Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016484
CDS Infomation

pacid=37456931 polypeptide=PGSC0003DMP400011423 locus=PGSC0003DMG404006439 ID=PGSC0003DMT400016484.v4.03 annot-version=v4.03
Sequence

ATGGAGCACAACACACAAATCCAAATTCCAAGAGTCAAATTGGGTACCCAGGGTCTTGAG
GTCTCGAAACTCGGGTTTGGTTGTGTAGGACTTTCTGGCTATTTTAATGCTCCTCTGTCA
CATGAAGCTGGGTGTGCAGTCTTAAAGGAAGCATTCAGCAAAGGCATCACTTTCTTTGAC
ACAGCAAACGTATACGGGCATGAGGGTTACAATGAGATAATGGTGGGAAAGGTATTGAAG
CAGCTCCCTCGTGAGCAAGTCCAACTGGCAACCAAATTTGGGTGTATATTTCCCGAGGAC
TTCAGTGACTTCCAGTGTCAAGTCAAATGCACTCCACAATATGTGCGGCAATGCTGTGAA
GAAAGTCTCAAGCGGCTTGACGTGGACTACATTGATTTATATTATCAGCACCGGACAGAC
ACATCTGTGCCTATAGAGGAAACTATGGGGGAACTCAAGAAGCTAGTGGAGGAGGGAAAG
ATAAGGTACATTGGCTTGTCTGAAGCCAGTGTTGACACAATTAAGAGGGCGCATGCTGTT
CATCCCATCACTTGTGTGCAAATGGAGTATTCTCTTTGGACTCGTGAGATAGAAGAGGAT
GTAATTCCGCTTTGTAGAGAATTGGGCATCGGGATTGTTGCGTACAGCCCTCTTGGCCAG
GGGTTCTTTGGTGGTAAGGCAATCACAGAAAGTTTGCCTGCGGAAAGTCTGGTGGGTTCT
CATCCAAGATTTTCCGGAGAGAACTTGGAGAAGAACAAAGCTCTTTACACAAGATTTGCA
AACTTAGCAGCAAAGCATGGTTGTACACCTCCTCAACTAGCTTTAGCGTGGCTTATGCAT
CAGGGAGATGACATGATTCCGATACCTGGAACAACAAAGATTAAGAACCTAGATGCCAAT
ATTCAATCCCTAGCAGTGAAACTTACACCAGAAGATGTGAGGGAAATCGTGGATGCTATC
CCCATTAGTGAAGTCTGTGGAGATAGAGAGCATGAAACGATGTTTAAGTACGATTATCGG
GTAGCTAATACACCATTAAAGCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011423
PEP Infomation

pacid=37456931 transcript=PGSC0003DMT400016484 locus=PGSC0003DMG404006439 ID=PGSC0003DMT400016484.v4.03 annot-version=v4.03
Sequence

MEHNTQIQIPRVKLGTQGLEVSKLGFGCVGLSGYFNAPLSHEAGCAVLKEAFSKGITFFD
TANVYGHEGYNEIMVGKVLKQLPREQVQLATKFGCIFPEDFSDFQCQVKCTPQYVRQCCE
ESLKRLDVDYIDLYYQHRTDTSVPIEETMGELKKLVEEGKIRYIGLSEASVDTIKRAHAV
HPITCVQMEYSLWTREIEEDVIPLCRELGIGIVAYSPLGQGFFGGKAITESLPAESLVGS
HPRFSGENLEKNKALYTRFANLAAKHGCTPPQLALAWLMHQGDDMIPIPGTTKIKNLDAN
IQSLAVKLTPEDVREIVDAIPISEVCGDREHETMFKYDYRVANTPLKQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400016484
Transcript Infomation

pacid=37456931 locus=PGSC0003DMG404006439 ID=PGSC0003DMT400016484.v4.03 annot-version=v4.03
Sequence

ATGGAGCACAACACACAAATCCAAATTCCAAGAGTCAAATTGGGTACCCAGGGTCTTGAG
GTCTCGAAACTCGGGTTTGGTTGTGTAGGACTTTCTGGCTATTTTAATGCTCCTCTGTCA
CATGAAGCTGGGTGTGCAGTCTTAAAGGAAGCATTCAGCAAAGGCATCACTTTCTTTGAC
ACAGCAAACGTATACGGGCATGAGGGTTACAATGAGATAATGGTGGGAAAGGTATTGAAG
CAGCTCCCTCGTGAGCAAGTCCAACTGGCAACCAAATTTGGGTGTATATTTCCCGAGGAC
TTCAGTGACTTCCAGTGTCAAGTCAAATGCACTCCACAATATGTGCGGCAATGCTGTGAA
GAAAGTCTCAAGCGGCTTGACGTGGACTACATTGATTTATATTATCAGCACCGGACAGAC
ACATCTGTGCCTATAGAGGAAACTATGGGGGAACTCAAGAAGCTAGTGGAGGAGGGAAAG
ATAAGGTACATTGGCTTGTCTGAAGCCAGTGTTGACACAATTAAGAGGGCGCATGCTGTT
CATCCCATCACTTGTGTGCAAATGGAGTATTCTCTTTGGACTCGTGAGATAGAAGAGGAT
GTAATTCCGCTTTGTAGAGAATTGGGCATCGGGATTGTTGCGTACAGCCCTCTTGGCCAG
GGGTTCTTTGGTGGTAAGGCAATCACAGAAAGTTTGCCTGCGGAAAGTCTGGTGGGTTCT
CATCCAAGATTTTCCGGAGAGAACTTGGAGAAGAACAAAGCTCTTTACACAAGATTTGCA
AACTTAGCAGCAAAGCATGGTTGTACACCTCCTCAACTAGCTTTAGCGTGGCTTATGCAT
CAGGGAGATGACATGATTCCGATACCTGGAACAACAAAGATTAAGAACCTAGATGCCAAT
ATTCAATCCCTAGCAGTGAAACTTACACCAGAAGATGTGAGGGAAATCGTGGATGCTATC
CCCATTAGTGAAGTCTGTGGAGATAGAGAGCATGAAACGATGTTTAAGTACGATTATCGG
GTAGCTAATACACCATTAAAGCAGTAA