Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016680
CDS Infomation

pacid=37433380 polypeptide=PGSC0003DMP400011547 locus=PGSC0003DMG400006520 ID=PGSC0003DMT400016680.v4.03 annot-version=v4.03
Sequence

ATGTTTGTTGATACAAGCCATTTGCCTCCTAAATTAGGAAACACTGTTCACTCGGATCCA
AACATATCAAGCTCACATATTGACGATGATGCGGATAATAATAATAGTAATTACAATGCA
AGACACAGCAGTTTCTCTGCGTATGAAGCGAATCGTCTTAGCGGTGAAGGGTCTCCTATG
ATGATGTCTCCATGGAACCAAGGGTCTCCATGGTCCAAATTTGATGAGGGTAACAATTCC
CAAAACAATAATATCCCTCAAATTAATGGACTTATTGGTTCACTTGTGCGGGAAGAGGGT
CACATTTATTCTTTGGCTACCAAAAACGATCTTCTTTACACAGGATCTGATAGCAAGAAT
ATACGTGTCTGGAAGAATCTCAAGGAATTTGCTGCTTTTAAATCAAATAGCGGACTTGTA
AAAGCCATCATCATCTCAGGAGAGAAAATATTCACTGGTCATCAAGATGGAAAAGTTCGT
GTTTGGAAGATCCAAACCAAGAATCCAGGTACCTACAAACGTGCTGGGACTTTGCCTAGT
TTCTTTGATATTTTCAAGGCATCCATTAGGCCTAGCAACTATGTCGAAGTCAAGAGAAAT
AGGAGTGGTTTATGGATCAAGCACGTTGACGCCATATCATGCTTGAGCATGGATCAAACC
CGAGGCCTTCTCTATTCAGCTTCATGGGACAGAACATTTAAGGTATGGAACGTTGATAAC
TCGAAATGCATAGAATCAGTGAAAGCACATGATGATGCAGTGAACTCAGTGGTTACGAGT
GTTGAAGGCATAGTGTATACAGGATCAGCTGATGGTACAGTGAAGGTTTGGCAGAGGGAA
AACTCAGGGAAACACCCAAAACATGTATTTGTTCAGACACTTTTGAATCAAGAATGTGCA
GTGACAGCATTAGTTGTTAGCAAATCTGGTTCAGTAGTTTACTGCGGTTCATCTGATGGT
GTTGTGAATTTCTGGGAACGAGAGAAGCAATTATCACATGGTGGAGTCTTAAAGGGACAC
AAATTGGCTATTTTATGCCTTGCAGCAGCTGGAAATTTGGTACTGAGTGGATCAGCTGAT
AAAACAATATGTGTTTGGAGAAGGGACAATAAGTCTATACACACATTGTTATCTGTATTG
ACTGGTCATAATGGGCCAGTGAAATGTCTAGCAGTAGAAGAAGATAAAGAATCCACTCAA
ACCGATCAGAAATGGGTCGTTTATAGTGGAAGTCTTGATAAATCTGTAAAGGTTTGGAGT
GTTTCAGAGAAGGCACCTATGATGATGCACAATAATATGAATGCAGATAATAATGTCTCC
TGGGATTCTGCTAAATATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400011547
PEP Infomation

pacid=37433380 transcript=PGSC0003DMT400016680 locus=PGSC0003DMG400006520 ID=PGSC0003DMT400016680.v4.03 annot-version=v4.03
Sequence

MFVDTSHLPPKLGNTVHSDPNISSSHIDDDADNNNSNYNARHSSFSAYEANRLSGEGSPM
MMSPWNQGSPWSKFDEGNNSQNNNIPQINGLIGSLVREEGHIYSLATKNDLLYTGSDSKN
IRVWKNLKEFAAFKSNSGLVKAIIISGEKIFTGHQDGKVRVWKIQTKNPGTYKRAGTLPS
FFDIFKASIRPSNYVEVKRNRSGLWIKHVDAISCLSMDQTRGLLYSASWDRTFKVWNVDN
SKCIESVKAHDDAVNSVVTSVEGIVYTGSADGTVKVWQRENSGKHPKHVFVQTLLNQECA
VTALVVSKSGSVVYCGSSDGVVNFWEREKQLSHGGVLKGHKLAILCLAAAGNLVLSGSAD
KTICVWRRDNKSIHTLLSVLTGHNGPVKCLAVEEDKESTQTDQKWVVYSGSLDKSVKVWS
VSEKAPMMMHNNMNADNNVSWDSAKY*

Transcript Sequence

Transcript ID

PGSC0003DMT400016680
Transcript Infomation

pacid=37433380 locus=PGSC0003DMG400006520 ID=PGSC0003DMT400016680.v4.03 annot-version=v4.03
Sequence

ATGTTTGTTGATACAAGCCATTTGCCTCCTAAATTAGGAAACACTGTTCACTCGGATCCA
AACATATCAAGCTCACATATTGACGATGATGCGGATAATAATAATAGTAATTACAATGCA
AGACACAGCAGTTTCTCTGCGTATGAAGCGAATCGTCTTAGCGGTGAAGGGTCTCCTATG
ATGATGTCTCCATGGAACCAAGGGTCTCCATGGTCCAAATTTGATGAGGGTAACAATTCC
CAAAACAATAATATCCCTCAAATTAATGGACTTATTGGTTCACTTGTGCGGGAAGAGGGT
CACATTTATTCTTTGGCTACCAAAAACGATCTTCTTTACACAGGATCTGATAGCAAGAAT
ATACGTGTCTGGAAGAATCTCAAGGAATTTGCTGCTTTTAAATCAAATAGCGGACTTGTA
AAAGCCATCATCATCTCAGGAGAGAAAATATTCACTGGTCATCAAGATGGAAAAGTTCGT
GTTTGGAAGATCCAAACCAAGAATCCAGGTACCTACAAACGTGCTGGGACTTTGCCTAGT
TTCTTTGATATTTTCAAGGCATCCATTAGGCCTAGCAACTATGTCGAAGTCAAGAGAAAT
AGGAGTGGTTTATGGATCAAGCACGTTGACGCCATATCATGCTTGAGCATGGATCAAACC
CGAGGCCTTCTCTATTCAGCTTCATGGGACAGAACATTTAAGGTATGGAACGTTGATAAC
TCGAAATGCATAGAATCAGTGAAAGCACATGATGATGCAGTGAACTCAGTGGTTACGAGT
GTTGAAGGCATAGTGTATACAGGATCAGCTGATGGTACAGTGAAGGTTTGGCAGAGGGAA
AACTCAGGGAAACACCCAAAACATGTATTTGTTCAGACACTTTTGAATCAAGAATGTGCA
GTGACAGCATTAGTTGTTAGCAAATCTGGTTCAGTAGTTTACTGCGGTTCATCTGATGGT
GTTGTGAATTTCTGGGAACGAGAGAAGCAATTATCACATGGTGGAGTCTTAAAGGGACAC
AAATTGGCTATTTTATGCCTTGCAGCAGCTGGAAATTTGGTACTGAGTGGATCAGCTGAT
AAAACAATATGTGTTTGGAGAAGGGACAATAAGTCTATACACACATTGTTATCTGTATTG
ACTGGTCATAATGGGCCAGTGAAATGTCTAGCAGTAGAAGAAGATAAAGAATCCACTCAA
ACCGATCAGAAATGGGTCGTTTATAGTGGAAGTCTTGATAAATCTGTAAAGGTTTGGAGT
GTTTCAGAGAAGGCACCTATGATGATGCACAATAATATGAATGCAGATAATAATGTCTCC
TGGGATTCTGCTAAATATTGA