Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016306
CDS Infomation

pacid=37471524 polypeptide=PGSC0003DMP400011298 locus=PGSC0003DMG400006369 ID=PGSC0003DMT400016306.v4.03 annot-version=v4.03
Sequence

ATGTGGTTATTAAAGGTGGCGAATCAAGGAGATTCCGGCGAGCATGACAGAAATCTGTCG
ACAGCAGGTGATTCAGAAACTACAACCAATGAAGGAATTCCTCAACCGTATGAACAATCG
CAATCTTTTGAAGAAATGTTACAGCAACAAATACAGCAAGAAACAGAGTATTTGATGTCG
GAATCGGCTAATCCGATGTATACAGGGTATAGTCAGTCGAGGGATATGTCGGAAATGGTG
ACGGCGTTGACGCATGTGGTTTCGGGTCGGAGAGAGGGAGAGTGGGGTTACAGGCCGGAT
ATTAGCGGTGTTACGACTTCGTTTGTTGGTGGTGGTGGTGGTTCGGGGAGTATTTATTCG
GCGAATTCACCGTCTTCTTCGAGTTCAGGATCATGGGCTGGACAGAAAAGAAGACGCGAT
CAAGAAGAAAGTGTTACTGGAGAAAGGGGTTATGGAGGTATTAGGGAATTTAAAAATGGA
GAACCATCTTCCTCTGTTAAGCCTGAAGAAGATACAAGCCTGGCAGCACCACAAACGAGC
AGCGTATCAACCACTGCAGCGCAGACACCACCGCAACCAGCGGAAGTAACAGGTGAAGAA
ACAGGGGAGAGGAAGAGGAGATACAGAGGAGTAAGACAGAGACCATGGGGGAAATGGGCA
GCAGAGATAAGAGATCCACATAAAGCAGCAAGAGTTTGGTTAGGCACATTTGATACAGCA
GAAGCAGCCGCTAAAGCTTATGATGACGCCGCTCTTAGATTCAGAGGAAACAGAGCTAAA
CTCAATTTCCCTGAAAACGTCCGATTATTACCACAACAACAGCCCACAACAAGATTAGCC
ATTTCAACCACAGCACCAGCACCAGCAGCTTCGCGGTTCCAACTAATGTCTGCAGCATCA
ATGCGATCACCATCACCATTTTTTCAATCACATAATCAACCTCCGCATCAACCTCAGCAG
CAACAGCTTTTTCAGAGCTCAGATATGGCTAGAGATTATTGGGAATACTCACAATTACTT
CAAAATCCAATAGATTTCCATGGAGGACAACAATCATCATCTTTGTTAGAACAAATGTTA
TTAGCTTCATCATTGGGAGTGTTGCATTCACATACATTTCCTTCTTCTTCATCTTCTTCG
TTAGCAACTTCTGCAGCTTCTTCCACTACTTCCCCTGCATATCCCCTGTTTTACTCTGCT
CAACAATCACGCTTCTTTCAGCCACAAACTCATCAAAATCAAAGCAATAGCAGTAGCAGC
AGCAGCTCCAATTTTCCTCCACCTTTTTGGACTAGCTCCGGCCACTACCCACCTTCTTCT
AGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011298
PEP Infomation

pacid=37471524 transcript=PGSC0003DMT400016306 locus=PGSC0003DMG400006369 ID=PGSC0003DMT400016306.v4.03 annot-version=v4.03
Sequence

MWLLKVANQGDSGEHDRNLSTAGDSETTTNEGIPQPYEQSQSFEEMLQQQIQQETEYLMS
ESANPMYTGYSQSRDMSEMVTALTHVVSGRREGEWGYRPDISGVTTSFVGGGGGSGSIYS
ANSPSSSSSGSWAGQKRRRDQEESVTGERGYGGIREFKNGEPSSSVKPEEDTSLAAPQTS
SVSTTAAQTPPQPAEVTGEETGERKRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTA
EAAAKAYDDAALRFRGNRAKLNFPENVRLLPQQQPTTRLAISTTAPAPAASRFQLMSAAS
MRSPSPFFQSHNQPPHQPQQQQLFQSSDMARDYWEYSQLLQNPIDFHGGQQSSSLLEQML
LASSLGVLHSHTFPSSSSSSLATSAASSTTSPAYPLFYSAQQSRFFQPQTHQNQSNSSSS
SSSNFPPPFWTSSGHYPPSSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400016306
Transcript Infomation

pacid=37471524 locus=PGSC0003DMG400006369 ID=PGSC0003DMT400016306.v4.03 annot-version=v4.03
Sequence

ATGTGGTTATTAAAGGTGGCGAATCAAGGAGATTCCGGCGAGCATGACAGAAATCTGTCG
ACAGCAGGTGATTCAGAAACTACAACCAATGAAGGAATTCCTCAACCGTATGAACAATCG
CAATCTTTTGAAGAAATGTTACAGCAACAAATACAGCAAGAAACAGAGTATTTGATGTCG
GAATCGGCTAATCCGATGTATACAGGGTATAGTCAGTCGAGGGATATGTCGGAAATGGTG
ACGGCGTTGACGCATGTGGTTTCGGGTCGGAGAGAGGGAGAGTGGGGTTACAGGCCGGAT
ATTAGCGGTGTTACGACTTCGTTTGTTGGTGGTGGTGGTGGTTCGGGGAGTATTTATTCG
GCGAATTCACCGTCTTCTTCGAGTTCAGGATCATGGGCTGGACAGAAAAGAAGACGCGAT
CAAGAAGAAAGTGTTACTGGAGAAAGGGGTTATGGAGGTATTAGGGAATTTAAAAATGGA
GAACCATCTTCCTCTGTTAAGCCTGAAGAAGATACAAGCCTGGCAGCACCACAAACGAGC
AGCGTATCAACCACTGCAGCGCAGACACCACCGCAACCAGCGGAAGTAACAGGTGAAGAA
ACAGGGGAGAGGAAGAGGAGATACAGAGGAGTAAGACAGAGACCATGGGGGAAATGGGCA
GCAGAGATAAGAGATCCACATAAAGCAGCAAGAGTTTGGTTAGGCACATTTGATACAGCA
GAAGCAGCCGCTAAAGCTTATGATGACGCCGCTCTTAGATTCAGAGGAAACAGAGCTAAA
CTCAATTTCCCTGAAAACGTCCGATTATTACCACAACAACAGCCCACAACAAGATTAGCC
ATTTCAACCACAGCACCAGCACCAGCAGCTTCGCGGTTCCAACTAATGTCTGCAGCATCA
ATGCGATCACCATCACCATTTTTTCAATCACATAATCAACCTCCGCATCAACCTCAGCAG
CAACAGCTTTTTCAGAGCTCAGATATGGCTAGAGATTATTGGGAATACTCACAATTACTT
CAAAATCCAATAGATTTCCATGGAGGACAACAATCATCATCTTTGTTAGAACAAATGTTA
TTAGCTTCATCATTGGGAGTGTTGCATTCACATACATTTCCTTCTTCTTCATCTTCTTCG
TTAGCAACTTCTGCAGCTTCTTCCACTACTTCCCCTGCATATCCCCTGTTTTACTCTGCT
CAACAATCACGCTTCTTTCAGCCACAAACTCATCAAAATCAAAGCAATAGCAGTAGCAGC
AGCAGCTCCAATTTTCCTCCACCTTTTTGGACTAGCTCCGGCCACTACCCACCTTCTTCT
AGCTAA