Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016640
CDS Infomation

pacid=37479280 polypeptide=PGSC0003DMP400011525 locus=PGSC0003DMG400006504 ID=PGSC0003DMT400016640.v4.03 annot-version=v4.03
Sequence

ATGGAAAATAATAAGGAAGGGGAGGAAACTGCTCCTTCTAGAAATGAGTGGGAAGTCGTA
TCGCTCACACAGTCGGCATATGCTGCTGCCCCTGATTCAAGACAGGTTGATCTCGTTGAT
GATAGTAGTGCAGAGTTTGTAGCTGAAACTTCTGATCCAATGATTATGTCGGGGCACTTT
GGCTTTCCACCAAATCAGCATGAGAATGCGGCATTGCAACCATCTAATGATGAGATTCTC
AATGAGAAGGGAAGTGAAGATGCTACTCCTGAATTTGTTGCTGACAAAGGGGTTGATTCA
AATACAGATGAAGTGAGGCCAAAAACTAAAGGATTGAGCACAATGGAATTTCTCGGAGAT
CAAATGTTTGATGAAAAGGTTAGCATTTTATCCTTAAGTGGTGCAAAATTTGAAGAAGAT
GCAGTCTTGCAGGGGTCAAGTTTGGTGGACAAAGAGCAGAATTTCTTTAGTTCTACTACG
TTTAGTTCTTTCCATAGTGAAGAACCCATGGGTGTGTCAGCTTCCACAGAGGAAAGCAAT
ATGCTTGCAGAACCAGTTGAACTCGTTCACCAGGTTATTGATTCTGGCATATCTAATTTG
CCAAAGGCTAAAGATGAAGATAATGATGATGCAGAAAATCTTCCTTGTCAAGCATGGTGG
AAAAGACGGGCTGTTTCACTTCTTGCCCACGCAAAAGATGCCAACACATTCTGGTCCATT
TTCATTGCTGCAGCTGTTATGGGCCTCGTGGTTATTGGTCAGAGATGGCGGCTAGAAAGG
TGGCAGGTATTGCAAATGAAGTGGCAGTTTGGAGGCCATGATGAGATAATGAACAGGGCA
TTTATTAGTCCCATATCCCGATTGAAAGAAGTGATAATTGGGAGTAGTCGTCGTGGTTCC
TTTATCCGAGGGAATGCTTCAACACAACGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011525
PEP Infomation

pacid=37479280 transcript=PGSC0003DMT400016640 locus=PGSC0003DMG400006504 ID=PGSC0003DMT400016640.v4.03 annot-version=v4.03
Sequence

MENNKEGEETAPSRNEWEVVSLTQSAYAAAPDSRQVDLVDDSSAEFVAETSDPMIMSGHF
GFPPNQHENAALQPSNDEILNEKGSEDATPEFVADKGVDSNTDEVRPKTKGLSTMEFLGD
QMFDEKVSILSLSGAKFEEDAVLQGSSLVDKEQNFFSSTTFSSFHSEEPMGVSASTEESN
MLAEPVELVHQVIDSGISNLPKAKDEDNDDAENLPCQAWWKRRAVSLLAHAKDANTFWSI
FIAAAVMGLVVIGQRWRLERWQVLQMKWQFGGHDEIMNRAFISPISRLKEVIIGSSRRGS
FIRGNASTQR*

Transcript Sequence

Transcript ID

PGSC0003DMT400016640
Transcript Infomation

pacid=37479280 locus=PGSC0003DMG400006504 ID=PGSC0003DMT400016640.v4.03 annot-version=v4.03
Sequence

ATGGAAAATAATAAGGAAGGGGAGGAAACTGCTCCTTCTAGAAATGAGTGGGAAGTCGTA
TCGCTCACACAGTCGGCATATGCTGCTGCCCCTGATTCAAGACAGGTTGATCTCGTTGAT
GATAGTAGTGCAGAGTTTGTAGCTGAAACTTCTGATCCAATGATTATGTCGGGGCACTTT
GGCTTTCCACCAAATCAGCATGAGAATGCGGCATTGCAACCATCTAATGATGAGATTCTC
AATGAGAAGGGAAGTGAAGATGCTACTCCTGAATTTGTTGCTGACAAAGGGGTTGATTCA
AATACAGATGAAGTGAGGCCAAAAACTAAAGGATTGAGCACAATGGAATTTCTCGGAGAT
CAAATGTTTGATGAAAAGGTTAGCATTTTATCCTTAAGTGGTGCAAAATTTGAAGAAGAT
GCAGTCTTGCAGGGGTCAAGTTTGGTGGACAAAGAGCAGAATTTCTTTAGTTCTACTACG
TTTAGTTCTTTCCATAGTGAAGAACCCATGGGTGTGTCAGCTTCCACAGAGGAAAGCAAT
ATGCTTGCAGAACCAGTTGAACTCGTTCACCAGGTTATTGATTCTGGCATATCTAATTTG
CCAAAGGCTAAAGATGAAGATAATGATGATGCAGAAAATCTTCCTTGTCAAGCATGGTGG
AAAAGACGGGCTGTTTCACTTCTTGCCCACGCAAAAGATGCCAACACATTCTGGTCCATT
TTCATTGCTGCAGCTGTTATGGGCCTCGTGGTTATTGGTCAGAGATGGCGGCTAGAAAGG
TGGCAGGTATTGCAAATGAAGTGGCAGTTTGGAGGCCATGATGAGATAATGAACAGGGCA
TTTATTAGTCCCATATCCCGATTGAAAGAAGTGATAATTGGGAGTAGTCGTCGTGGTTCC
TTTATCCGAGGGAATGCTTCAACACAACGTTAA