Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016672
CDS Infomation

pacid=37440339 polypeptide=PGSC0003DMP400011542 locus=PGSC0003DMG400006516 ID=PGSC0003DMT400016672.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTGGTAAAGTGACAGTTGTGGCTTTGCTACTTTGCCTCGCCGTAGGGGTAATA
GCTGAGGACCCTTACCTCTACTTTAACTGGAACGTTACCTATGGCACAGTCTCTCCATTG
GGCGTGCCACAACAAGGTATTCTCATCAATGGCCAGTTCCCTGGGCCTAGAATTAATTGT
ACCTCCAACAACAACATTGTCGTCAATGTCTTCAATAATTTGGACGAGCCATTCCTCTTC
ACCTGGAATGGTGTCCAACATAGGAAGAACTCATGGCAAGATGGTACCCCAGGAACCATG
TGCCCAATCATGCCTGGTCAAAATTTTACCTACCGATTCCAGGTCAAGGACCAGATTGGT
AGCTACTACTACTTCCCAACCACAGCTTTGCACCGAGCAGCAGGTGGTTACGGTCCCATC
AATGTCCACAGTCGTGCTCTCATCCCTGTTCCTTTTGACAATCCTGCCGATGAGTACAAT
GTGTTTGTCGGTGATTGGTACAACAAGGGCCACAAGACTTTGAAAAAGGTTTTGGATGGT
GGACACACCGTTGGCAGACCTGATGGCATTATCATCAATGGTAAATCTGCTAAGGTTGGA
GAGGCAAAAGAGCCACTCTTTACCATGGAGGCTGGCAAGACCTATAGGTACAGGTTCTGT
AACCTTGGCATGAGGTCCTCAGTCAACGTTAGATTCCAAGGTCACCCAATGAAATTAGTC
GAGCTAGAGGGATCCCACACCGTACAAAACATCTACGATTCATTGGATCTCCATGTTGGT
CAGTGCCTCTCAGTATTGGTGACTGCTGATCAGGAGCCCAAGGACTACTACTTGGTTGTT
TCAAGCAGGTTCTTGAAGCAAGAACTCTCCTCTGTGGCCATCATCCGTTATGCCAATGGA
AAGGGTCCAGCATCTCCTGAGCTCCCAGCATCCCCACCAGACAACACTGAAGGCATTGCT
TGGTCCATGAACCAGTTCCGCTCCTTCAGATGGAACTTAACCGCTAGTGCTGCCCGACCC
AACCCTCAGGGTTCCTACCATTACGGACAGATCAACATCACCCGCACCATCAAGATCATC
AACTCTATGGGCCAAGTAAATGGTAAGCTTAGATATGGTTTGAACGGTATCTCTCACTCA
GATACCGAAACTCCATTGAAGCTTGTAGAGTACTTTGGAGCTGCCGATAAGACCTTCAAG
TATGATCTCATGGCTGATGAAGCCCCAGCTGACCCAAGCAAGCTAACTGTTGCCCCAAAT
GTGAAAAACGCCACCTACCGTAACTTTGTGGAGATCATCTTTGAGAACCACGAGAAGAGC
ATCAGGACCTATCACCTTGATGGATATTCCTTCTTTGCAGTGGCTGTTGAGCCAGGGAAG
TGGAGCGCAGAGAAGAGAAAGAACTACAACTTAGTGGACGCAACAAGCAGGAACAACATC
CAGGTGTATCCAAACTCATGGGCAGCAATAATGTTGACATTTGACAATGCAGGAATGTGG
AACTTAAGATCAGAGATGTGGGAGAAGACTTATTTGGGAGAGCAATTGTACTTCAGCGTT
CTCTCACCAGGCCGCTCCTTGAGAGATGAATACAACCTCCCAGATAACCATCCTCTCTGC
GGTGTTGTCAAGGGCATGCCCCTCCCAACTCCATACAAGGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011542
PEP Infomation

pacid=37440339 transcript=PGSC0003DMT400016672 locus=PGSC0003DMG400006516 ID=PGSC0003DMT400016672.v4.03 annot-version=v4.03
Sequence

MGSGKVTVVALLLCLAVGVIAEDPYLYFNWNVTYGTVSPLGVPQQGILINGQFPGPRINC
TSNNNIVVNVFNNLDEPFLFTWNGVQHRKNSWQDGTPGTMCPIMPGQNFTYRFQVKDQIG
SYYYFPTTALHRAAGGYGPINVHSRALIPVPFDNPADEYNVFVGDWYNKGHKTLKKVLDG
GHTVGRPDGIIINGKSAKVGEAKEPLFTMEAGKTYRYRFCNLGMRSSVNVRFQGHPMKLV
ELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPKDYYLVVSSRFLKQELSSVAIIRYANG
KGPASPELPASPPDNTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKII
NSMGQVNGKLRYGLNGISHSDTETPLKLVEYFGAADKTFKYDLMADEAPADPSKLTVAPN
VKNATYRNFVEIIFENHEKSIRTYHLDGYSFFAVAVEPGKWSAEKRKNYNLVDATSRNNI
QVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPGRSLRDEYNLPDNHPLC
GVVKGMPLPTPYKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400016672
Transcript Infomation

pacid=37440339 locus=PGSC0003DMG400006516 ID=PGSC0003DMT400016672.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTGGTAAAGTGACAGTTGTGGCTTTGCTACTTTGCCTCGCCGTAGGGGTAATA
GCTGAGGACCCTTACCTCTACTTTAACTGGAACGTTACCTATGGCACAGTCTCTCCATTG
GGCGTGCCACAACAAGGTATTCTCATCAATGGCCAGTTCCCTGGGCCTAGAATTAATTGT
ACCTCCAACAACAACATTGTCGTCAATGTCTTCAATAATTTGGACGAGCCATTCCTCTTC
ACCTGGAATGGTGTCCAACATAGGAAGAACTCATGGCAAGATGGTACCCCAGGAACCATG
TGCCCAATCATGCCTGGTCAAAATTTTACCTACCGATTCCAGGTCAAGGACCAGATTGGT
AGCTACTACTACTTCCCAACCACAGCTTTGCACCGAGCAGCAGGTGGTTACGGTCCCATC
AATGTCCACAGTCGTGCTCTCATCCCTGTTCCTTTTGACAATCCTGCCGATGAGTACAAT
GTGTTTGTCGGTGATTGGTACAACAAGGGCCACAAGACTTTGAAAAAGGTTTTGGATGGT
GGACACACCGTTGGCAGACCTGATGGCATTATCATCAATGGTAAATCTGCTAAGGTTGGA
GAGGCAAAAGAGCCACTCTTTACCATGGAGGCTGGCAAGACCTATAGGTACAGGTTCTGT
AACCTTGGCATGAGGTCCTCAGTCAACGTTAGATTCCAAGGTCACCCAATGAAATTAGTC
GAGCTAGAGGGATCCCACACCGTACAAAACATCTACGATTCATTGGATCTCCATGTTGGT
CAGTGCCTCTCAGTATTGGTGACTGCTGATCAGGAGCCCAAGGACTACTACTTGGTTGTT
TCAAGCAGGTTCTTGAAGCAAGAACTCTCCTCTGTGGCCATCATCCGTTATGCCAATGGA
AAGGGTCCAGCATCTCCTGAGCTCCCAGCATCCCCACCAGACAACACTGAAGGCATTGCT
TGGTCCATGAACCAGTTCCGCTCCTTCAGATGGAACTTAACCGCTAGTGCTGCCCGACCC
AACCCTCAGGGTTCCTACCATTACGGACAGATCAACATCACCCGCACCATCAAGATCATC
AACTCTATGGGCCAAGTAAATGGTAAGCTTAGATATGGTTTGAACGGTATCTCTCACTCA
GATACCGAAACTCCATTGAAGCTTGTAGAGTACTTTGGAGCTGCCGATAAGACCTTCAAG
TATGATCTCATGGCTGATGAAGCCCCAGCTGACCCAAGCAAGCTAACTGTTGCCCCAAAT
GTGAAAAACGCCACCTACCGTAACTTTGTGGAGATCATCTTTGAGAACCACGAGAAGAGC
ATCAGGACCTATCACCTTGATGGATATTCCTTCTTTGCAGTGGCTGTTGAGCCAGGGAAG
TGGAGCGCAGAGAAGAGAAAGAACTACAACTTAGTGGACGCAACAAGCAGGAACAACATC
CAGGTGTATCCAAACTCATGGGCAGCAATAATGTTGACATTTGACAATGCAGGAATGTGG
AACTTAAGATCAGAGATGTGGGAGAAGACTTATTTGGGAGAGCAATTGTACTTCAGCGTT
CTCTCACCAGGCCGCTCCTTGAGAGATGAATACAACCTCCCAGATAACCATCCTCTCTGC
GGTGTTGTCAAGGGCATGCCCCTCCCAACTCCATACAAGGCTTAA