Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016387
CDS Infomation

pacid=37471975 polypeptide=PGSC0003DMP400011360 locus=PGSC0003DMG400006405 ID=PGSC0003DMT400016387.v4.03 annot-version=v4.03
Sequence

ATGACTGGAGTTCATAATATTTGGTTTAAACACTTAGAAAGTCTCACTCTTGTAGAAAAT
CCAGATACAATTTTGTTTTCTGGTGGATTATTTATTGAACCATTGATTCCTTCTTCAATT
ACAAATAATTTTCTAAAAATATCATCAATTGATGATTCCAGTGAGTTACATTCTCCCTTT
TCTCGTCGTAGTGGACCAATTTTCCGGCGAGAAAAAAAAAGTGTTCATGCCGGTTTTGGG
GGTAATTTCTTGTGTTTGAGTTTGTCAGTTAAGAAGAATACTGAGGTTGTTGGGAATTCC
AGTGAATGTTTGTTGAGTAATGGAGACGAGAGTTCAAAGGTGGAAGAGTCTAGTGACGGC
AATGGGGATGTGAAGAAGCGAAATATTGGGTTACGGGGACGTGGTGCAATGAACACCAGC
AAACATTTGTGGGCTGGAGCAGTTGCTGCAATGGTGTCAAGAACTGTTGTTGCTCCACTT
GAAAGACTAAAGCTGGAATATATAGTTCGTGGTGAACAGAAGCACCTGTCGGAGCTCATC
AAAACAATTGCAGCTACTCAAGGCTTGAGAGGCTTTTGGAAAGGGAACTTGGTCAATATT
CTTCGTACTGCTCCTTTTAAGGCAGTTAATTTTTGTGCTTTTGACACATACAGAAAGCAA
CTCCTAAGATTATCAGGAAATGAAGAAACTACTAACATCGAGCGGTTTGTTGCTGGTGCT
GCAGCTGGAGTGACTGCTACTGTGATGTGCTTACCACTGGACACTATCCGGACCAAGTTA
GTGGCACGGGGTGGAGAAGCCTTGGGTGGTGTGGTTGGAGCTTTCCAACATGTGATCAGA
ACTGAAGGATTCTTCTCTCTTTATAAGGGACTAGTACCCTCCATTTTGAGTATGGCCCCA
GCAGCGGCTGTTTTCTATGGTGTATATGACATATTAAAATCAGCTTATTTGCGTTCACCT
GAAGGCAGAAAAAGAATAGAGTATATGAAGAATCAGGGAGCAGAGCTCAATGCTTTTGAC
CAGCTTGAGTTGGGACCTATGAGGACCTTACTTCATGGTGCTATTGCTGGTGCTTGTGCT
GAAGCTGCAACTTATCCATTTGAGGTCATTAGAAGACATCTTCAATTACAAGGCCGGGCA
TCTAAACTGAGTGCGTTGGCAACATGTGCGAAGATTGTTGAACAGGGAGGTGTTCCAGCT
CTATATGCAGGACTAATCCCTAGTTTACTACAGGTGTTACCTTCAGCCTCCATAAGCTAC
TTCGTCTACGAGTTCATGAAGATTGTTCTCAAAGCGGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400011360
PEP Infomation

pacid=37471975 transcript=PGSC0003DMT400016387 locus=PGSC0003DMG400006405 ID=PGSC0003DMT400016387.v4.03 annot-version=v4.03
Sequence

MTGVHNIWFKHLESLTLVENPDTILFSGGLFIEPLIPSSITNNFLKISSIDDSSELHSPF
SRRSGPIFRREKKSVHAGFGGNFLCLSLSVKKNTEVVGNSSECLLSNGDESSKVEESSDG
NGDVKKRNIGLRGRGAMNTSKHLWAGAVAAMVSRTVVAPLERLKLEYIVRGEQKHLSELI
KTIAATQGLRGFWKGNLVNILRTAPFKAVNFCAFDTYRKQLLRLSGNEETTNIERFVAGA
AAGVTATVMCLPLDTIRTKLVARGGEALGGVVGAFQHVIRTEGFFSLYKGLVPSILSMAP
AAAVFYGVYDILKSAYLRSPEGRKRIEYMKNQGAELNAFDQLELGPMRTLLHGAIAGACA
EAATYPFEVIRRHLQLQGRASKLSALATCAKIVEQGGVPALYAGLIPSLLQVLPSASISY
FVYEFMKIVLKAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400016387
Transcript Infomation

pacid=37471975 locus=PGSC0003DMG400006405 ID=PGSC0003DMT400016387.v4.03 annot-version=v4.03
Sequence

ATGACTGGAGTTCATAATATTTGGTTTAAACACTTAGAAAGTCTCACTCTTGTAGAAAAT
CCAGATACAATTTTGTTTTCTGGTGGATTATTTATTGAACCATTGATTCCTTCTTCAATT
ACAAATAATTTTCTAAAAATATCATCAATTGATGATTCCAGTGAGTTACATTCTCCCTTT
TCTCGTCGTAGTGGACCAATTTTCCGGCGAGAAAAAAAAAGTGTTCATGCCGGTTTTGGG
GGTAATTTCTTGTGTTTGAGTTTGTCAGTTAAGAAGAATACTGAGGTTGTTGGGAATTCC
AGTGAATGTTTGTTGAGTAATGGAGACGAGAGTTCAAAGGTGGAAGAGTCTAGTGACGGC
AATGGGGATGTGAAGAAGCGAAATATTGGGTTACGGGGACGTGGTGCAATGAACACCAGC
AAACATTTGTGGGCTGGAGCAGTTGCTGCAATGGTGTCAAGAACTGTTGTTGCTCCACTT
GAAAGACTAAAGCTGGAATATATAGTTCGTGGTGAACAGAAGCACCTGTCGGAGCTCATC
AAAACAATTGCAGCTACTCAAGGCTTGAGAGGCTTTTGGAAAGGGAACTTGGTCAATATT
CTTCGTACTGCTCCTTTTAAGGCAGTTAATTTTTGTGCTTTTGACACATACAGAAAGCAA
CTCCTAAGATTATCAGGAAATGAAGAAACTACTAACATCGAGCGGTTTGTTGCTGGTGCT
GCAGCTGGAGTGACTGCTACTGTGATGTGCTTACCACTGGACACTATCCGGACCAAGTTA
GTGGCACGGGGTGGAGAAGCCTTGGGTGGTGTGGTTGGAGCTTTCCAACATGTGATCAGA
ACTGAAGGATTCTTCTCTCTTTATAAGGGACTAGTACCCTCCATTTTGAGTATGGCCCCA
GCAGCGGCTGTTTTCTATGGTGTATATGACATATTAAAATCAGCTTATTTGCGTTCACCT
GAAGGCAGAAAAAGAATAGAGTATATGAAGAATCAGGGAGCAGAGCTCAATGCTTTTGAC
CAGCTTGAGTTGGGACCTATGAGGACCTTACTTCATGGTGCTATTGCTGGTGCTTGTGCT
GAAGCTGCAACTTATCCATTTGAGGTCATTAGAAGACATCTTCAATTACAAGGCCGGGCA
TCTAAACTGAGTGCGTTGGCAACATGTGCGAAGATTGTTGAACAGGGAGGTGTTCCAGCT
CTATATGCAGGACTAATCCCTAGTTTACTACAGGTGTTACCTTCAGCCTCCATAAGCTAC
TTCGTCTACGAGTTCATGAAGATTGTTCTCAAAGCGGAATGA