Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016310
CDS Infomation

pacid=37473060 polypeptide=PGSC0003DMP400011301 locus=PGSC0003DMG400006371 ID=PGSC0003DMT400016310.v4.03 annot-version=v4.03
Sequence

ATGTCATTCAAGAGCATTGTCCGAGAGCTGAAGGAAATGAAAAATGGGATAGGGAGTATA
TCAAGGAGAAGAGAAGTAGAAGGAAGGCATTGGCGAAACAGAACTCGGTCACATATAGCT
CCTGATGTGGTTCCTTTTGATCCCAATCAACAAGGGCAATGGGCAAATATACCACCAGAA
CTGCTTTTGGATATTGTCCACAGGGTTGAAGAGAGTGAGACATCATTTCCTGCTCGGACA
GCAGTAGTCTATTGTGCATCTGTTTGCAAGTCGTGGAGGGAAGTTACGAAAGAGATTGTC
AAGACTCCTGAAGAATGTGGTAGGCTTACATTCCCCATTTCACTAAAGCAGCCAGGTCCC
CGTGAATCCCCAATTCATTGCTTTATCAAACGGGACATAGCTAATTCAGTTTTTCGCCTC
TACTTTGGTTTGACTCCATCTGAGGATGTGAGTGATAAACTATTGCTGGCTGCCAAAAGG
ATCAGAAGGGCAACAAGCACAGACTTCGTAATTTCATTGGTTTCAGATGATTTTTCTCGA
GCTAGCAGTACATATGTCGGCAAACTGAGATCCAACTTTCTTGGAACCAAGTTCACCATA
TATGATAGCCAACCTCCAAGTGATGTAGCGATTCAACATCGTGGTAGACTTAGTCGACGA
TTCAGTGCTAAGCAAGTATCCCCAACAGTATCTGCATGCAACTACAGTATAGCCACCGTT
TCCTATGAACTCAATGTTCTCCGTACAAGGGGACCTAGGAGAATGCATTGTGCCATGCAT
TCCATCCCTTTCTCCTCTATCCAAGAGGGAGGCAGTGCTCCAACGCCTACATCATTCCCA
CAATCTTTTGATGAGAGGCCTTCAAAAGCAAAAGTGCCAGCTGTAAATATCAGCTCATCG
GTGTCAGTGCCTTCTCGAGAGCCACTTGTGCTTAAAAACAAGGCCCCTCGATGGCATGAA
CAATTGCAGTGCTGGTGCCTAAATTTCAAAGGCCGCGTTACAGTGGCATCCGTGAAAAAC
TTTCAGCTAGCGGCAGCAGTTGATCCATCTCACAATATACCCGCTGCAGTACAAGAAACA
ACAATTTTGCAATTTGGGAAAATTGGAAAAGATATCTTCACCATGGATTACTGCTACCCG
CTCTCTGCCTTTCAAGCTTTTGCAATATGCTTGAGCAGCTTTGACACAAAACCAGCGTGT
GAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400011301
PEP Infomation

pacid=37473060 transcript=PGSC0003DMT400016310 locus=PGSC0003DMG400006371 ID=PGSC0003DMT400016310.v4.03 annot-version=v4.03
Sequence

MSFKSIVRELKEMKNGIGSISRRREVEGRHWRNRTRSHIAPDVVPFDPNQQGQWANIPPE
LLLDIVHRVEESETSFPARTAVVYCASVCKSWREVTKEIVKTPEECGRLTFPISLKQPGP
RESPIHCFIKRDIANSVFRLYFGLTPSEDVSDKLLLAAKRIRRATSTDFVISLVSDDFSR
ASSTYVGKLRSNFLGTKFTIYDSQPPSDVAIQHRGRLSRRFSAKQVSPTVSACNYSIATV
SYELNVLRTRGPRRMHCAMHSIPFSSIQEGGSAPTPTSFPQSFDERPSKAKVPAVNISSS
VSVPSREPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLAAAVDPSHNIPAAVQET
TILQFGKIGKDIFTMDYCYPLSAFQAFAICLSSFDTKPACE*

Transcript Sequence

Transcript ID

PGSC0003DMT400016310
Transcript Infomation

pacid=37473060 locus=PGSC0003DMG400006371 ID=PGSC0003DMT400016310.v4.03 annot-version=v4.03
Sequence

ATGTCATTCAAGAGCATTGTCCGAGAGCTGAAGGAAATGAAAAATGGGATAGGGAGTATA
TCAAGGAGAAGAGAAGTAGAAGGAAGGCATTGGCGAAACAGAACTCGGTCACATATAGCT
CCTGATGTGGTTCCTTTTGATCCCAATCAACAAGGGCAATGGGCAAATATACCACCAGAA
CTGCTTTTGGATATTGTCCACAGGGTTGAAGAGAGTGAGACATCATTTCCTGCTCGGACA
GCAGTAGTCTATTGTGCATCTGTTTGCAAGTCGTGGAGGGAAGTTACGAAAGAGATTGTC
AAGACTCCTGAAGAATGTGGTAGGCTTACATTCCCCATTTCACTAAAGCAGCCAGGTCCC
CGTGAATCCCCAATTCATTGCTTTATCAAACGGGACATAGCTAATTCAGTTTTTCGCCTC
TACTTTGGTTTGACTCCATCTGAGGATGTGAGTGATAAACTATTGCTGGCTGCCAAAAGG
ATCAGAAGGGCAACAAGCACAGACTTCGTAATTTCATTGGTTTCAGATGATTTTTCTCGA
GCTAGCAGTACATATGTCGGCAAACTGAGATCCAACTTTCTTGGAACCAAGTTCACCATA
TATGATAGCCAACCTCCAAGTGATGTAGCGATTCAACATCGTGGTAGACTTAGTCGACGA
TTCAGTGCTAAGCAAGTATCCCCAACAGTATCTGCATGCAACTACAGTATAGCCACCGTT
TCCTATGAACTCAATGTTCTCCGTACAAGGGGACCTAGGAGAATGCATTGTGCCATGCAT
TCCATCCCTTTCTCCTCTATCCAAGAGGGAGGCAGTGCTCCAACGCCTACATCATTCCCA
CAATCTTTTGATGAGAGGCCTTCAAAAGCAAAAGTGCCAGCTGTAAATATCAGCTCATCG
GTGTCAGTGCCTTCTCGAGAGCCACTTGTGCTTAAAAACAAGGCCCCTCGATGGCATGAA
CAATTGCAGTGCTGGTGCCTAAATTTCAAAGGCCGCGTTACAGTGGCATCCGTGAAAAAC
TTTCAGCTAGCGGCAGCAGTTGATCCATCTCACAATATACCCGCTGCAGTACAAGAAACA
ACAATTTTGCAATTTGGGAAAATTGGAAAAGATATCTTCACCATGGATTACTGCTACCCG
CTCTCTGCCTTTCAAGCTTTTGCAATATGCTTGAGCAGCTTTGACACAAAACCAGCGTGT
GAATGA