Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016521
CDS Infomation

pacid=37455321 polypeptide=PGSC0003DMP400011453 locus=PGSC0003DMG400006453 ID=PGSC0003DMT400016521.v4.03 annot-version=v4.03
Sequence

ATGGACCAAGTTCAGCCAATGTACCGGCCACCGCCGCCGGAGACACCCAAAGAACCAATG
GAATTTCTATCTCGTTCATGGAGTCTCTCTGCTTTTGAAGTCTCTAAAGCTTTAGCTCCT
CCTCAAGTTTTACCTAAATCACTATTTAGTGGTACCCCTTCTTATATTGGGAGTGGTAGT
GGTACTATACCGGAAGATATTGCCGCCGAGTTAGATGAATCCGCCATTGTTTCCGGCAAC
CCTTTTTCATTTGCTTCTTCTGAAACTTCTCAGCTTATTATGGAACGCATTATGTCTGTT
TCTCAGGATGTTTCACCACGCACATCTGGACGGCTCTCTCACAGTAGTGGACCTTTAAAT
GGTGGCTCTCTTACAGACAGTCCCCCTGTTTCTCCTTCTGAAATGGACGATTCTAAGTAC
TGTCGTGTAAACAACGTGCCGGTTAATAACCAGTATAGGAGTAGTGCTACTGCTACTAGC
TCGGCTGTTACTGGTGGCGGTGGTGGTGGTGGAGGAGGGAAGACGGTGGGTAGGTGGTTG
AAGGATAGGAGGGAGAAGAAGAAAGAGGAGATGAGGGCACATAATGCACAACTTCATGCT
GCTGTGTCGGTTGCAGGAGTTGCTGCTGCTGTTGCTGCTATAGCTGCAGCTACTGCAGCT
TCATCTGGTAGTGGAAAGGATGAGCAGATGGCGAAAACTGATATGGCTGTGGCCTCTGCT
GCTACCTTGGTGGCAGCTCAGTGTGTTGAAGCTGCCGAGGCTATGGGAGCTGAGCGCGAA
CATCTTGCATCGGTTGTTAGTTCTGCTGTGAACGTTCGATCAGCAGGGGATATCATGACA
TTAACTGCAGCTGCGGCTACTGCTCTACGTGGTGCGGCTACATTAAAGGCTAGAACATTG
AAGGAAGTATGGAACATAGCAGCAGTAATTCCTGTTGATAAAGGGATGGGTAGTGGCAAT
GGTGGTGGTAGCAATGGTAGTTCAAGTGGCGAGTTAATCCCCGAAGAGAATTTTCTTGGA
ATTTGCAGCAGGGAATTACTCGCACGGGGTGGTGAGCTCCTCAAACGTACACGCAAAGGT
GACCTGCATTGGAAGATAGTATCTGTATATATAAACAGGACAGGACAGGTGATGCTAAAA
ATGAAGAGTAGGCATGTTGCTGGGACCATAACAAAAAAGAAAAAGAATTTGGTGCTGGAA
GTCATGAAAGATATTCCGGCTTGGCCAGGGCGCCACTTGCTTCCGGGTAGTGACAACTTC
AAATACTTCGCGTTGAAGACTGTTCTACGAGGGGTCGTTGAGTTCGAATGTAGAGATCAG
AGAGAGTATGATCTATGGACTCAAGGTGTTTCAAGGTTGCTAAGTATTGCTGCAGAAAAA
AATAGTAGACAAAAATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400011453
PEP Infomation

pacid=37455321 transcript=PGSC0003DMT400016521 locus=PGSC0003DMG400006453 ID=PGSC0003DMT400016521.v4.03 annot-version=v4.03
Sequence

MDQVQPMYRPPPPETPKEPMEFLSRSWSLSAFEVSKALAPPQVLPKSLFSGTPSYIGSGS
GTIPEDIAAELDESAIVSGNPFSFASSETSQLIMERIMSVSQDVSPRTSGRLSHSSGPLN
GGSLTDSPPVSPSEMDDSKYCRVNNVPVNNQYRSSATATSSAVTGGGGGGGGGKTVGRWL
KDRREKKKEEMRAHNAQLHAAVSVAGVAAAVAAIAAATAASSGSGKDEQMAKTDMAVASA
ATLVAAQCVEAAEAMGAEREHLASVVSSAVNVRSAGDIMTLTAAAATALRGAATLKARTL
KEVWNIAAVIPVDKGMGSGNGGGSNGSSSGELIPEENFLGICSRELLARGGELLKRTRKG
DLHWKIVSVYINRTGQVMLKMKSRHVAGTITKKKKNLVLEVMKDIPAWPGRHLLPGSDNF
KYFALKTVLRGVVEFECRDQREYDLWTQGVSRLLSIAAEKNSRQKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400016521
Transcript Infomation

pacid=37455321 locus=PGSC0003DMG400006453 ID=PGSC0003DMT400016521.v4.03 annot-version=v4.03
Sequence

ATGGACCAAGTTCAGCCAATGTACCGGCCACCGCCGCCGGAGACACCCAAAGAACCAATG
GAATTTCTATCTCGTTCATGGAGTCTCTCTGCTTTTGAAGTCTCTAAAGCTTTAGCTCCT
CCTCAAGTTTTACCTAAATCACTATTTAGTGGTACCCCTTCTTATATTGGGAGTGGTAGT
GGTACTATACCGGAAGATATTGCCGCCGAGTTAGATGAATCCGCCATTGTTTCCGGCAAC
CCTTTTTCATTTGCTTCTTCTGAAACTTCTCAGCTTATTATGGAACGCATTATGTCTGTT
TCTCAGGATGTTTCACCACGCACATCTGGACGGCTCTCTCACAGTAGTGGACCTTTAAAT
GGTGGCTCTCTTACAGACAGTCCCCCTGTTTCTCCTTCTGAAATGGACGATTCTAAGTAC
TGTCGTGTAAACAACGTGCCGGTTAATAACCAGTATAGGAGTAGTGCTACTGCTACTAGC
TCGGCTGTTACTGGTGGCGGTGGTGGTGGTGGAGGAGGGAAGACGGTGGGTAGGTGGTTG
AAGGATAGGAGGGAGAAGAAGAAAGAGGAGATGAGGGCACATAATGCACAACTTCATGCT
GCTGTGTCGGTTGCAGGAGTTGCTGCTGCTGTTGCTGCTATAGCTGCAGCTACTGCAGCT
TCATCTGGTAGTGGAAAGGATGAGCAGATGGCGAAAACTGATATGGCTGTGGCCTCTGCT
GCTACCTTGGTGGCAGCTCAGTGTGTTGAAGCTGCCGAGGCTATGGGAGCTGAGCGCGAA
CATCTTGCATCGGTTGTTAGTTCTGCTGTGAACGTTCGATCAGCAGGGGATATCATGACA
TTAACTGCAGCTGCGGCTACTGCTCTACGTGGTGCGGCTACATTAAAGGCTAGAACATTG
AAGGAAGTATGGAACATAGCAGCAGTAATTCCTGTTGATAAAGGGATGGGTAGTGGCAAT
GGTGGTGGTAGCAATGGTAGTTCAAGTGGCGAGTTAATCCCCGAAGAGAATTTTCTTGGA
ATTTGCAGCAGGGAATTACTCGCACGGGGTGGTGAGCTCCTCAAACGTACACGCAAAGGT
GACCTGCATTGGAAGATAGTATCTGTATATATAAACAGGACAGGACAGGTGATGCTAAAA
ATGAAGAGTAGGCATGTTGCTGGGACCATAACAAAAAAGAAAAAGAATTTGGTGCTGGAA
GTCATGAAAGATATTCCGGCTTGGCCAGGGCGCCACTTGCTTCCGGGTAGTGACAACTTC
AAATACTTCGCGTTGAAGACTGTTCTACGAGGGGTCGTTGAGTTCGAATGTAGAGATCAG
AGAGAGTATGATCTATGGACTCAAGGTGTTTCAAGGTTGCTAAGTATTGCTGCAGAAAAA
AATAGTAGACAAAAATTTTGA