Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016535
CDS Infomation

pacid=37446803 polypeptide=PGSC0003DMP400011462 locus=PGSC0003DMG400006457 ID=PGSC0003DMT400016535.v4.03 annot-version=v4.03
Sequence

ATGGCTATGGAGGTTGCACCATCTTTTCCGACTTGGGAAGAAATTGAGCTTTCAGAAAAT
TATCTGGTGTGTTGTATGTTCCAAGAAGCAGCAGCTTTGTCTTCCTCAATTATTAAGCAA
TTAGTTGACAAAAATGCTAACACTAATGAACACAATTGCGAATTGGGTGATATGTTGGAA
TCAGCTGCAATGATTTTGGTGCAGTCCTACAAAGCGTTGGGGAGGACATCAGAAATACTG
AAACAGCTGAAAGTGCTATTTGGTTCAGTCACTGCTATTCCTGCCCAAGTTTTCCTTACT
GGGGTGTGTCTCCAGATACCAGATGGCCCTTCTGCTGAAGTTAAAGAAATTCTAGAGGAG
TTCCTTATGAAGTGGAGATATGTTGATGGAAAGTATTATACTATTGCAAACATGGAAGCT
GATGTATCTTACATGGAAGAATTTAGCAATCAGATTTCCCTTCGAGTGGATAAGTACCTG
GAAATTATTGAGCTCTATGTGATTACCTTTTTGGGGAGGATTCTAGGAAATTTTGATCTT
GCTATCTCTTGGGTTGAGAAATCCCCTCTATCTGACGAGAAGAGGCAGGATCTTTTGAGG
CAGTTGCACTCCATGAATACTTTAAAGCTTGGCAGCTCTTCGCAGTCCTCGGCATTACCT
CTCCAAATAGATGAATGTACAACTGATTCCACTTCCCTGATTGAAGAAAAATCATGCAAT
GGAACAGCAAATATTTTGGAACACAGAGACCAGTCTAAGGGAGAGAACACCACGAAACAA
TCAATTTTGGAGTTTTCTAGACGGAGAACTCCATTTTGGTGGTTTCGTACAATCACTTTG
AAGTTTGGAAGCAGTTGCTTGGTTTTATCAAATGGAAGCATCTTTCTTGGTTTTTTGGTG
TCACTTGTTTACTATATTGTGCGGAGAAAACAAGCCTCTCTATGGAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011462
PEP Infomation

pacid=37446803 transcript=PGSC0003DMT400016535 locus=PGSC0003DMG400006457 ID=PGSC0003DMT400016535.v4.03 annot-version=v4.03
Sequence

MAMEVAPSFPTWEEIELSENYLVCCMFQEAAALSSSIIKQLVDKNANTNEHNCELGDMLE
SAAMILVQSYKALGRTSEILKQLKVLFGSVTAIPAQVFLTGVCLQIPDGPSAEVKEILEE
FLMKWRYVDGKYYTIANMEADVSYMEEFSNQISLRVDKYLEIIELYVITFLGRILGNFDL
AISWVEKSPLSDEKRQDLLRQLHSMNTLKLGSSSQSSALPLQIDECTTDSTSLIEEKSCN
GTANILEHRDQSKGENTTKQSILEFSRRRTPFWWFRTITLKFGSSCLVLSNGSIFLGFLV
SLVYYIVRRKQASLWR*

Transcript Sequence

Transcript ID

PGSC0003DMT400016535
Transcript Infomation

pacid=37446803 locus=PGSC0003DMG400006457 ID=PGSC0003DMT400016535.v4.03 annot-version=v4.03
Sequence

ATGGCTATGGAGGTTGCACCATCTTTTCCGACTTGGGAAGAAATTGAGCTTTCAGAAAAT
TATCTGGTGTGTTGTATGTTCCAAGAAGCAGCAGCTTTGTCTTCCTCAATTATTAAGCAA
TTAGTTGACAAAAATGCTAACACTAATGAACACAATTGCGAATTGGGTGATATGTTGGAA
TCAGCTGCAATGATTTTGGTGCAGTCCTACAAAGCGTTGGGGAGGACATCAGAAATACTG
AAACAGCTGAAAGTGCTATTTGGTTCAGTCACTGCTATTCCTGCCCAAGTTTTCCTTACT
GGGGTGTGTCTCCAGATACCAGATGGCCCTTCTGCTGAAGTTAAAGAAATTCTAGAGGAG
TTCCTTATGAAGTGGAGATATGTTGATGGAAAGTATTATACTATTGCAAACATGGAAGCT
GATGTATCTTACATGGAAGAATTTAGCAATCAGATTTCCCTTCGAGTGGATAAGTACCTG
GAAATTATTGAGCTCTATGTGATTACCTTTTTGGGGAGGATTCTAGGAAATTTTGATCTT
GCTATCTCTTGGGTTGAGAAATCCCCTCTATCTGACGAGAAGAGGCAGGATCTTTTGAGG
CAGTTGCACTCCATGAATACTTTAAAGCTTGGCAGCTCTTCGCAGTCCTCGGCATTACCT
CTCCAAATAGATGAATGTACAACTGATTCCACTTCCCTGATTGAAGAAAAATCATGCAAT
GGAACAGCAAATATTTTGGAACACAGAGACCAGTCTAAGGGAGAGAACACCACGAAACAA
TCAATTTTGGAGTTTTCTAGACGGAGAACTCCATTTTGGTGGTTTCGTACAATCACTTTG
AAGTTTGGAAGCAGTTGCTTGGTTTTATCAAATGGAAGCATCTTTCTTGGTTTTTTGGTG
TCACTTGTTTACTATATTGTGCGGAGAAAACAAGCCTCTCTATGGAGGTAA