Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016389
CDS Infomation

pacid=37475851 polypeptide=PGSC0003DMP400011362 locus=PGSC0003DMG400006406 ID=PGSC0003DMT400016389.v4.03 annot-version=v4.03
Sequence

ATGCCGCCGTCCGGCGACGGAGCTGATGTCTCTGCCGGTGGCCCCTGTACGTGCTCTTCC
CTCGATGAGGAAAGCCTAATCCAGAACTGCCAGCATTGCCGGCGATCGACTCTCCCTTCC
TCTTCGTCATCTTGCTCTTTGCTTAGCCTCGAATCTTATCCGGTTCAGGATTACGACAAG
CTTTGGAGAATCTTTAGTGCTTCCGTTAAAGGATTCACTATTGGCGCTGGCCTAAAAGGT
GGCCTCGCTATCTTTGCTGTTCTCTCTCGGCTACGACGTAGAAAATCGATGTCCTCCGCG
AAGAAAGGGCAAATGGTCTCGAGCAGGGATGATGTAATTTTGGCACTAAAGGAAACTCTA
AGATATGGTCTGTTCCTTGGCACTTTCTCTGGTACATTTGTATCAGTTGATGAAATTGTA
TCCGCTTGGGGAGGTCATCGAAGGACAGCTAAGTGGAGAGCATTGCTAGCGGGTGCAATT
GCAGGGCCATCGTTGCTTCTTACTGGTAGCACACAGCACACGAGCTTGGCGGTTTACATT
CTTGTGCGTGCGGCTGTGTTGGCATCCCGTTGTGGAATAAAAAGTAAGCGGTTTGGGCGC
ATATGCAAGCCTTTAACTTGGGCTCACGGAGACATTTTCCTTATGTGTCTATCCTCTTCA
CAGATCCTGTCCGCTTATATATTGAAGCAAGATAGTCTGCATCCATCTTACAAATCCTTT
CTCAACAAACATGGTGGCAAAGCTTTGGTTATCCTGCAGGGTGTGAAAGATCTGGCATGT
GGGAACTCTGTAATGAATTTGGAAGCAATAGAGAATCATTACAAGTCCAATGGTATTGAC
ATTAAACTGGATCCGCAAATGAAAGTACCCTGCTCGGTATGTCATAGTTTCCTGTTCTTT
GGCAGTAAAAATAGTCCAAATATGAATGCTGCTTTCTATTTTAGTTGGGTGTGGTCCTCC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400011362
PEP Infomation

pacid=37475851 transcript=PGSC0003DMT400016389 locus=PGSC0003DMG400006406 ID=PGSC0003DMT400016389.v4.03 annot-version=v4.03
Sequence

MPPSGDGADVSAGGPCTCSSLDEESLIQNCQHCRRSTLPSSSSSCSLLSLESYPVQDYDK
LWRIFSASVKGFTIGAGLKGGLAIFAVLSRLRRRKSMSSAKKGQMVSSRDDVILALKETL
RYGLFLGTFSGTFVSVDEIVSAWGGHRRTAKWRALLAGAIAGPSLLLTGSTQHTSLAVYI
LVRAAVLASRCGIKSKRFGRICKPLTWAHGDIFLMCLSSSQILSAYILKQDSLHPSYKSF
LNKHGGKALVILQGVKDLACGNSVMNLEAIENHYKSNGIDIKLDPQMKVPCSVCHSFLFF
GSKNSPNMNAAFYFSWVWSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400016389
Transcript Infomation

pacid=37475851 locus=PGSC0003DMG400006406 ID=PGSC0003DMT400016389.v4.03 annot-version=v4.03
Sequence

ATGCCGCCGTCCGGCGACGGAGCTGATGTCTCTGCCGGTGGCCCCTGTACGTGCTCTTCC
CTCGATGAGGAAAGCCTAATCCAGAACTGCCAGCATTGCCGGCGATCGACTCTCCCTTCC
TCTTCGTCATCTTGCTCTTTGCTTAGCCTCGAATCTTATCCGGTTCAGGATTACGACAAG
CTTTGGAGAATCTTTAGTGCTTCCGTTAAAGGATTCACTATTGGCGCTGGCCTAAAAGGT
GGCCTCGCTATCTTTGCTGTTCTCTCTCGGCTACGACGTAGAAAATCGATGTCCTCCGCG
AAGAAAGGGCAAATGGTCTCGAGCAGGGATGATGTAATTTTGGCACTAAAGGAAACTCTA
AGATATGGTCTGTTCCTTGGCACTTTCTCTGGTACATTTGTATCAGTTGATGAAATTGTA
TCCGCTTGGGGAGGTCATCGAAGGACAGCTAAGTGGAGAGCATTGCTAGCGGGTGCAATT
GCAGGGCCATCGTTGCTTCTTACTGGTAGCACACAGCACACGAGCTTGGCGGTTTACATT
CTTGTGCGTGCGGCTGTGTTGGCATCCCGTTGTGGAATAAAAAGTAAGCGGTTTGGGCGC
ATATGCAAGCCTTTAACTTGGGCTCACGGAGACATTTTCCTTATGTGTCTATCCTCTTCA
CAGATCCTGTCCGCTTATATATTGAAGCAAGATAGTCTGCATCCATCTTACAAATCCTTT
CTCAACAAACATGGTGGCAAAGCTTTGGTTATCCTGCAGGGTGTGAAAGATCTGGCATGT
GGGAACTCTGTAATGAATTTGGAAGCAATAGAGAATCATTACAAGTCCAATGGTATTGAC
ATTAAACTGGATCCGCAAATGAAAGTACCCTGCTCGGTATGTCATAGTTTCCTGTTCTTT
GGCAGTAAAAATAGTCCAAATATGAATGCTGCTTTCTATTTTAGTTGGGTGTGGTCCTCC
TAA