Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016452
CDS Infomation

pacid=37433574 polypeptide=PGSC0003DMP400011402 locus=PGSC0003DMG400006428 ID=PGSC0003DMT400016452.v4.03 annot-version=v4.03
Sequence

ATGTCTGACCTGGATGACATTTTCTTAGATGCAGACGATTTCAAGTCATGTTTACCCTTA
AAGAAAGTCCCATACGGCGACGTTTTCGAAGCTTCAAGGGCCGGAGATGTCGACCGTCTC
AAATACCTTTTGGAGTCTGGTGTTAACGTAAATGCGAGGGACCAATGGGATTCAGTTGCC
CTTTATTATGCTTGTCTTGCCGGTCATCTTGATGCTGCTCGAATGTTATTGGAGAGTGGT
GCTATATGTTCTGAGCATACTTTTGATGGTGACCGTTGCCATTATGCTGCGCTTAATCTT
AAGGTTAGAAAACTGTTGAAGGCCTTTGAAGCTCGGCCTCCTCCGCTTGGACCTTTGCAA
GGTGCTTTAAGAGATACTTTCTTGGCTTGTTGGGCTAATAAGAAATTTTTCGAACAATCT
GATGGTCAAGTGCCTATTTCGGGTAATTCAGAAAATGGAGGATCCTGCCCCAGTGACTTT
CCTCCGGATGTTGTATTCTACGTGCAAGGTCGGCCTATTGAAGCTCACAGAGTAATCTTG
ACTGCACGGTCGCCTTTCTTCGAACAGAAATTTCAGACTGAGTGGAAGGATAGAAAGGAA
GTACGATTCTCTAAGGAAAAGCTGTCTTATCATGCTCTTTATAGCCTCATCCACTTCTTT
TATTCCGACAGGCTTGATATAGCAGTAGATGACATGGAAGATCTTGTCAGAATTTGCAAA
GTTAGCAAATGCTTGTCACTACAAAAAGTCCTTGAGAAAGAGTTGATTCATCAAAAATAT
GCTGAGTACAAAGCACTAAGGGACGTAGATAACTCCCAAAAACGGTTCATCTTGCAGGGA
ATCTCTCTCCCAGAAGAAGACCGTCTTCCAAATGCTTTGCATAAAATTCTTCAAATTGCT
CTTGTGAATTCCAACAGCGAACAGAACTTGAATCATGATGTAGACGGTCTTATATGTCTT
GTCAGTTCAATGCAGATTAGTGAGTTTGAAGATGATCTTGCAGATGTTTGTGTTAGAGTT
GATAAGAAGATCTTTCGTTGCCATCAAGTGATCTTAGCATCAAGGTCTGAATATTTTAAA
GCGAGGTTGTCACGCATGAAGGATTTTCTGGAAGGGAGAGATTGTTTACCTGATAATGCA
CTTCCATGCATTGAGGAACATGATTTGACTGTTGGAGCTTTTAAGAAAATGATAGAGTAT
ATGTATACTGATGGGTTGAAGGACATTGACCCTGATCAAGCTGAAGAAATGTTTGATGCT
GCTTCAAGGTACCTGTTGTTTCCCCTTAAACGTGTCGTAGCAGATGCACTGCTGCCACAT
TTGGAAATGGTTTCTCCTGCTGAGTTGTGCCATTGGCTGGTATTGTCGGACATGTATGGT
GTTGTAAAGATTCGGGAGTATTGTCTAGACGCAATGGCATGTAACTTTGAGACATTTGCG
GATACCCAAGAGTTTAGGGCAATGCTTTTGACCCTACCACCACCATCTGGCGATTCTGCA
CTTCGTACAACTGCCCCAAGTGCTCCAGGAGCTGAGATGAGCAGCACAGCTGAAGGAAAC
GTTTTGGACGATCTGCGAGAGAAATGGCTCGAAGCTGAAGCTGCCGAACTCGATGAGAGA
GATGAGAGTGCATTACTTTTTGACAAGCGCCTTGAGATGCTCATGCAAATTGCAGAACAA
GAAAGAACTAATGGGCTTGAATGTAATGCAAGTAGTGAACAAGAACTTATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400011402
PEP Infomation

pacid=37433574 transcript=PGSC0003DMT400016452 locus=PGSC0003DMG400006428 ID=PGSC0003DMT400016452.v4.03 annot-version=v4.03
Sequence

MSDLDDIFLDADDFKSCLPLKKVPYGDVFEASRAGDVDRLKYLLESGVNVNARDQWDSVA
LYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQ
GALRDTFLACWANKKFFEQSDGQVPISGNSENGGSCPSDFPPDVVFYVQGRPIEAHRVIL
TARSPFFEQKFQTEWKDRKEVRFSKEKLSYHALYSLIHFFYSDRLDIAVDDMEDLVRICK
VSKCLSLQKVLEKELIHQKYAEYKALRDVDNSQKRFILQGISLPEEDRLPNALHKILQIA
LVNSNSEQNLNHDVDGLICLVSSMQISEFEDDLADVCVRVDKKIFRCHQVILASRSEYFK
ARLSRMKDFLEGRDCLPDNALPCIEEHDLTVGAFKKMIEYMYTDGLKDIDPDQAEEMFDA
ASRYLLFPLKRVVADALLPHLEMVSPAELCHWLVLSDMYGVVKIREYCLDAMACNFETFA
DTQEFRAMLLTLPPPSGDSALRTTAPSAPGAEMSSTAEGNVLDDLREKWLEAEAAELDER
DESALLFDKRLEMLMQIAEQERTNGLECNASSEQELI*

Transcript Sequence

Transcript ID

PGSC0003DMT400016452
Transcript Infomation

pacid=37433574 locus=PGSC0003DMG400006428 ID=PGSC0003DMT400016452.v4.03 annot-version=v4.03
Sequence

ATGTCTGACCTGGATGACATTTTCTTAGATGCAGACGATTTCAAGTCATGTTTACCCTTA
AAGAAAGTCCCATACGGCGACGTTTTCGAAGCTTCAAGGGCCGGAGATGTCGACCGTCTC
AAATACCTTTTGGAGTCTGGTGTTAACGTAAATGCGAGGGACCAATGGGATTCAGTTGCC
CTTTATTATGCTTGTCTTGCCGGTCATCTTGATGCTGCTCGAATGTTATTGGAGAGTGGT
GCTATATGTTCTGAGCATACTTTTGATGGTGACCGTTGCCATTATGCTGCGCTTAATCTT
AAGGTTAGAAAACTGTTGAAGGCCTTTGAAGCTCGGCCTCCTCCGCTTGGACCTTTGCAA
GGTGCTTTAAGAGATACTTTCTTGGCTTGTTGGGCTAATAAGAAATTTTTCGAACAATCT
GATGGTCAAGTGCCTATTTCGGGTAATTCAGAAAATGGAGGATCCTGCCCCAGTGACTTT
CCTCCGGATGTTGTATTCTACGTGCAAGGTCGGCCTATTGAAGCTCACAGAGTAATCTTG
ACTGCACGGTCGCCTTTCTTCGAACAGAAATTTCAGACTGAGTGGAAGGATAGAAAGGAA
GTACGATTCTCTAAGGAAAAGCTGTCTTATCATGCTCTTTATAGCCTCATCCACTTCTTT
TATTCCGACAGGCTTGATATAGCAGTAGATGACATGGAAGATCTTGTCAGAATTTGCAAA
GTTAGCAAATGCTTGTCACTACAAAAAGTCCTTGAGAAAGAGTTGATTCATCAAAAATAT
GCTGAGTACAAAGCACTAAGGGACGTAGATAACTCCCAAAAACGGTTCATCTTGCAGGGA
ATCTCTCTCCCAGAAGAAGACCGTCTTCCAAATGCTTTGCATAAAATTCTTCAAATTGCT
CTTGTGAATTCCAACAGCGAACAGAACTTGAATCATGATGTAGACGGTCTTATATGTCTT
GTCAGTTCAATGCAGATTAGTGAGTTTGAAGATGATCTTGCAGATGTTTGTGTTAGAGTT
GATAAGAAGATCTTTCGTTGCCATCAAGTGATCTTAGCATCAAGGTCTGAATATTTTAAA
GCGAGGTTGTCACGCATGAAGGATTTTCTGGAAGGGAGAGATTGTTTACCTGATAATGCA
CTTCCATGCATTGAGGAACATGATTTGACTGTTGGAGCTTTTAAGAAAATGATAGAGTAT
ATGTATACTGATGGGTTGAAGGACATTGACCCTGATCAAGCTGAAGAAATGTTTGATGCT
GCTTCAAGGTACCTGTTGTTTCCCCTTAAACGTGTCGTAGCAGATGCACTGCTGCCACAT
TTGGAAATGGTTTCTCCTGCTGAGTTGTGCCATTGGCTGGTATTGTCGGACATGTATGGT
GTTGTAAAGATTCGGGAGTATTGTCTAGACGCAATGGCATGTAACTTTGAGACATTTGCG
GATACCCAAGAGTTTAGGGCAATGCTTTTGACCCTACCACCACCATCTGGCGATTCTGCA
CTTCGTACAACTGCCCCAAGTGCTCCAGGAGCTGAGATGAGCAGCACAGCTGAAGGAAAC
GTTTTGGACGATCTGCGAGAGAAATGGCTCGAAGCTGAAGCTGCCGAACTCGATGAGAGA
GATGAGAGTGCATTACTTTTTGACAAGCGCCTTGAGATGCTCATGCAAATTGCAGAACAA
GAAAGAACTAATGGGCTTGAATGTAATGCAAGTAGTGAACAAGAACTTATATGA