Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016354
CDS Infomation

pacid=37474873 polypeptide=PGSC0003DMP400011337 locus=PGSC0003DMG400006391 ID=PGSC0003DMT400016354.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGAACGGAGCCGGGAATGGAGAATTCAGTTTTGATAACAAGAGGAGGATTGGG
CTGCCGAAGATCCAGACTCAGAAGACAGAGGATGAAAACGTGGTTTGCCATGACGACAGT
GCTACGCCGGTGAAAGCTCAGACGCTGGACGAATTGCATTCTCTTCAGAAGAAGAAATCG
GCGCCGACTACTCCGATCAAGTCCCCTCATGTATTCGGCGTTGCCGTTTCTGAAGAGGAA
CGACAGAAACAGCAGCTACAATCCATTAGTGCATCATTGGCGTCATTGACACGAGAGACG
GGGCCAAAAGTGGTGAAAGGAGACCCAGCAAGGCAAGCGGAGACGCCAAAGGTGCAACAG
CCTGTGCATCACCACCCCACCCCTTCCCTTAACATTAGTGACAGTGGCCTCAAGTTCACC
CACATCCTTTATAATCTCTCTCCTGCTGAGTTGTATGAGCAAGCAATCAAGTATGAGAAG
GGATCATTCATCACGTCAAGTGGTGCTTTGGCCACACTTTCTGGAGCCAAAACTGGCCGT
TCCCCAAGAGACAAACGTGTTGTTAGAGACGAAACCACTGAGGACGACCTTTGGTGGGGA
AAAGGTTCACCCAATATCGAAATGGACGAACAGACTTTCTTAATCAACAGAGAAAGAGCT
GTTGATTACCTATGCTCTTTGGAGAAGGTGTTTGTGAATGATCAGTTCCTCAACTGGGAT
CCAAACAATCGTATCAAAGTTAGAATTGTATCTGCCAGAGCCTATCACTCCTTGTTCATG
CACAACATGTGTATCCGACCCACTCCAGAAGAGCTGGAGGATTTTGGTACTCCGGACTTC
ACAATTTACAATGCTGGTCAATTCCCATGTAACCGTTACACCCACTATATGACTTCCTCC
ACTAGCATAGACATCAATCTTGCTAGGAGGGAAATGGTCATCCTTGGCACACAGTATGCT
GGGGAAATGAAGAAAGGTCTTTTCGGGGTAATGCACTATCTAATGCCTAAGCGCCAAATT
CTCTCTCTACACTCTGGCTGCAATATGGGAAAAGAAGGAGATGTAGCCCTCTTCTTTGGA
TTATCAGGAACTGGGAAGACAACACTGTCTACTGATCACAACCGATACCTGATCGGAGAC
GATGAACACTGCTGGAGTGATCATGGTGTCTCAAACATTGAAGGAGGTTGCTATGCCAAA
TGCATAGACCTTGCAAGGGAGAAGGAGCCTGATATCTGGAATGCCATCAAGTTTGGCACT
GTGCTGGAAAACGTAGTTTTTGAAGAACATGCCCGAGAAGTGGATTATACAGACAAATCT
GTAACAGAGAACACCCGGGCAGCATACCCAATTGAATACATCCCAAATGCTAAAATACCA
TGTGTTGGTCCTCATCCAAAGAATGTCATTCTCCTTGCATGTGATGCATTCGGCGTGCTT
CCACCAGTCAGCAAATTGAACTTGGCACAGACAATGTACCACTTCATCAGTGGCTACACA
GCTTTGGTGGCAGGAACCGAAGATGGTATTAAGGAGCCTACAGCAACATTTTCAGCATGT
TTCGGTGCAGCATTTATCATGCTTCATCCAACCAAATATGCAGCCATGCTGGCTGAGAAG
ATGCAGAAACATGGAGCTACAGGATGGCTTGTGAACACTGGCTGGTCAGGTGGAAGTTAT
GGATCAGGCAGCCGAATTAAGTTAGCATACACAAGGAAGATCATCGATGCCATCCACTCT
GGTGCCCTTTTGAAAGCAGAATACAAGAAGACCGAGGTATTTGGGCTGGAGATTCCAACT
GCACTTGAGGGAGTACCTTCCGAGATTCTGGATCCGGTGAACACTTGGCCCAACAAGAAG
GCACACAAGGATACCCTGTTGAAGCTGGGAGGCCTGTTTAGGAAGAATTTTGAGGTGTTC
ACAAACTACAAGATTGGAAGTGATAGCAACCTGACTGAGGAGATCCTGGCCGCTGGTCCA
AACTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011337
PEP Infomation

pacid=37474873 transcript=PGSC0003DMT400016354 locus=PGSC0003DMG400006391 ID=PGSC0003DMT400016354.v4.03 annot-version=v4.03
Sequence

MASNGAGNGEFSFDNKRRIGLPKIQTQKTEDENVVCHDDSATPVKAQTLDELHSLQKKKS
APTTPIKSPHVFGVAVSEEERQKQQLQSISASLASLTRETGPKVVKGDPARQAETPKVQQ
PVHHHPTPSLNISDSGLKFTHILYNLSPAELYEQAIKYEKGSFITSSGALATLSGAKTGR
SPRDKRVVRDETTEDDLWWGKGSPNIEMDEQTFLINRERAVDYLCSLEKVFVNDQFLNWD
PNNRIKVRIVSARAYHSLFMHNMCIRPTPEELEDFGTPDFTIYNAGQFPCNRYTHYMTSS
TSIDINLARREMVILGTQYAGEMKKGLFGVMHYLMPKRQILSLHSGCNMGKEGDVALFFG
LSGTGKTTLSTDHNRYLIGDDEHCWSDHGVSNIEGGCYAKCIDLAREKEPDIWNAIKFGT
VLENVVFEEHAREVDYTDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVL
PPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEK
MQKHGATGWLVNTGWSGGSYGSGSRIKLAYTRKIIDAIHSGALLKAEYKKTEVFGLEIPT
ALEGVPSEILDPVNTWPNKKAHKDTLLKLGGLFRKNFEVFTNYKIGSDSNLTEEILAAGP
NF*

Transcript Sequence

Transcript ID

PGSC0003DMT400016354
Transcript Infomation

pacid=37474873 locus=PGSC0003DMG400006391 ID=PGSC0003DMT400016354.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGAACGGAGCCGGGAATGGAGAATTCAGTTTTGATAACAAGAGGAGGATTGGG
CTGCCGAAGATCCAGACTCAGAAGACAGAGGATGAAAACGTGGTTTGCCATGACGACAGT
GCTACGCCGGTGAAAGCTCAGACGCTGGACGAATTGCATTCTCTTCAGAAGAAGAAATCG
GCGCCGACTACTCCGATCAAGTCCCCTCATGTATTCGGCGTTGCCGTTTCTGAAGAGGAA
CGACAGAAACAGCAGCTACAATCCATTAGTGCATCATTGGCGTCATTGACACGAGAGACG
GGGCCAAAAGTGGTGAAAGGAGACCCAGCAAGGCAAGCGGAGACGCCAAAGGTGCAACAG
CCTGTGCATCACCACCCCACCCCTTCCCTTAACATTAGTGACAGTGGCCTCAAGTTCACC
CACATCCTTTATAATCTCTCTCCTGCTGAGTTGTATGAGCAAGCAATCAAGTATGAGAAG
GGATCATTCATCACGTCAAGTGGTGCTTTGGCCACACTTTCTGGAGCCAAAACTGGCCGT
TCCCCAAGAGACAAACGTGTTGTTAGAGACGAAACCACTGAGGACGACCTTTGGTGGGGA
AAAGGTTCACCCAATATCGAAATGGACGAACAGACTTTCTTAATCAACAGAGAAAGAGCT
GTTGATTACCTATGCTCTTTGGAGAAGGTGTTTGTGAATGATCAGTTCCTCAACTGGGAT
CCAAACAATCGTATCAAAGTTAGAATTGTATCTGCCAGAGCCTATCACTCCTTGTTCATG
CACAACATGTGTATCCGACCCACTCCAGAAGAGCTGGAGGATTTTGGTACTCCGGACTTC
ACAATTTACAATGCTGGTCAATTCCCATGTAACCGTTACACCCACTATATGACTTCCTCC
ACTAGCATAGACATCAATCTTGCTAGGAGGGAAATGGTCATCCTTGGCACACAGTATGCT
GGGGAAATGAAGAAAGGTCTTTTCGGGGTAATGCACTATCTAATGCCTAAGCGCCAAATT
CTCTCTCTACACTCTGGCTGCAATATGGGAAAAGAAGGAGATGTAGCCCTCTTCTTTGGA
TTATCAGGAACTGGGAAGACAACACTGTCTACTGATCACAACCGATACCTGATCGGAGAC
GATGAACACTGCTGGAGTGATCATGGTGTCTCAAACATTGAAGGAGGTTGCTATGCCAAA
TGCATAGACCTTGCAAGGGAGAAGGAGCCTGATATCTGGAATGCCATCAAGTTTGGCACT
GTGCTGGAAAACGTAGTTTTTGAAGAACATGCCCGAGAAGTGGATTATACAGACAAATCT
GTAACAGAGAACACCCGGGCAGCATACCCAATTGAATACATCCCAAATGCTAAAATACCA
TGTGTTGGTCCTCATCCAAAGAATGTCATTCTCCTTGCATGTGATGCATTCGGCGTGCTT
CCACCAGTCAGCAAATTGAACTTGGCACAGACAATGTACCACTTCATCAGTGGCTACACA
GCTTTGGTGGCAGGAACCGAAGATGGTATTAAGGAGCCTACAGCAACATTTTCAGCATGT
TTCGGTGCAGCATTTATCATGCTTCATCCAACCAAATATGCAGCCATGCTGGCTGAGAAG
ATGCAGAAACATGGAGCTACAGGATGGCTTGTGAACACTGGCTGGTCAGGTGGAAGTTAT
GGATCAGGCAGCCGAATTAAGTTAGCATACACAAGGAAGATCATCGATGCCATCCACTCT
GGTGCCCTTTTGAAAGCAGAATACAAGAAGACCGAGGTATTTGGGCTGGAGATTCCAACT
GCACTTGAGGGAGTACCTTCCGAGATTCTGGATCCGGTGAACACTTGGCCCAACAAGAAG
GCACACAAGGATACCCTGTTGAAGCTGGGAGGCCTGTTTAGGAAGAATTTTGAGGTGTTC
ACAAACTACAAGATTGGAAGTGATAGCAACCTGACTGAGGAGATCCTGGCCGCTGGTCCA
AACTTCTAA