAA
AAGGTGAAAGATCACCTTTGGAAGAACAATGTTGAAGATGAATATATTGAAATCTCCAAC
ATACTATCATTAAGCTACAATGATTTGTCAACTGCGCTCAAGCAGTGTTTTCTCTACTTT
GGTATTTTTCCAGAAGATCAAGTGGTCAAGGCTGAAAACATAATACGGTTGTGGATGGCG
GAGGGTTTCATACCAAGAGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGCTACTTGAAT
GAGCTGATAAGACGAAGCTTGATACTAGTTGTACATACATTTTGGGAAAGAGTTACTGCA
TGTAGGGTTCATGATTTACTCCATGATCTTGCGATACAAGAGGCATTGAAAGTAAACTTC
TTTGGCATTTATGATCCAAAAAGACACTCCATATCCTCTTTATGTATCAGACATGTCATT
CATAGTCAAGGAGAAAGGTACCCCTCACTTGATCTTTCTAACTTAAAGTTGAGGTCAATT
ATGTTCTTCGATCGTAAGATTAGTCTTATAAATTTCAGTAGTGTGTTCCAACATCTCTAT
GTGTTATACTTGGAGATGTGTGTTGACAAGAATCCACATCCACATTTAGTTCCTGATGCC
ATAGGAAGTTTGTACCACCTCAAGTTCTTAAGATTGAGAGGTCGTATCCATGATCTTCCC
ACTTCCATTGGCAACCTCAAGAATCTACAGACACTTGTTGTCAATGGATACTCTTGCAAA
CTACCCCAAGAGACAGCTGACCTAATAAATCTAAGACATTTAGATGCTCGGTATTCAGAA
TCTCTGAAACATCTAAGCAAACTCACTAGCCTTCAAGTTCTTAAAGGCGTTTATTGTGAT
CAGTGGAAAGATGTTGACCCTGTTGATTTAGTCAACCTTCGAGAATTAACCATGTGTAGT
ATTTGGAACTCTTACTCCCTAAAGAACATTAGCAGCTTGAAAAACCTTAGCACTCTCAGA
TTGTTTTGTGAACGTGATGAATTATACACATCTCCATTCCCATCCCTTGAATTTCTTTAT
TCTTGTGAAAAGCTGCAGAAATTGTGGTTAAAAGGGAGAGTAGAGAAACTGCCTCTGTTT
CCAAATTCCATCACAATGATGGTTCTTTGGCAGTCAAGACTCATGGAGGATCCGATGCCT
ATTTTGGGAAAGTTGCCAAACCTAAAAGATCTCATATTACAAGAAGCTTATAAAGGAAAA
GAAATAATGTGCAGCGATAACACCTTCAGTCAACTAGAGTCCCTTCGTCTTTATGATCTT
TCAAACCTAGAACGATGGCATTTAGACACAAGTGCCATGTCTCTCATTAAAGGTCTTCAT
ATCCATGCTTGTCCAGAGCTGAAGGAGATTCCAAAGAGAATGAAAGATGTTGAAGAGAAA
TTAAATATGGTGGAGCTTTACAAGCATATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400011559
PEP Infomation

pacid=37473110 transcript=PGSC0003DMT400016707 locus=PGSC0003DMG400006531 ID=PGSC0003DMT400016707.v4.03 annot-version=v4.03
Sequence

MAEAFVSFAVQKLGDLLIQQVSLRKNLREEVTWLRNELLLMQSFLKDAEQKRSGDERVEQ
WVLEINSIAYDVVAILKTYSIEDGKCASCLKVCACICRKKSYNVAKEIQSLKQRVMDISV
KRETYDITNTINYNAGKGTSNKVRTLRRTTSYVDDQDYIFVGLQDVVQTLVYELLKAEPR
RSVLSIYGMGGLGKTTLARKLYINPNIASSFPTCAWICVSQEYNTMDLLSTIIKSIQGRT
KVTLDLLESMPEGDLEIYLRDLLTERKYLVVVDDVRQKEVWERLKRAFPDSKNGSRVIIT
TPKKDVAERADNRGFVHELRFLTQEESWDLFRRKLLDVQAMTFTMERVAKNMVGKCRGLP
LAIVVLSGLLSHKKRLDEWQKVKDHLWKNNVEDEYIEISNILSLSYNDLSTALKQCFLYF
GIFPEDQVVKAENIIRLWMAEGFIPRGEERMEDVAEGYLNELIRRSLILVVHTFWERVTA
CRVHDLLHDLAIQEALKVNFFGIYDPKRHSISSLCIRHVIHSQGERYPSLDLSNLKLRSI
MFFDRKISLINFSSVFQHLYVLYLEMCVDKNPHPHLVPDAIGSLYHLKFLRLRGRIHDLP
TSIGNLKNLQTLVVNGYSCKLPQETADLINLRHLDARYSESLKHLSKLTSLQVLKGVYCD
QWKDVDPVDLVNLRELTMCSIWNSYSLKNISSLKNLSTLRLFCERDELYTSPFPSLEFLY
SCEKLQKLWLKGRVEKLPLFPNSITMMVLWQSRLMEDPMPILGKLPNLKDLILQEAYKGK
EIMCSDNTFSQLESLRLYDLSNLERWHLDTSAMSLIKGLHIHACPELKEIPKRMKDVEEK
LNMVELYKHM*

Transcript Sequence

Transcript ID

PGSC0003DMT400016707
Transcript Infomation

pacid=37473110 locus=PGSC0003DMG400006531 ID=PGSC0003DMT400016707.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGCCTTTGTATCATTTGCAGTTCAAAAATTGGGTGATCTACTCATACAACAA
GTTTCCCTGCGTAAAAATCTAAGAGAAGAAGTTACATGGCTGCGAAACGAGCTTCTCTTA
ATGCAGTCTTTCCTCAAAGATGCAGAACAAAAGCGAAGTGGAGATGAAAGAGTTGAACAA
TGGGTGCTTGAGATCAACTCTATTGCTTATGACGTTGTTGCTATACTCAAGACTTATAGC
ATCGAGGATGGTAAATGTGCTAGTTGTCTCAAGGTTTGCGCTTGCATCTGTAGGAAGAAA
TCCTACAATGTCGCCAAAGAGATCCAATCACTCAAGCAACGAGTCATGGATATCTCTGTC
AAGCGAGAGACTTATGATATTACAAATACTATCAATTATAATGCAGGAAAAGGGACAAGT
AATAAGGTTAGAACATTGAGGAGAACTACCTCATATGTGGATGACCAGGATTACATTTTT
GTTGGACTTCAAGATGTTGTACAAACATTGGTATATGAACTTCTCAAAGCAGAGCCTCGT
CGAAGCGTCCTCTCCATTTATGGAATGGGCGGTTTAGGCAAGACCACTCTTGCCAGAAAA
CTTTACATCAATCCTAATATAGCCTCTAGCTTCCCAACATGCGCTTGGATATGTGTTTCT
CAAGAGTACAACACAATGGATCTTCTTTCGACTATCATAAAATCCATCCAAGGTCGCACC
AAGGTAACTCTAGATTTGTTGGAAAGCATGCCAGAAGGAGATCTAGAAATTTATCTTCGT
GATCTATTAACAGAACGCAAATACCTTGTGGTGGTTGATGATGTACGGCAGAAAGAAGTA
TGGGAGAGATTGAAAAGAGCATTCCCGGATAGCAAGAATGGCAGCAGAGTCATTATTACC
ACGCCCAAAAAGGATGTCGCTGAAAGAGCGGATAACAGAGGTTTTGTCCATGAACTTCGT
TTCCTAACCCAAGAAGAAAGTTGGGATCTCTTTCGTAGGAAACTACTTGATGTTCAAGCA
ATGACCTTCACTATGGAGAGGGTAGCTAAGAATATGGTGGGAAAGTGTAGAGGCTTACCT
CTTGCAATTGTTGTATTGAGCGGACTACTTTCACATAAAAAGAGGCTAGATGAATGGCAA
AAGGTGAAAGATCACCTTTGGAAGAACAATGTTGAAGATGAATATATTGAAATCTCCAAC
ATACTATCATTAAGCTACAATGATTTGTCAACTGCGCTCAAGCAGTGTTTTCTCTACTTT
GGTATTTTTCCAGAAGATCAAGTGGTCAAGGCTGAAAACATAATACGGTTGTGGATGGCG
GAGGGTTTCATACCAAGAGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGCTACTTGAAT
GAGCTGATAAGACGAAGCTTGATACTAGTTGTACATACATTTTGGGAAAGAGTTACTGCA
TGTAGGGTTCATGATTTACTCCATGATCTTGCGATACAAGAGGCATTGAAAGTAAACTTC
TTTGGCATTTATGATCCAAAAAGACACTCCATATCCTCTTTATGTATCAGACATGTCATT
CATAGTCAAGGAGAAAGGTACCCCTCACTTGATCTTTCTAACTTAAAGTTGAGGTCAATT
ATGTTCTTCGATCGTAAGATTAGTCTTATAAATTTCAGTAGTGTGTTCCAACATCTCTAT
GTGTTATACTTGGAGATGTGTGTTGACAAGAATCCACATCCACATTTAGTTCCTGATGCC
ATAGGAAGTTTGTACCACCTCAAGTTCTTAAGATTGAGAGGTCGTATCCATGATCTTCCC
ACTTCCATTGGCAACCTCAAGAATCTACAGACACTTGTTGTCAATGGATACTCTTGCAAA
CTACCCCAAGAGACAGCTGACCTAATAAATCTAAGACATTTAGATGCTCGGTATTCAGAA
TCTCTGAAACATCTAAGCAAACTCACTAGCCTTCAAGTTCTTAAAGGCGTTTATTGTGAT
CAGTGGAAAGATGTTGACCCTGTTGATTTAGTCAACCTTCGAGAATTAACCATGTGTAGT
ATTTGGAACTCTTACTCCCTAAAGAACATTAGCAGCTTGAAAAACCTTAGCACTCTCAGA
TTGTTTTGTGAACGTGATGAATTATACACATCTCCATTCCCATCCCTTGAATTTCTTTAT
TCTTGTGAAAAGCTGCAGAAATTGTGGTTAAAAGGGAGAGTAGAGAAACTGCCTCTGTTT
CCAAATTCCATCACAATGATGGTTCTTTGGCAGTCAAGACTCATGGAGGATCCGATGCCT
ATTTTGGGAAAGTTGCCAAACCTAAAAGATCTCATATTACAAGAAGCTTATAAAGGAAAA
GAAATAATGTGCAGCGATAACACCTTCAGTCAACTAGAGTCCCTTCGTCTTTATGATCTT
TCAAACCTAGAACGATGGCATTTAGACACAAGTGCCATGTCTCTCATTAAAGGTCTTCAT
ATCCATGCTTGTCCAGAGCTGAAGGAGATTCCAAAGAGAATGAAAGATGTTGAAGAGAAA
TTAAATATGGTGGAGCTTTACAAGCATATGTGA