Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016463
CDS Infomation

pacid=37434580 polypeptide=PGSC0003DMP400011408 locus=PGSC0003DMG400006432 ID=PGSC0003DMT400016463.v4.03 annot-version=v4.03
Sequence

ATGCTGCAGCTGAATCTCTCGAAGAGATCCAGCAACAGTAACGAACATCATCATGATTCT
TCTAAGAAATCCAAACTAACCTTTGAGCTCAAACACGCTTTCCACACCGTCAAATCTCAA
ATCCCTTTAACTCACTGTGTATGGCTTCTTATTACCATATTCCTCCAGATCTTAATCCTC
TTCTTCCTCATCCGCTCCTCTCCGCCTCATCCACCGCCGTCCAACTCCCAACAGCTGGTA
GCACTCAACCCGGACTGCCAATCCGGTTACGTCTACGTCTACGACCTACCTGCTACTTTC
AACACGGAGTTTATTGACAAATGTGAGGAACTAGACCCGTGGAAATCGCGCTGTAAAGCG
GTTTCCAACGGTGGGTTCGGGCCCAGTGCTACTGGGCTCGAACGCGTTGTACCGGAAGAT
ATCACTCCAGCTTGGTACTGGACTGACATGTATGCTGCTGAGGTTATTTATCATAACAGA
ATGTTGAGTCATAAGTGCAGGATTATGGATCCGGAAAAAGCAACGGGGTTTTATATTCCG
TTTTACGCCGGACTTGATATTGGGAAGTTTTTGTGGTTTAATTATACGGCGAAAGATCGA
GATCGGAAAAGTGAAATGGTTCTCGATTGGTTGAAAGAGCAGCCGACTTTTACTAGAGCT
AACGGAGTAGATCACTTCATTATGCTTGGCCGATTAACTTGGGATTTCCGACGATTAACT
GCTAACGATTCGGAATGGGGATCGAGTTTGCTTTACATGCCATTGATGAAGAATGTGTTC
CGTTTATCAGTAGAAAAGCATCAAAATGACGATTTAGAAGAAAGCGTACCTTATCCAACA
GCTTTTCACCCGAGATCTGAATCCGATATAGTCCAATGGCAGAATTACATCCGGAACTAC
GACCGTACAAAGCTCTTCTCCTTCGTCGGAGCTAAGCGTGAGAAAATCAAAAACGATTTC
CGAGGAGTACTAATGGATTACTGTAAATCCGAAGAAAACTGCCTCGCCGTCGACTGCGCC
ACCACCGTGTGTTCCGACGGAGCTCCGGCGATTATGGAAGCGTTTCTAGATTCCGATTTC
TGCTTACAGCCTCGAGGAGATGGGTTAACTAGACGGTCTACTTTTGACTGTATGTTAGCT
GGTTCAATCCCGGTTTATTTCTGGAGAGGAACATTTAAAGGTCAGTATGAATGGCATCTG
CCATGGATGGCGGAGAGTTATACAGTGTTCATCGATCATGATAATGTGAGAGATACAAAT
GGGAGTTTGATTCTGCAAGTTTTGCAAGGGATTCATAAAGATAAGGTGAAGGAAATGAGA
GAGACGTTGATTAATCTTCTTCCTAAATTTGTTTACGCAACGCCAGGTAAAGATTTAGGG
AGTGTTAAAGATGCATTTGATATCACCATTGATAGAGTATTGAAGAGATTGAAGTCTCGC
AGAGATCAGTATTTTGAATCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011408
PEP Infomation

pacid=37434580 transcript=PGSC0003DMT400016463 locus=PGSC0003DMG400006432 ID=PGSC0003DMT400016463.v4.03 annot-version=v4.03
Sequence

MLQLNLSKRSSNSNEHHHDSSKKSKLTFELKHAFHTVKSQIPLTHCVWLLITIFLQILIL
FFLIRSSPPHPPPSNSQQLVALNPDCQSGYVYVYDLPATFNTEFIDKCEELDPWKSRCKA
VSNGGFGPSATGLERVVPEDITPAWYWTDMYAAEVIYHNRMLSHKCRIMDPEKATGFYIP
FYAGLDIGKFLWFNYTAKDRDRKSEMVLDWLKEQPTFTRANGVDHFIMLGRLTWDFRRLT
ANDSEWGSSLLYMPLMKNVFRLSVEKHQNDDLEESVPYPTAFHPRSESDIVQWQNYIRNY
DRTKLFSFVGAKREKIKNDFRGVLMDYCKSEENCLAVDCATTVCSDGAPAIMEAFLDSDF
CLQPRGDGLTRRSTFDCMLAGSIPVYFWRGTFKGQYEWHLPWMAESYTVFIDHDNVRDTN
GSLILQVLQGIHKDKVKEMRETLINLLPKFVYATPGKDLGSVKDAFDITIDRVLKRLKSR
RDQYFES*

Transcript Sequence

Transcript ID

PGSC0003DMT400016463
Transcript Infomation

pacid=37434580 locus=PGSC0003DMG400006432 ID=PGSC0003DMT400016463.v4.03 annot-version=v4.03
Sequence

ATGCTGCAGCTGAATCTCTCGAAGAGATCCAGCAACAGTAACGAACATCATCATGATTCT
TCTAAGAAATCCAAACTAACCTTTGAGCTCAAACACGCTTTCCACACCGTCAAATCTCAA
ATCCCTTTAACTCACTGTGTATGGCTTCTTATTACCATATTCCTCCAGATCTTAATCCTC
TTCTTCCTCATCCGCTCCTCTCCGCCTCATCCACCGCCGTCCAACTCCCAACAGCTGGTA
GCACTCAACCCGGACTGCCAATCCGGTTACGTCTACGTCTACGACCTACCTGCTACTTTC
AACACGGAGTTTATTGACAAATGTGAGGAACTAGACCCGTGGAAATCGCGCTGTAAAGCG
GTTTCCAACGGTGGGTTCGGGCCCAGTGCTACTGGGCTCGAACGCGTTGTACCGGAAGAT
ATCACTCCAGCTTGGTACTGGACTGACATGTATGCTGCTGAGGTTATTTATCATAACAGA
ATGTTGAGTCATAAGTGCAGGATTATGGATCCGGAAAAAGCAACGGGGTTTTATATTCCG
TTTTACGCCGGACTTGATATTGGGAAGTTTTTGTGGTTTAATTATACGGCGAAAGATCGA
GATCGGAAAAGTGAAATGGTTCTCGATTGGTTGAAAGAGCAGCCGACTTTTACTAGAGCT
AACGGAGTAGATCACTTCATTATGCTTGGCCGATTAACTTGGGATTTCCGACGATTAACT
GCTAACGATTCGGAATGGGGATCGAGTTTGCTTTACATGCCATTGATGAAGAATGTGTTC
CGTTTATCAGTAGAAAAGCATCAAAATGACGATTTAGAAGAAAGCGTACCTTATCCAACA
GCTTTTCACCCGAGATCTGAATCCGATATAGTCCAATGGCAGAATTACATCCGGAACTAC
GACCGTACAAAGCTCTTCTCCTTCGTCGGAGCTAAGCGTGAGAAAATCAAAAACGATTTC
CGAGGAGTACTAATGGATTACTGTAAATCCGAAGAAAACTGCCTCGCCGTCGACTGCGCC
ACCACCGTGTGTTCCGACGGAGCTCCGGCGATTATGGAAGCGTTTCTAGATTCCGATTTC
TGCTTACAGCCTCGAGGAGATGGGTTAACTAGACGGTCTACTTTTGACTGTATGTTAGCT
GGTTCAATCCCGGTTTATTTCTGGAGAGGAACATTTAAAGGTCAGTATGAATGGCATCTG
CCATGGATGGCGGAGAGTTATACAGTGTTCATCGATCATGATAATGTGAGAGATACAAAT
GGGAGTTTGATTCTGCAAGTTTTGCAAGGGATTCATAAAGATAAGGTGAAGGAAATGAGA
GAGACGTTGATTAATCTTCTTCCTAAATTTGTTTACGCAACGCCAGGTAAAGATTTAGGG
AGTGTTAAAGATGCATTTGATATCACCATTGATAGAGTATTGAAGAGATTGAAGTCTCGC
AGAGATCAGTATTTTGAATCGTAA