Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016363
CDS Infomation

pacid=37473003 polypeptide=PGSC0003DMP400011346 locus=PGSC0003DMG400006396 ID=PGSC0003DMT400016363.v4.03 annot-version=v4.03
Sequence

ATGGCAATGGCTATGGCTCTTCGTAAGATTTCTTACGGTTCCTCCATTAACCTTGTTCGT
CCTCTCTCCAATGGCTCTTCCGTGCATTACATGTCGTCTTTGCCTAATCAAGCAGTTCGA
AATAGGGAGGATCCGCGAGTTACGTGGATTAAGCAATTGAATGCGCCACTTGAAGAAATC
GATCCAGAGATTGCCGACATTATTGAGCTTGAGAAAGCTAGGCAATGGAAGGGTCTTGAG
CTTATCCCTTCAGAGAATTTTACATCACTGTCAGTGATGCAAGCAGTTGGATCAGTAATG
ACCAACAAATACAGTGAAGGGTATCCTGGTGCTAGATACTATGGAGGAAATGAGTATATT
GACATGGCAGAGAGATTGTGTCAAAAACGTGCACTGGAAGTTTTTAATTTGGATCCTGCC
AAATGGGGAGTCAATGTTCAGTCATTGTCTGGATCTCCTTCAAATTTTCAAGTGTACACT
GCTTTATTAAAGCCCCATGAGAGAATTATGGCGCTAGATCTTCCTCATGGTGGACATCTT
TCACATGGTTATCAGACTGACACAAAGAAGATTTCTGCTGTGTCTATCTTTTTCGAGACC
ATGCCTTACAGATTAGATGAGAGCACAGGTTATATTGACTATGAACAGCTGGAGAAAAGT
GCAACGCTCTTCCGACCGAAGTTGATTGTTGCTGGTGCAAGTGCTTATGCTCGCCTATAT
GATTATGCACGTATCCGTAAGGTATGTGACAAGCAAAAAGCTGTTCTCTTGGCAGACATG
GCACATATCAGTGGCTTGGTTGCTGCTGGAGTCATCCCTTCTCCTTTTGAGTATGCAGAT
GTTGTTACCACCACAACTCACAAGTCACTTCGTGGGCCACGTGGAGCGATGATCTTCTTC
AGAAAAGGAGTGAAGGAGATAAACAAAAAAGGAGAAGAAGTTATGTATGACTATGAAGAT
AAAATCAACCAAGCTGTTTTCCCTGGACTTCAAGGTGGCCCCCACAACCACACAATTTCT
GGCTTAGCTGTTGCACTGAAACAAGTCATGACACCAGAATACAAGGCATACCAAGAGCAA
GTTCTTAGCAACTGCTCTAAGTTTGCTGAGAGTTTGCTGGCAGCGGGATATGATCTTGTA
TCTGGTGGAACTGAGAATCATCTGGTGCTGGTAAACTTAAGAAATAAGGGTATTGATGGA
TCTAGAGTTGAGAAGGTTTTAGAGTCTGTGCATATTGCAGCCAATAAGAACACTGTGCCC
GGTGATGTATCTGCCATGGTACCTGGTGGCATTCGCATGGGAACCCCAGCTCTCACTTCT
AGGGGATTCATCGAGGAAGATTTTGTCAAAGTGGCTGAATTTTTTGATTCTGCTGTGAAG
TTGGCCCTTAAGGTCAAGGCAGAGGCCAAAGGAACGAAGCTGAAGGACTTTGTGGCAACT
TTGAGTTCAGACTCCAACATTCAATCTGAGGTTGCCAAGCTAAGGCAGGATGTTGAGGAC
TACGCCAAACAATTTCCTACTGTTGGTTTCGAGAAAGAAACAATGAAATACAAGAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400011346
PEP Infomation

pacid=37473003 transcript=PGSC0003DMT400016363 locus=PGSC0003DMG400006396 ID=PGSC0003DMT400016363.v4.03 annot-version=v4.03
Sequence

MAMAMALRKISYGSSINLVRPLSNGSSVHYMSSLPNQAVRNREDPRVTWIKQLNAPLEEI
DPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYI
DMAERLCQKRALEVFNLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHL
SHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSATLFRPKLIVAGASAYARLY
DYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF
RKGVKEINKKGEEVMYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQVMTPEYKAYQEQ
VLSNCSKFAESLLAAGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVP
GDVSAMVPGGIRMGTPALTSRGFIEEDFVKVAEFFDSAVKLALKVKAEAKGTKLKDFVAT
LSSDSNIQSEVAKLRQDVEDYAKQFPTVGFEKETMKYKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400016363
Transcript Infomation

pacid=37473003 locus=PGSC0003DMG400006396 ID=PGSC0003DMT400016363.v4.03 annot-version=v4.03
Sequence

ATGGCAATGGCTATGGCTCTTCGTAAGATTTCTTACGGTTCCTCCATTAACCTTGTTCGT
CCTCTCTCCAATGGCTCTTCCGTGCATTACATGTCGTCTTTGCCTAATCAAGCAGTTCGA
AATAGGGAGGATCCGCGAGTTACGTGGATTAAGCAATTGAATGCGCCACTTGAAGAAATC
GATCCAGAGATTGCCGACATTATTGAGCTTGAGAAAGCTAGGCAATGGAAGGGTCTTGAG
CTTATCCCTTCAGAGAATTTTACATCACTGTCAGTGATGCAAGCAGTTGGATCAGTAATG
ACCAACAAATACAGTGAAGGGTATCCTGGTGCTAGATACTATGGAGGAAATGAGTATATT
GACATGGCAGAGAGATTGTGTCAAAAACGTGCACTGGAAGTTTTTAATTTGGATCCTGCC
AAATGGGGAGTCAATGTTCAGTCATTGTCTGGATCTCCTTCAAATTTTCAAGTGTACACT
GCTTTATTAAAGCCCCATGAGAGAATTATGGCGCTAGATCTTCCTCATGGTGGACATCTT
TCACATGGTTATCAGACTGACACAAAGAAGATTTCTGCTGTGTCTATCTTTTTCGAGACC
ATGCCTTACAGATTAGATGAGAGCACAGGTTATATTGACTATGAACAGCTGGAGAAAAGT
GCAACGCTCTTCCGACCGAAGTTGATTGTTGCTGGTGCAAGTGCTTATGCTCGCCTATAT
GATTATGCACGTATCCGTAAGGTATGTGACAAGCAAAAAGCTGTTCTCTTGGCAGACATG
GCACATATCAGTGGCTTGGTTGCTGCTGGAGTCATCCCTTCTCCTTTTGAGTATGCAGAT
GTTGTTACCACCACAACTCACAAGTCACTTCGTGGGCCACGTGGAGCGATGATCTTCTTC
AGAAAAGGAGTGAAGGAGATAAACAAAAAAGGAGAAGAAGTTATGTATGACTATGAAGAT
AAAATCAACCAAGCTGTTTTCCCTGGACTTCAAGGTGGCCCCCACAACCACACAATTTCT
GGCTTAGCTGTTGCACTGAAACAAGTCATGACACCAGAATACAAGGCATACCAAGAGCAA
GTTCTTAGCAACTGCTCTAAGTTTGCTGAGAGTTTGCTGGCAGCGGGATATGATCTTGTA
TCTGGTGGAACTGAGAATCATCTGGTGCTGGTAAACTTAAGAAATAAGGGTATTGATGGA
TCTAGAGTTGAGAAGGTTTTAGAGTCTGTGCATATTGCAGCCAATAAGAACACTGTGCCC
GGTGATGTATCTGCCATGGTACCTGGTGGCATTCGCATGGGAACCCCAGCTCTCACTTCT
AGGGGATTCATCGAGGAAGATTTTGTCAAAGTGGCTGAATTTTTTGATTCTGCTGTGAAG
TTGGCCCTTAAGGTCAAGGCAGAGGCCAAAGGAACGAAGCTGAAGGACTTTGTGGCAACT
TTGAGTTCAGACTCCAACATTCAATCTGAGGTTGCCAAGCTAAGGCAGGATGTTGAGGAC
TACGCCAAACAATTTCCTACTGTTGGTTTCGAGAAAGAAACAATGAAATACAAGAATTGA