Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016336
CDS Infomation

pacid=37472424 polypeptide=PGSC0003DMP400011324 locus=PGSC0003DMG400006384 ID=PGSC0003DMT400016336.v4.03 annot-version=v4.03
Sequence

ATGGTGGTAAGGAAAGTTGGGAAGTATGAAGTTGGAAGGACAATTGGAGAAGGAACGTTT
GCTAAGGTTAAATTTGCTCAGAATACTGAGACAGGTGAAAGTGTCGCCATGAAAGTCCTC
GATCGAAGCACTATCATCAAGCACAAGATGGTTGACCAGATAAAGCAGGAGATATCCATA
ATGAAGCTTGTTAGACATCCATATGTAGTTCGATTACATGAGGTTATAGCAACTCGCACG
AAGATCTATATTATCTTGGAATTTATCACAGGCGGAGAACTGTTTGATAAGATAGTCCAC
CATGGACGATTAAGTGAGGCCGAGTCTCGAAGATACTTTCAGCAATTGATTGATGGAGTT
GATTATTGTCACATCAAGGGAGTTTATCATAGAGACCTAAAGCCTGAAAATCTTCTGCTA
GATTCCCAAGGAAATCTGAAAATATCAGATTTTGGACTTAGCGCATCACCTGGTGAAGGA
GTCAACATCCTTAAGACGACATGTGGAACTCCCAACTATGTTGCACCAGAGGTTCTTAGT
CACAAAGGTTATGATGGTGCTGTGGCTGATATCTGGTCCTGTGGTGTCATCCTTTATGTT
CTGATGGCAGGTTATCTCCCTTTTGATGAGGTTGATCTCACTACACTGTACGCAAAGATT
GACAAAGCAGATTTTTCCTGCCCATCTTGGTTTCCTGTTGGAGCAAAATCTCTGATACAT
CGAATTTTAGACCCAAATCCTCAAACCCGTATTCGGATTGAAGAGATCCGTAATGATGAG
TGGTTTAAAAAAAATTATGATCCTGTCAAAGTCATGGAGTATGAAGATGTCAATTTAGAT
GATATTAATGCAGCTTTTGATGATACTGAGGAGGAAGCATCCAACGAGCAATGTGACAAT
GCGGATGCTGGGCCTCTGGCTCTAAATGCCTTTGACCTAATTATTCTCTCTCAAGGATTG
AACTTATCTATATTGTTTGACCGTGGGCAGGATTCAATGAAGCATCATCAAACACGCTTC
CTAACACAGAAACCAGCAAAAGTTGTGCTATCAAGTATGGAAGTTGTGGCCCAGTCCATG
GGTTTCAAGACCCATATCCGCAATTTTAAGATGAGGGTAGAAGGTCTTTCCGCAAACAAG
ACTTCACATTTCTCTGTAATTCTGGAGGTTTTCGAAGTTGCTCCTACATTTTTCATGGTA
GACGTTCAGAAAGCAGCCGGTGATGCTAGTGAATTCCTCAAGTTTTACAAGAACTTTTGT
GGCAATCTTGAGGACATTATCTGGAGGCCACCGGATGAATCATGCAAATCAAGAGTTACA
AAAGCAAGGAGTAGAAAGAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400011324
PEP Infomation

pacid=37472424 transcript=PGSC0003DMT400016336 locus=PGSC0003DMG400006384 ID=PGSC0003DMT400016336.v4.03 annot-version=v4.03
Sequence

MVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKQEISI
MKLVRHPYVVRLHEVIATRTKIYIILEFITGGELFDKIVHHGRLSEAESRRYFQQLIDGV
DYCHIKGVYHRDLKPENLLLDSQGNLKISDFGLSASPGEGVNILKTTCGTPNYVAPEVLS
HKGYDGAVADIWSCGVILYVLMAGYLPFDEVDLTTLYAKIDKADFSCPSWFPVGAKSLIH
RILDPNPQTRIRIEEIRNDEWFKKNYDPVKVMEYEDVNLDDINAAFDDTEEEASNEQCDN
ADAGPLALNAFDLIILSQGLNLSILFDRGQDSMKHHQTRFLTQKPAKVVLSSMEVVAQSM
GFKTHIRNFKMRVEGLSANKTSHFSVILEVFEVAPTFFMVDVQKAAGDASEFLKFYKNFC
GNLEDIIWRPPDESCKSRVTKARSRKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400016336
Transcript Infomation

pacid=37472424 locus=PGSC0003DMG400006384 ID=PGSC0003DMT400016336.v4.03 annot-version=v4.03
Sequence

ATGGTGGTAAGGAAAGTTGGGAAGTATGAAGTTGGAAGGACAATTGGAGAAGGAACGTTT
GCTAAGGTTAAATTTGCTCAGAATACTGAGACAGGTGAAAGTGTCGCCATGAAAGTCCTC
GATCGAAGCACTATCATCAAGCACAAGATGGTTGACCAGATAAAGCAGGAGATATCCATA
ATGAAGCTTGTTAGACATCCATATGTAGTTCGATTACATGAGGTTATAGCAACTCGCACG
AAGATCTATATTATCTTGGAATTTATCACAGGCGGAGAACTGTTTGATAAGATAGTCCAC
CATGGACGATTAAGTGAGGCCGAGTCTCGAAGATACTTTCAGCAATTGATTGATGGAGTT
GATTATTGTCACATCAAGGGAGTTTATCATAGAGACCTAAAGCCTGAAAATCTTCTGCTA
GATTCCCAAGGAAATCTGAAAATATCAGATTTTGGACTTAGCGCATCACCTGGTGAAGGA
GTCAACATCCTTAAGACGACATGTGGAACTCCCAACTATGTTGCACCAGAGGTTCTTAGT
CACAAAGGTTATGATGGTGCTGTGGCTGATATCTGGTCCTGTGGTGTCATCCTTTATGTT
CTGATGGCAGGTTATCTCCCTTTTGATGAGGTTGATCTCACTACACTGTACGCAAAGATT
GACAAAGCAGATTTTTCCTGCCCATCTTGGTTTCCTGTTGGAGCAAAATCTCTGATACAT
CGAATTTTAGACCCAAATCCTCAAACCCGTATTCGGATTGAAGAGATCCGTAATGATGAG
TGGTTTAAAAAAAATTATGATCCTGTCAAAGTCATGGAGTATGAAGATGTCAATTTAGAT
GATATTAATGCAGCTTTTGATGATACTGAGGAGGAAGCATCCAACGAGCAATGTGACAAT
GCGGATGCTGGGCCTCTGGCTCTAAATGCCTTTGACCTAATTATTCTCTCTCAAGGATTG
AACTTATCTATATTGTTTGACCGTGGGCAGGATTCAATGAAGCATCATCAAACACGCTTC
CTAACACAGAAACCAGCAAAAGTTGTGCTATCAAGTATGGAAGTTGTGGCCCAGTCCATG
GGTTTCAAGACCCATATCCGCAATTTTAAGATGAGGGTAGAAGGTCTTTCCGCAAACAAG
ACTTCACATTTCTCTGTAATTCTGGAGGTTTTCGAAGTTGCTCCTACATTTTTCATGGTA
GACGTTCAGAAAGCAGCCGGTGATGCTAGTGAATTCCTCAAGTTTTACAAGAACTTTTGT
GGCAATCTTGAGGACATTATCTGGAGGCCACCGGATGAATCATGCAAATCAAGAGTTACA
AAAGCAAGGAGTAGAAAGAGATGA