Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016647
CDS Infomation

pacid=37477452 polypeptide=PGSC0003DMP400011529 locus=PGSC0003DMG400006507 ID=PGSC0003DMT400016647.v4.03 annot-version=v4.03
Sequence

ATGTCTAAAGAAGAGAAGAAAATAGAAGTAACGAGTGCAGTTTACAAAGTTGGTCTTCAC
TGCCCAAAATGTGCACATGATATTAGAAAACCACTCTTGACAACTCAAGGAGTTCATAGT
GTGGATGTGAAATTCGAGAAAGATGAGGTTACAGTAAAAGGTGCTATTGACGCAAACAAA
ATTCACCAACGTTTACAGAAATGGACTAAAAACAAAGTCCACTTAGTATCACAGGCCAAG
ATTGAAAACGCAAACCAACTCAAAAAGGAAACTATTAAGACAACGACATTGAATGTTTAC
ATGCATTGCAACAAGTGTGAAGTTGATCTAGAGAGGAGGTTACTCAAACACAAAGGTATA
TATAGTGTTAAAACAAACTTCAAAGCTCAAACAATAACAGTTGAGACAATACTTGAGTCT
GAAAAACTTGTGACATATGTAACAAAAACATTTGGTAAACACGCAGAAATCGTAAAGAAG
AAAGAAGAGGAAAAGAAGGAAATAAAGAAAGAAAAAGTAAACATTGAAGAAAAAACTATT
GAATTTAAGGAATTGAAGAAAGTAGAGGCAAAAACCAAGGAAGGTGAAATTCCATACTTT
GTTCATTATGTATATTCCCCTCAGTGGTTCAGTGATGACAACCCTAACGCTTGTTATGTC
ATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400011529
PEP Infomation

pacid=37477452 transcript=PGSC0003DMT400016647 locus=PGSC0003DMG400006507 ID=PGSC0003DMT400016647.v4.03 annot-version=v4.03
Sequence

MSKEEKKIEVTSAVYKVGLHCPKCAHDIRKPLLTTQGVHSVDVKFEKDEVTVKGAIDANK
IHQRLQKWTKNKVHLVSQAKIENANQLKKETIKTTTLNVYMHCNKCEVDLERRLLKHKGI
YSVKTNFKAQTITVETILESEKLVTYVTKTFGKHAEIVKKKEEEKKEIKKEKVNIEEKTI
EFKELKKVEAKTKEGEIPYFVHYVYSPQWFSDDNPNACYVM*

Transcript Sequence

Transcript ID

PGSC0003DMT400016647
Transcript Infomation

pacid=37477452 locus=PGSC0003DMG400006507 ID=PGSC0003DMT400016647.v4.03 annot-version=v4.03
Sequence

ATGTCTAAAGAAGAGAAGAAAATAGAAGTAACGAGTGCAGTTTACAAAGTTGGTCTTCAC
TGCCCAAAATGTGCACATGATATTAGAAAACCACTCTTGACAACTCAAGGAGTTCATAGT
GTGGATGTGAAATTCGAGAAAGATGAGGTTACAGTAAAAGGTGCTATTGACGCAAACAAA
ATTCACCAACGTTTACAGAAATGGACTAAAAACAAAGTCCACTTAGTATCACAGGCCAAG
ATTGAAAACGCAAACCAACTCAAAAAGGAAACTATTAAGACAACGACATTGAATGTTTAC
ATGCATTGCAACAAGTGTGAAGTTGATCTAGAGAGGAGGTTACTCAAACACAAAGGTATA
TATAGTGTTAAAACAAACTTCAAAGCTCAAACAATAACAGTTGAGACAATACTTGAGTCT
GAAAAACTTGTGACATATGTAACAAAAACATTTGGTAAACACGCAGAAATCGTAAAGAAG
AAAGAAGAGGAAAAGAAGGAAATAAAGAAAGAAAAAGTAAACATTGAAGAAAAAACTATT
GAATTTAAGGAATTGAAGAAAGTAGAGGCAAAAACCAAGGAAGGTGAAATTCCATACTTT
GTTCATTATGTATATTCCCCTCAGTGGTTCAGTGATGACAACCCTAACGCTTGTTATGTC
ATGTAG