Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016425
CDS Infomation

pacid=37471531 polypeptide=PGSC0003DMP400011381 locus=PGSC0003DMG400006417 ID=PGSC0003DMT400016425.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCGTTACCGTCGATTCTTCTTCCGCCACCGTCCCTGACGGCGCACTTCAAGCA
GAATCAATCCCAACCGTTGATCTCCGACTCCTTTCTCAATCTGAACTTTACTCTCTCTCC
CTCTGTTCCACCGCTGCTTTCAACCCTTGCCGGGACGACGATGTCATTATCCCTAAAATC
GACCGTTCGGTTTTCAATGAATCCGCTGGGTCCCGCAAACAAACCTATTCCCGTCTCCGT
CTTGCCCCCGCTGCTGCTGCCTCTGCTTCCTCCTCCGCCATCCGTAGCCGTACACCTCAC
CTCCGTAATTCTCCTCACCCTCTTCAGAATCCATCTCCAAACAATGGCCCAGCGAATTCG
GAGAGTTCCCAAATCGTTATCCTTCTTAAACAACTATTTGGTTCGGGTACTCAAAAGAAC
CCTACCGATTTGGTACCTATCCGGGTTGATTATTCCGATTCCTTATCTGTGCCCTCGCAT
GTGCCTGTTCCCGGGCTCGAATTGGCCAATGTGGGTTCAGTTGGGCAGAAAAGGAAACGA
GGTCGGCCTAGGAAGAATGAGAATGGTGTCCGGGTGGCTGAGGTTAAAGTGGATGAGGTA
GTGAAGGACATTGTAGTTTATCAAAATGTGGATGATAGCGATAAAGAGATCATGAATAAG
GATGGTATACCAGTGGATTTGGCAGTTCTAGGAGCATTGGTGGATCCGTTTGGCCTAGAA
CTGAGGCGGAGGACAGAGGGGTTGGGGAGTGCAGAGGAGTTGTTAGGGTTTCTGGGGAGA
TTGAATGGGCAATGGGGGAGTACGCGAAAGAAGAGGAGGATAGTGGATGCAGATGAGTTT
GGGAGTGTGCTGCCAAAAAGTTGGAAGCTTTTGCTTTCTATTAAGAGGAAAGAAGGCCGT
TCATGGTTGCATTGTCGACGCTACATAAGCCCTAATGGACGGCAATTTGGCACATGCAAG
GAAGTCTCTTCATATTTGCTATTTCTTCATGGTGAAAGGAAGGAAAATCTTCCAGCATAT
GCGAACGGCAGTGGAACTGTTGAGATCACCAATGCATGTGCTTTGACTTCAGATCTCAGA
ATTCAAGATGGTGGCAAAAAGGAAAGCTCTGTTTTTCATAACTCATCCCCTGCTGTTGGT
CATGGGGAGTTGCAAGTTCTAGTGAATTTTGGAGAACTATCGGAGGTCCAAGTAGGAGAT
CTCTTGCACTGTGACAAATGCAATGTGACGTTTAATAATAAGGATGATTTATTGCAGCAC
CAGTTATTTTCCCATCAGAGAAGGAGATCTAGAAATGGTGGTCAATCCATTACTGACGGG
GTAATAATTAGAGACGGAAAATTTGAATGTCAATTCTGCCACAAGACATTTGAAGAAAAG
CATCGATACAATGGTCATGTTGGGAACCATGTTAAGAAGCAGGTAAAGACTGTGGATGGA
TCGCTTCCAATCAAATTGGGAGGGGGTGTTGAACCTGTGGTGCCTAGCGGAGCCATGCTG
AGGGATCCCATTATGCAGGATTCAGTTGTTTTGCCGAGGAACTTGACAGAAAATGCTGGT
GTAATTACAGATGCCGGTGACAATCCTGCACCAACTAGTAAAATTCAGGAGGAGGATCAC
ATGGAGACTGACGATAAACTAGAAGCTGAAGGAACCAGTAATGGTTGTCATAACCAGGAA
GGGAGTTCTGTGAGCCGTTCCCCTATTTCATCGAATGAAAAAACATGTGTGGATATAAGC
AAAGTAATTGTCGGCTCCAACATAGAAGTACCTGAACAGGAAGGTTTACTTTGTTCAAAT
GACATTGTTGATTCGTGTGGTGTTAGTATGGAAGATGGCAATTTTTTCCCTACAGTGGAT
GAGAGCAAAGTAGATGGTAGGTCTGTAGATACTGAGTCAACAACTGTTTTATGCAGTAAT
GCCAGTCTGCCGGGTGGGAATAGTTTGATAAAAGCCAGACAAATTCCACATACTGAAGAT
CACTCAGGGAAGAACATTGATGATCTGAATGGTGTATCCTTTCTGGCAGAAACATCTAAA
GGAAACAGAGATTTAAAGAGCAGCACAGGTACCCCATCTTGTGACAAGGAAGGATCCACT
GTAGATTATGTCGGAGTTCTTTCTGGTTGCGTAGGTGAGCATAAACCTAGTAGCATGATG
TCTGATATGGAAAATAAGGAGTGTGGCAGTCTTGTTGATTCAAATGACAATAAGCTGATT
ATGAAAGAGGACAATCATGCATTTGTTCCACATCCAGATAAACATGTAAATACAGCTGAA
AGAGATGTGGTTGATGTTTCTGCTTGCATTCTAGAGGAGCTTGGACAGAAGAAAGGTGAT
GAGAGTAGTCTGCTTTCTCCGGCATGTGACAAGAACAGTGAGGTTGAATCTCTGATTTTT
AATGATTTGAAAACAAGTGCAGATGAGCCCAAGATTAGTGAGCTGCAGAGTGTTAGAAGT
AATATAGTGGGATTTACTTCTAGTGACAATCATGCTGTGAAAAAAGTTGCTGCCAGTGAC
ATAGAGAAGGAAAAAAGTCTTGCATTCTCCCCGCTTTTTCCTGCCATGAATGCAAGGGCA
TCATGTGCAGAAGATGACTATACCAAAGTTTACCAAAGCACACTGGAAGGTAATGATCTG
CAAAGGTCTGCAAGTGCATTGTTTTCTACAACCAACGTACCAGAAGCTTCTACCAAGGAA
TATACCATGCACAGGAGCTATAACAACTCTTTGAAAGAATCTAAATTTGATTGTCTAGAA
AACCCTAGACATCATGATCTAAATGTTGTTTTCGACAATTCTCATGTGGATCTAGGTGTA
AATTTGAACTGCACAACTTTCCAACTTGGCATGGAGGAAACATATGGTGTTCAGGATAAT
CTCCAGAAAAGATTGGAGACCGATAAACATGGAGAAGTAGGGATTGATTTAAGGGATTCA
TCTTTCAAGGAAAAAGCAGGGGATTTTGGAAGTAATTTCAACACCGTTTTTCATAGTCAG
TTGTGGAATGAACACAAATTAGATGAAGTTGATAACTCTGGAAAGAAGATCATTACTAGT
TTTGGTTGTGGAGATGCCAAACCTAATGAGGATGTCATGGCTGGAAGTATTTGGAGAGCG
GGTGTAGAAAATGTCATGCAAGGTGGCTCAGCAGACAATTCAACCTCAGTAGCGCAGTCA
TCTAATTGTTTCCAGACTTATGATGTTTTGTCAGATAAGGTTCCCAATCTTTTTGGAGAG
AATGAGAAGTATGATGGCAACACTGGCTTTGATGGGTTGAGCTCAGACAGAAGTGGACCA
GTGGAATATAGTTTCATGAGCACACAAAGTTCAAATTCCCTTCAAGAAGAGCCTCGAGTT
TTACCTTACGATGTGGATATAGAACAAGGATTTAATTCGTCATTTTGGCTCGGAAAAGAC
AATTTAATGCCAAATTTAGCTGGCAGTAATCAGGTGACTATGGTATGCGTTTGGTGCAGA
AATCTGTTTTATCAAGATTCTAACCAGTTAGAAGCTGGTTCAATTGGTGCAATGTGTCCA
ACCTGCAGTGGAAGTACTGCAGGGCAGTTTAGCTTTATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400011381
PEP Infomation

pacid=37471531 transcript=PGSC0003DMT400016425 locus=PGSC0003DMG400006417 ID=PGSC0003DMT400016425.v4.03 annot-version=v4.03
Sequence

MASVTVDSSSATVPDGALQAESIPTVDLRLLSQSELYSLSLCSTAAFNPCRDDDVIIPKI
DRSVFNESAGSRKQTYSRLRLAPAAAASASSSAIRSRTPHLRNSPHPLQNPSPNNGPANS
ESSQIVILLKQLFGSGTQKNPTDLVPIRVDYSDSLSVPSHVPVPGLELANVGSVGQKRKR
GRPRKNENGVRVAEVKVDEVVKDIVVYQNVDDSDKEIMNKDGIPVDLAVLGALVDPFGLE
LRRRTEGLGSAEELLGFLGRLNGQWGSTRKKRRIVDADEFGSVLPKSWKLLLSIKRKEGR
SWLHCRRYISPNGRQFGTCKEVSSYLLFLHGERKENLPAYANGSGTVEITNACALTSDLR
IQDGGKKESSVFHNSSPAVGHGELQVLVNFGELSEVQVGDLLHCDKCNVTFNNKDDLLQH
QLFSHQRRRSRNGGQSITDGVIIRDGKFECQFCHKTFEEKHRYNGHVGNHVKKQVKTVDG
SLPIKLGGGVEPVVPSGAMLRDPIMQDSVVLPRNLTENAGVITDAGDNPAPTSKIQEEDH
METDDKLEAEGTSNGCHNQEGSSVSRSPISSNEKTCVDISKVIVGSNIEVPEQEGLLCSN
DIVDSCGVSMEDGNFFPTVDESKVDGRSVDTESTTVLCSNASLPGGNSLIKARQIPHTED
HSGKNIDDLNGVSFLAETSKGNRDLKSSTGTPSCDKEGSTVDYVGVLSGCVGEHKPSSMM
SDMENKECGSLVDSNDNKLIMKEDNHAFVPHPDKHVNTAERDVVDVSACILEELGQKKGD
ESSLLSPACDKNSEVESLIFNDLKTSADEPKISELQSVRSNIVGFTSSDNHAVKKVAASD
IEKEKSLAFSPLFPAMNARASCAEDDYTKVYQSTLEGNDLQRSASALFSTTNVPEASTKE
YTMHRSYNNSLKESKFDCLENPRHHDLNVVFDNSHVDLGVNLNCTTFQLGMEETYGVQDN
LQKRLETDKHGEVGIDLRDSSFKEKAGDFGSNFNTVFHSQLWNEHKLDEVDNSGKKIITS
FGCGDAKPNEDVMAGSIWRAGVENVMQGGSADNSTSVAQSSNCFQTYDVLSDKVPNLFGE
NEKYDGNTGFDGLSSDRSGPVEYSFMSTQSSNSLQEEPRVLPYDVDIEQGFNSSFWLGKD
NLMPNLAGSNQVTMVCVWCRNLFYQDSNQLEAGSIGAMCPTCSGSTAGQFSFM*

Transcript Sequence

Transcript ID

PGSC0003DMT400016425
Transcript Infomation

pacid=37471531 locus=PGSC0003DMG400006417 ID=PGSC0003DMT400016425.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCGTTACCGTCGATTCTTCTTCCGCCACCGTCCCTGACGGCGCACTTCAAGCA
GAATCAATCCCAACCGTTGATCTCCGACTCCTTTCTCAATCTGAACTTTACTCTCTCTCC
CTCTGTTCCACCGCTGCTTTCAACCCTTGCCGGGACGACGATGTCATTATCCCTAAAATC
GACCGTTCGGTTTTCAATGAATCCGCTGGGTCCCGCAAACAAACCTATTCCCGTCTCCGT
CTTGCCCCCGCTGCTGCTGCCTCTGCTTCCTCCTCCGCCATCCGTAGCCGTACACCTCAC
CTCCGTAATTCTCCTCACCCTCTTCAGAATCCATCTCCAAACAATGGCCCAGCGAATTCG
GAGAGTTCCCAAATCGTTATCCTTCTTAAACAACTATTTGGTTCGGGTACTCAAAAGAAC
CCTACCGATTTGGTACCTATCCGGGTTGATTATTCCGATTCCTTATCTGTGCCCTCGCAT
GTGCCTGTTCCCGGGCTCGAATTGGCCAATGTGGGTTCAGTTGGGCAGAAAAGGAAACGA
GGTCGGCCTAGGAAGAATGAGAATGGTGTCCGGGTGGCTGAGGTTAAAGTGGATGAGGTA
GTGAAGGACATTGTAGTTTATCAAAATGTGGATGATAGCGATAAAGAGATCATGAATAAG
GATGGTATACCAGTGGATTTGGCAGTTCTAGGAGCATTGGTGGATCCGTTTGGCCTAGAA
CTGAGGCGGAGGACAGAGGGGTTGGGGAGTGCAGAGGAGTTGTTAGGGTTTCTGGGGAGA
TTGAATGGGCAATGGGGGAGTACGCGAAAGAAGAGGAGGATAGTGGATGCAGATGAGTTT
GGGAGTGTGCTGCCAAAAAGTTGGAAGCTTTTGCTTTCTATTAAGAGGAAAGAAGGCCGT
TCATGGTTGCATTGTCGACGCTACATAAGCCCTAATGGACGGCAATTTGGCACATGCAAG
GAAGTCTCTTCATATTTGCTATTTCTTCATGGTGAAAGGAAGGAAAATCTTCCAGCATAT
GCGAACGGCAGTGGAACTGTTGAGATCACCAATGCATGTGCTTTGACTTCAGATCTCAGA
ATTCAAGATGGTGGCAAAAAGGAAAGCTCTGTTTTTCATAACTCATCCCCTGCTGTTGGT
CATGGGGAGTTGCAAGTTCTAGTGAATTTTGGAGAACTATCGGAGGTCCAAGTAGGAGAT
CTCTTGCACTGTGACAAATGCAATGTGACGTTTAATAATAAGGATGATTTATTGCAGCAC
CAGTTATTTTCCCATCAGAGAAGGAGATCTAGAAATGGTGGTCAATCCATTACTGACGGG
GTAATAATTAGAGACGGAAAATTTGAATGTCAATTCTGCCACAAGACATTTGAAGAAAAG
CATCGATACAATGGTCATGTTGGGAACCATGTTAAGAAGCAGGTAAAGACTGTGGATGGA
TCGCTTCCAATCAAATTGGGAGGGGGTGTTGAACCTGTGGTGCCTAGCGGAGCCATGCTG
AGGGATCCCATTATGCAGGATTCAGTTGTTTTGCCGAGGAACTTGACAGAAAATGCTGGT
GTAATTACAGATGCCGGTGACAATCCTGCACCAACTAGTAAAATTCAGGAGGAGGATCAC
ATGGAGACTGACGATAAACTAGAAGCTGAAGGAACCAGTAATGGTTGTCATAACCAGGAA
GGGAGTTCTGTGAGCCGTTCCCCTATTTCATCGAATGAAAAAACATGTGTGGATATAAGC
AAAGTAATTGTCGGCTCCAACATAGAAGTACCTGAACAGGAAGGTTTACTTTGTTCAAAT
GACATTGTTGATTCGTGTGGTGTTAGTATGGAAGATGGCAATTTTTTCCCTACAGTGGAT
GAGAGCAAAGTAGATGGTAGGTCTGTAGATACTGAGTCAACAACTGTTTTATGCAGTAAT
GCCAGTCTGCCGGGTGGGAATAGTTTGATAAAAGCCAGACAAATTCCACATACTGAAGAT
CACTCAGGGAAGAACATTGATGATCTGAATGGTGTATCCTTTCTGGCAGAAACATCTAAA
GGAAACAGAGATTTAAAGAGCAGCACAGGTACCCCATCTTGTGACAAGGAAGGATCCACT
GTAGATTATGTCGGAGTTCTTTCTGGTTGCGTAGGTGAGCATAAACCTAGTAGCATGATG
TCTGATATGGAAAATAAGGAGTGTGGCAGTCTTGTTGATTCAAATGACAATAAGCTGATT
ATGAAAGAGGACAATCATGCATTTGTTCCACATCCAGATAAACATGTAAATACAGCTGAA
AGAGATGTGGTTGATGTTTCTGCTTGCATTCTAGAGGAGCTTGGACAGAAGAAAGGTGAT
GAGAGTAGTCTGCTTTCTCCGGCATGTGACAAGAACAGTGAGGTTGAATCTCTGATTTTT
AATGATTTGAAAACAAGTGCAGATGAGCCCAAGATTAGTGAGCTGCAGAGTGTTAGAAGT
AATATAGTGGGATTTACTTCTAGTGACAATCATGCTGTGAAAAAAGTTGCTGCCAGTGAC
ATAGAGAAGGAAAAAAGTCTTGCATTCTCCCCGCTTTTTCCTGCCATGAATGCAAGGGCA
TCATGTGCAGAAGATGACTATACCAAAGTTTACCAAAGCACACTGGAAGGTAATGATCTG
CAAAGGTCTGCAAGTGCATTGTTTTCTACAACCAACGTACCAGAAGCTTCTACCAAGGAA
TATACCATGCACAGGAGCTATAACAACTCTTTGAAAGAATCTAAATTTGATTGTCTAGAA
AACCCTAGACATCATGATCTAAATGTTGTTTTCGACAATTCTCATGTGGATCTAGGTGTA
AATTTGAACTGCACAACTTTCCAACTTGGCATGGAGGAAACATATGGTGTTCAGGATAAT
CTCCAGAAAAGATTGGAGACCGATAAACATGGAGAAGTAGGGATTGATTTAAGGGATTCA
TCTTTCAAGGAAAAAGCAGGGGATTTTGGAAGTAATTTCAACACCGTTTTTCATAGTCAG
TTGTGGAATGAACACAAATTAGATGAAGTTGATAACTCTGGAAAGAAGATCATTACTAGT
TTTGGTTGTGGAGATGCCAAACCTAATGAGGATGTCATGGCTGGAAGTATTTGGAGAGCG
GGTGTAGAAAATGTCATGCAAGGTGGCTCAGCAGACAATTCAACCTCAGTAGCGCAGTCA
TCTAATTGTTTCCAGACTTATGATGTTTTGTCAGATAAGGTTCCCAATCTTTTTGGAGAG
AATGAGAAGTATGATGGCAACACTGGCTTTGATGGGTTGAGCTCAGACAGAAGTGGACCA
GTGGAATATAGTTTCATGAGCACACAAAGTTCAAATTCCCTTCAAGAAGAGCCTCGAGTT
TTACCTTACGATGTGGATATAGAACAAGGATTTAATTCGTCATTTTGGCTCGGAAAAGAC
AATTTAATGCCAAATTTAGCTGGCAGTAATCAGGTGACTATGGTATGCGTTTGGTGCAGA
AATCTGTTTTATCAAGATTCTAACCAGTTAGAAGCTGGTTCAATTGGTGCAATGTGTCCA
ACCTGCAGTGGAAGTACTGCAGGGCAGTTTAGCTTTATGTAG