Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016555
CDS Infomation

pacid=37448012 polypeptide=PGSC0003DMP400011476 locus=PGSC0003DMG402006465 ID=PGSC0003DMT400016555.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGATAAGGCAGCTTTTGTTGGGAATAGCATTAGTGAAGAAAAGACTGTGTTT
TCAGAAATGGAAGTGGAAACTGCTGACATGGAAATATCTGATCGGAACGATGAGAATGTA
GTTTTGCCGTCTGAGAAAGGTGAGGGAAGTAATGGAAATGTTGTATTTTCAAGAGAAGCT
CCACTTGTACATAAGGACTTCAGATCATCTGTCGTTGCAGGAGGTTGTAGTTGTGGAGTT
AATAAGATTAAATCAGGGATAGCTATCTCTGACTTGGAACTTGGGAAAAGTGAGAAATCA
GGTCTTGAAAAGAAGCTTAGCAGACAAAATAGGATTGAGTTGGGGCGCTTGTTCCAGGGT
GCTGTGAGTGACCATGATTGGGAGTTGGCTGAGAGTTTGATCCTATTGGCTGATCCCCAG
ACACTGAATGATGCGTTATGCATTGGTTTGGATTCAATCTGGTTCTTAAGTAATCAAGAT
GAGTTGTACGGGATAACAGGTTTGATTAAAAAGATCATCGCTAATGGTGCATACGACTTC
ACTCGGGCTGCACTAAGGACTTCATTTCTTGCTTCGTGTGTTTCTGCTTGCCAGAGTCGA
ACAATGGGCCTTGCAGATACTGTCACTGTAATGGCACAAAGGTTGCATGAACGACTACAA
GAATGCAGCGGAGATGAAATCTTGAAGGCTGAAGCTGGTGCTAAGGTTCAGAAGTTCACT
GAATGGGCTCTTAAATGTATAGGTTTCCATTCCCGCTGCCAAGGAAAGAGAGATACGGTT
GGGCATAACTCTGCTGTTGAAATACAATTGCAGTTATCAGCTTTCAAAACTTTCCTGGAT
CTTGCCGGCAACCACCTTACTGGGAAGGACTTTACAGAAGCATTTGATGCAGCTTGCTTT
CCGCTTACACTATTCTCTAGTTCATTTGATACTTGCTGGGCATCAGGAATTTCAGCTACT
GCAATCCAAGGATTGCTCGGCATGTTGGTGGATGGGGGTGCCGACAATGTCAATCAGTGC
TTTCTTGAAGCATCGCGTTTTGGGAGCACAGAGCTGGTCCGCATTCTTTTGCAGATTGCT
CAAAGGAACAGCTTGGATGTTGATGTTGAACTGGCTTTGGGGTTTGCTTCCCATTACAGT
AAAATTGGAACCATGGAATGTTTAGTGGAAGAGGGGAATGCAATGTCTTTCTTGGGCCCT
CTGATGAGAGCTGCTGAGAGGGGATGCATGCAGGTTGTTGAATGGTTTGTCAAAAGGGGA
TGCAGGGACATGGAACTATGCCTGGCTCTTACAGCTGCGACCTCCAGTAGTCAGGTTGCA
GTTGCCGCGTATCTCCTTCCTCACGTACCTAAGCATGTTCTTGCTGCCCTCAGCATCGAG
ATTCTTAAGGCTGCTGGTGAGAGAAGCAGTGGGTCTCTTGATGGGGTAGCATTTCTTCTG
CATTCAGACTTCCTCGGTGATCCTGTTGCCACTTATGCTGTTGCCGACAGTATAGCTAAG
TCTGATGATGATGCTGTTGCTCCTGGTCTGAGGAGTTTCCTTCGGGAACATTGGTCGGAA
GCTGCCTTCTCAGATGGACTGCAGCAAGGAAAAGAACACTACTTAAACTTTGTGCGTATT
GTAAACTGTGGTGAATCTCCTATCTGTTTGAAGGATCTTCCTGGGCCCTTGAGGGTAGCA
ATAGCATACCTGCCACTGTATAGAGAAAGTGTCAAGGTAGGGGGATGTTGCTTGTTATCT
CAAAGACTTAGAGGACAGCTTGTGGAAGCAGCCAAAAGGCTTGGTGGTGTAGTACTGGAA
GAGGCAAACCAAGGAAAAGAATTAGTGGCTGTCTTGGAGCATCATCTTCCACCATTTTTG
CTAAATGCATCAAGTGCTGCTTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400011476
PEP Infomation

pacid=37448012 transcript=PGSC0003DMT400016555 locus=PGSC0003DMG402006465 ID=PGSC0003DMT400016555.v4.03 annot-version=v4.03
Sequence

MEEDKAAFVGNSISEEKTVFSEMEVETADMEISDRNDENVVLPSEKGEGSNGNVVFSREA
PLVHKDFRSSVVAGGCSCGVNKIKSGIAISDLELGKSEKSGLEKKLSRQNRIELGRLFQG
AVSDHDWELAESLILLADPQTLNDALCIGLDSIWFLSNQDELYGITGLIKKIIANGAYDF
TRAALRTSFLASCVSACQSRTMGLADTVTVMAQRLHERLQECSGDEILKAEAGAKVQKFT
EWALKCIGFHSRCQGKRDTVGHNSAVEIQLQLSAFKTFLDLAGNHLTGKDFTEAFDAACF
PLTLFSSSFDTCWASGISATAIQGLLGMLVDGGADNVNQCFLEASRFGSTELVRILLQIA
QRNSLDVDVELALGFASHYSKIGTMECLVEEGNAMSFLGPLMRAAERGCMQVVEWFVKRG
CRDMELCLALTAATSSSQVAVAAYLLPHVPKHVLAALSIEILKAAGERSSGSLDGVAFLL
HSDFLGDPVATYAVADSIAKSDDDAVAPGLRSFLREHWSEAAFSDGLQQGKEHYLNFVRI
VNCGESPICLKDLPGPLRVAIAYLPLYRESVKVGGCCLLSQRLRGQLVEAAKRLGGVVLE
EANQGKELVAVLEHHLPPFLLNASSAAY*

Transcript Sequence

Transcript ID

PGSC0003DMT400016555
Transcript Infomation

pacid=37448012 locus=PGSC0003DMG402006465 ID=PGSC0003DMT400016555.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGATAAGGCAGCTTTTGTTGGGAATAGCATTAGTGAAGAAAAGACTGTGTTT
TCAGAAATGGAAGTGGAAACTGCTGACATGGAAATATCTGATCGGAACGATGAGAATGTA
GTTTTGCCGTCTGAGAAAGGTGAGGGAAGTAATGGAAATGTTGTATTTTCAAGAGAAGCT
CCACTTGTACATAAGGACTTCAGATCATCTGTCGTTGCAGGAGGTTGTAGTTGTGGAGTT
AATAAGATTAAATCAGGGATAGCTATCTCTGACTTGGAACTTGGGAAAAGTGAGAAATCA
GGTCTTGAAAAGAAGCTTAGCAGACAAAATAGGATTGAGTTGGGGCGCTTGTTCCAGGGT
GCTGTGAGTGACCATGATTGGGAGTTGGCTGAGAGTTTGATCCTATTGGCTGATCCCCAG
ACACTGAATGATGCGTTATGCATTGGTTTGGATTCAATCTGGTTCTTAAGTAATCAAGAT
GAGTTGTACGGGATAACAGGTTTGATTAAAAAGATCATCGCTAATGGTGCATACGACTTC
ACTCGGGCTGCACTAAGGACTTCATTTCTTGCTTCGTGTGTTTCTGCTTGCCAGAGTCGA
ACAATGGGCCTTGCAGATACTGTCACTGTAATGGCACAAAGGTTGCATGAACGACTACAA
GAATGCAGCGGAGATGAAATCTTGAAGGCTGAAGCTGGTGCTAAGGTTCAGAAGTTCACT
GAATGGGCTCTTAAATGTATAGGTTTCCATTCCCGCTGCCAAGGAAAGAGAGATACGGTT
GGGCATAACTCTGCTGTTGAAATACAATTGCAGTTATCAGCTTTCAAAACTTTCCTGGAT
CTTGCCGGCAACCACCTTACTGGGAAGGACTTTACAGAAGCATTTGATGCAGCTTGCTTT
CCGCTTACACTATTCTCTAGTTCATTTGATACTTGCTGGGCATCAGGAATTTCAGCTACT
GCAATCCAAGGATTGCTCGGCATGTTGGTGGATGGGGGTGCCGACAATGTCAATCAGTGC
TTTCTTGAAGCATCGCGTTTTGGGAGCACAGAGCTGGTCCGCATTCTTTTGCAGATTGCT
CAAAGGAACAGCTTGGATGTTGATGTTGAACTGGCTTTGGGGTTTGCTTCCCATTACAGT
AAAATTGGAACCATGGAATGTTTAGTGGAAGAGGGGAATGCAATGTCTTTCTTGGGCCCT
CTGATGAGAGCTGCTGAGAGGGGATGCATGCAGGTTGTTGAATGGTTTGTCAAAAGGGGA
TGCAGGGACATGGAACTATGCCTGGCTCTTACAGCTGCGACCTCCAGTAGTCAGGTTGCA
GTTGCCGCGTATCTCCTTCCTCACGTACCTAAGCATGTTCTTGCTGCCCTCAGCATCGAG
ATTCTTAAGGCTGCTGGTGAGAGAAGCAGTGGGTCTCTTGATGGGGTAGCATTTCTTCTG
CATTCAGACTTCCTCGGTGATCCTGTTGCCACTTATGCTGTTGCCGACAGTATAGCTAAG
TCTGATGATGATGCTGTTGCTCCTGGTCTGAGGAGTTTCCTTCGGGAACATTGGTCGGAA
GCTGCCTTCTCAGATGGACTGCAGCAAGGAAAAGAACACTACTTAAACTTTGTGCGTATT
GTAAACTGTGGTGAATCTCCTATCTGTTTGAAGGATCTTCCTGGGCCCTTGAGGGTAGCA
ATAGCATACCTGCCACTGTATAGAGAAAGTGTCAAGGTAGGGGGATGTTGCTTGTTATCT
CAAAGACTTAGAGGACAGCTTGTGGAAGCAGCCAAAAGGCTTGGTGGTGTAGTACTGGAA
GAGGCAAACCAAGGAAAAGAATTAGTGGCTGTCTTGGAGCATCATCTTCCACCATTTTTG
CTAAATGCATCAAGTGCTGCTTATTAG